From 207c96d5e28ad84f3ac5a62fbdc090e5d290cf08 Mon Sep 17 00:00:00 2001 From: Constantin Pape <constantin.pape@iwr.uni-heidelberg.de> Date: Tue, 4 Feb 2020 21:54:54 +0100 Subject: [PATCH] Add raw data with different chunk sizes for performance tests --- .../1.0.0/images/sbem-6dpf-1-whole-raw-1.xml | 42 +++++++++++++++++++ .../1.0.0/images/sbem-6dpf-1-whole-raw-2.xml | 42 +++++++++++++++++++ .../1.0.0/images/sbem-6dpf-1-whole-raw-3.xml | 42 +++++++++++++++++++ 3 files changed, 126 insertions(+) create mode 100644 data/test_n5/1.0.0/images/sbem-6dpf-1-whole-raw-1.xml create mode 100644 data/test_n5/1.0.0/images/sbem-6dpf-1-whole-raw-2.xml create mode 100644 data/test_n5/1.0.0/images/sbem-6dpf-1-whole-raw-3.xml diff --git a/data/test_n5/1.0.0/images/sbem-6dpf-1-whole-raw-1.xml b/data/test_n5/1.0.0/images/sbem-6dpf-1-whole-raw-1.xml new file mode 100644 index 0000000..35c865a --- /dev/null +++ b/data/test_n5/1.0.0/images/sbem-6dpf-1-whole-raw-1.xml @@ -0,0 +1,42 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>1</id> + <name>1</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>channel 1</name> + <size>3438 3240 2854</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.08 0.08 0.1</size> + </voxelSize> + <attributes> + <channel>1</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + <ImageLoader format="bdv.n5.s3"> + <Key>rawdata/sbem-6dpf-1-whole-raw-1.n5</Key> + <ServiceEndpoint>https://s3.embl.de</ServiceEndpoint> + <BucketName>platybrowser</BucketName> + <SigningRegion>us-west-2</SigningRegion> + </ImageLoader> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.08 0.0 0.0 0.0 0.0 0.08 0.0 0.0 0.0 0.0 0.1 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/test_n5/1.0.0/images/sbem-6dpf-1-whole-raw-2.xml b/data/test_n5/1.0.0/images/sbem-6dpf-1-whole-raw-2.xml new file mode 100644 index 0000000..728b57f --- /dev/null +++ b/data/test_n5/1.0.0/images/sbem-6dpf-1-whole-raw-2.xml @@ -0,0 +1,42 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>1</id> + <name>1</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>channel 1</name> + <size>3438 3240 2854</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.08 0.08 0.1</size> + </voxelSize> + <attributes> + <channel>1</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + <ImageLoader format="bdv.n5.s3"> + <Key>rawdata/sbem-6dpf-1-whole-raw-2.n5</Key> + <ServiceEndpoint>https://s3.embl.de</ServiceEndpoint> + <BucketName>platybrowser</BucketName> + <SigningRegion>us-west-2</SigningRegion> + </ImageLoader> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.08 0.0 0.0 0.0 0.0 0.08 0.0 0.0 0.0 0.0 0.1 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/test_n5/1.0.0/images/sbem-6dpf-1-whole-raw-3.xml b/data/test_n5/1.0.0/images/sbem-6dpf-1-whole-raw-3.xml new file mode 100644 index 0000000..c31a24a --- /dev/null +++ b/data/test_n5/1.0.0/images/sbem-6dpf-1-whole-raw-3.xml @@ -0,0 +1,42 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>1</id> + <name>1</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>channel 1</name> + <size>3438 3240 2854</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.08 0.08 0.1</size> + </voxelSize> + <attributes> + <channel>1</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + <ImageLoader format="bdv.n5.s3"> + <Key>rawdata/sbem-6dpf-1-whole-raw-3.n5</Key> + <ServiceEndpoint>https://s3.embl.de</ServiceEndpoint> + <BucketName>platybrowser</BucketName> + <SigningRegion>us-west-2</SigningRegion> + </ImageLoader> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.08 0.0 0.0 0.0 0.0 0.08 0.0 0.0 0.0 0.0 0.1 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> -- GitLab