diff --git a/data/0.6.5/tables/prospr-6dpf-1-whole-virtual-cells-labels/default.csv b/data/0.6.5/tables/prospr-6dpf-1-whole-virtual-cells-labels/default.csv deleted file mode 120000 index f23c6eeb5a69a19a225da74c4c391a730d392cfd..0000000000000000000000000000000000000000 --- a/data/0.6.5/tables/prospr-6dpf-1-whole-virtual-cells-labels/default.csv +++ /dev/null @@ -1 +0,0 @@ -../../../0.6.4/tables/prospr-6dpf-1-whole-virtual-cells-labels/default.csv \ No newline at end of file diff --git a/data/0.6.5/tables/prospr-6dpf-1-whole-virtual-cells-labels/profile_clust_curated.csv b/data/0.6.5/tables/prospr-6dpf-1-whole-virtual-cells-labels/profile_clust_curated.csv deleted file mode 120000 index 35a84fd8754a4c72eaf9f5f4ae20c0a0497bcdfe..0000000000000000000000000000000000000000 --- a/data/0.6.5/tables/prospr-6dpf-1-whole-virtual-cells-labels/profile_clust_curated.csv +++ /dev/null @@ -1 +0,0 @@ -../../../0.6.4/tables/prospr-6dpf-1-whole-virtual-cells-labels/profile_clust_curated.csv \ No newline at end of file diff --git a/data/0.6.5/tables/prospr-6dpf-1-whole-virtual-cells-labels/additional_tables.txt b/data/0.6.5/tables/prospr-6dpf-1-whole-virtual-cells/additional_tables.txt similarity index 100% rename from data/0.6.5/tables/prospr-6dpf-1-whole-virtual-cells-labels/additional_tables.txt rename to data/0.6.5/tables/prospr-6dpf-1-whole-virtual-cells/additional_tables.txt diff --git a/data/0.6.5/tables/prospr-6dpf-1-whole-virtual-cells/default.csv b/data/0.6.5/tables/prospr-6dpf-1-whole-virtual-cells/default.csv new file mode 120000 index 0000000000000000000000000000000000000000..7f9c2184cad7479957149d03702cf2519fddd94f --- /dev/null +++ b/data/0.6.5/tables/prospr-6dpf-1-whole-virtual-cells/default.csv @@ -0,0 +1 @@ +../../../0.6.4/tables/prospr-6dpf-1-whole-virtual-cells/default.csv \ No newline at end of file diff --git a/data/0.6.5/tables/prospr-6dpf-1-whole-virtual-cells/profile_clust_curated.csv b/data/0.6.5/tables/prospr-6dpf-1-whole-virtual-cells/profile_clust_curated.csv new file mode 120000 index 0000000000000000000000000000000000000000..738c7fb252c3c48f7e13e6700738d6c8aa40f6b4 --- /dev/null +++ b/data/0.6.5/tables/prospr-6dpf-1-whole-virtual-cells/profile_clust_curated.csv @@ -0,0 +1 @@ +../../../0.6.4/tables/prospr-6dpf-1-whole-virtual-cells/profile_clust_curated.csv \ No newline at end of file diff --git a/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells-labels/additional_tables.txt b/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells/additional_tables.txt similarity index 100% rename from data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells-labels/additional_tables.txt rename to data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells/additional_tables.txt diff --git a/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells-labels/cells_to_nuclei.csv b/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells/cells_to_nuclei.csv similarity index 100% rename from data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells-labels/cells_to_nuclei.csv rename to data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells/cells_to_nuclei.csv diff --git a/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells-labels/default.csv b/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells/default.csv similarity index 100% rename from data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells-labels/default.csv rename to data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells/default.csv diff --git a/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells-labels/extrapolated_intensity_correction.csv b/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells/extrapolated_intensity_correction.csv similarity index 100% rename from data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells-labels/extrapolated_intensity_correction.csv rename to data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells/extrapolated_intensity_correction.csv diff --git a/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells-labels/ganglia_ids.csv b/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells/ganglia_ids.csv similarity index 100% rename from data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells-labels/ganglia_ids.csv rename to data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells/ganglia_ids.csv diff --git a/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells-labels/gene_clusters.csv b/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells/gene_clusters.csv similarity index 100% rename from data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells-labels/gene_clusters.csv rename to data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells/gene_clusters.csv diff --git a/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells-labels/genes.csv b/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells/genes.csv similarity index 100% rename from data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells-labels/genes.csv rename to data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells/genes.csv diff --git a/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells-labels/morphology.csv b/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells/morphology.csv similarity index 100% rename from data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells-labels/morphology.csv rename to data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells/morphology.csv diff --git a/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells-labels/regions.csv b/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells/regions.csv similarity index 100% rename from data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells-labels/regions.csv rename to data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells/regions.csv diff --git a/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells-labels/vc_assignments.csv b/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells/vc_assignments.csv similarity index 100% rename from data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells-labels/vc_assignments.csv rename to data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cells/vc_assignments.csv diff --git a/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-chromatin-labels/default.csv b/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-chromatin-labels/default.csv deleted file mode 120000 index f59fdd2b2a4db95b9b48e36c11c104741f3a687b..0000000000000000000000000000000000000000 --- a/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-chromatin-labels/default.csv +++ /dev/null @@ -1 +0,0 @@ -../../../0.6.4/tables/sbem-6dpf-1-whole-segmented-chromatin-labels/default.csv \ No newline at end of file diff --git a/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-chromatin/default.csv b/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-chromatin/default.csv new file mode 120000 index 0000000000000000000000000000000000000000..f0ac04e5336080ede52de2668f4eaf51aa55da90 --- /dev/null +++ b/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-chromatin/default.csv @@ -0,0 +1 @@ +../../../0.6.4/tables/sbem-6dpf-1-whole-segmented-chromatin/default.csv \ No newline at end of file diff --git a/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cilia-labels/default.csv b/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cilia-labels/default.csv deleted file mode 120000 index 501a9807352995c9c2ae8748711802c190756b22..0000000000000000000000000000000000000000 --- a/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cilia-labels/default.csv +++ /dev/null @@ -1 +0,0 @@ -../../../0.6.4/tables/sbem-6dpf-1-whole-segmented-cilia-labels/default.csv \ No newline at end of file diff --git a/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cilia-labels/morphology.csv b/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cilia-labels/morphology.csv deleted file mode 120000 index 07d56c7f6f70c7d3c017ad48dbbf1848b97a9d16..0000000000000000000000000000000000000000 --- a/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cilia-labels/morphology.csv +++ /dev/null @@ -1 +0,0 @@ -../../../0.6.4/tables/sbem-6dpf-1-whole-segmented-cilia-labels/morphology.csv \ No newline at end of file diff --git a/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cilia-labels/additional_tables.txt b/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cilia/additional_tables.txt similarity index 100% rename from data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cilia-labels/additional_tables.txt rename to data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cilia/additional_tables.txt diff --git a/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cilia-labels/cell_mapping.csv b/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cilia/cell_mapping.csv similarity index 100% rename from data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cilia-labels/cell_mapping.csv rename to data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cilia/cell_mapping.csv diff --git a/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cilia/default.csv b/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cilia/default.csv new file mode 120000 index 0000000000000000000000000000000000000000..1f4594fc494c5ca560aeba7f67356f61659ace6a --- /dev/null +++ b/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cilia/default.csv @@ -0,0 +1 @@ +../../../0.6.4/tables/sbem-6dpf-1-whole-segmented-cilia/default.csv \ No newline at end of file diff --git a/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cilia/morphology.csv b/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cilia/morphology.csv new file mode 120000 index 0000000000000000000000000000000000000000..b2b33a73753f29a76ae02a840acaba4d94b16996 --- /dev/null +++ b/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-cilia/morphology.csv @@ -0,0 +1 @@ +../../../0.6.4/tables/sbem-6dpf-1-whole-segmented-cilia/morphology.csv \ No newline at end of file diff --git a/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-ganglia-labels/default.csv b/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-ganglia-labels/default.csv deleted file mode 120000 index b2365c85b664037e693aa631e710ee711b10cf0e..0000000000000000000000000000000000000000 --- a/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-ganglia-labels/default.csv +++ /dev/null @@ -1 +0,0 @@ -../../../rawdata/tables/sbem-6dpf-1-whole-segmented-ganglia-labels/default.csv \ No newline at end of file diff --git a/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-ganglia-labels/additional_tables.txt b/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-ganglia/additional_tables.txt similarity index 100% rename from data/0.6.5/tables/sbem-6dpf-1-whole-segmented-ganglia-labels/additional_tables.txt rename to data/0.6.5/tables/sbem-6dpf-1-whole-segmented-ganglia/additional_tables.txt diff --git a/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-ganglia/default.csv b/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-ganglia/default.csv new file mode 120000 index 0000000000000000000000000000000000000000..771b52d9d79d7ac187efcff216eef35c81d95e88 --- /dev/null +++ b/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-ganglia/default.csv @@ -0,0 +1 @@ +../../../rawdata/tables/sbem-6dpf-1-whole-segmented-ganglia/default.csv \ No newline at end of file diff --git a/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-ganglia-labels/ganglia_ids.csv b/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-ganglia/ganglia_ids.csv similarity index 100% rename from data/0.6.5/tables/sbem-6dpf-1-whole-segmented-ganglia-labels/ganglia_ids.csv rename to data/0.6.5/tables/sbem-6dpf-1-whole-segmented-ganglia/ganglia_ids.csv diff --git a/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/default.csv b/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/default.csv deleted file mode 120000 index 60df4ef889231a80f107bbeabf435542ac978f49..0000000000000000000000000000000000000000 --- a/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/default.csv +++ /dev/null @@ -1 +0,0 @@ -../../../0.0.0/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/default.csv \ No newline at end of file diff --git a/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/extrapolated_intensity_correction.csv b/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/extrapolated_intensity_correction.csv deleted file mode 120000 index e5dd2bb00d62407b17335d3dccfb372e0032a875..0000000000000000000000000000000000000000 --- a/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/extrapolated_intensity_correction.csv +++ /dev/null @@ -1 +0,0 @@ -../../../0.6.0/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/extrapolated_intensity_correction.csv \ No newline at end of file diff --git a/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/morphology.csv b/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/morphology.csv deleted file mode 120000 index 7226fece60aa2373b04b94f080c214d9a45e9ef7..0000000000000000000000000000000000000000 --- a/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/morphology.csv +++ /dev/null @@ -1 +0,0 @@ -../../../0.0.0/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/morphology.csv \ No newline at end of file diff --git a/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/additional_tables.txt b/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-nuclei/additional_tables.txt similarity index 100% rename from data/0.6.5/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/additional_tables.txt rename to data/0.6.5/tables/sbem-6dpf-1-whole-segmented-nuclei/additional_tables.txt diff --git a/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-nuclei/default.csv b/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-nuclei/default.csv new file mode 120000 index 0000000000000000000000000000000000000000..17aa52731012db50b6aa691a39bb37458fb1b3be --- /dev/null +++ b/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-nuclei/default.csv @@ -0,0 +1 @@ +../../../0.0.0/tables/sbem-6dpf-1-whole-segmented-nuclei/default.csv \ No newline at end of file diff --git a/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-nuclei/extrapolated_intensity_correction.csv b/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-nuclei/extrapolated_intensity_correction.csv new file mode 120000 index 0000000000000000000000000000000000000000..2e22b04fc7818e5de8253fd59e54eed0f0aaa04b --- /dev/null +++ b/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-nuclei/extrapolated_intensity_correction.csv @@ -0,0 +1 @@ +../../../0.6.0/tables/sbem-6dpf-1-whole-segmented-nuclei/extrapolated_intensity_correction.csv \ No newline at end of file diff --git a/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-nuclei/morphology.csv b/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-nuclei/morphology.csv new file mode 120000 index 0000000000000000000000000000000000000000..7b3040f96dd35813b8562037c38c165555d5566a --- /dev/null +++ b/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-nuclei/morphology.csv @@ -0,0 +1 @@ +../../../0.0.0/tables/sbem-6dpf-1-whole-segmented-nuclei/morphology.csv \ No newline at end of file diff --git a/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-tissue-labels/default.csv b/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-tissue-labels/default.csv deleted file mode 120000 index 17818e3db23162de9b682b0d0a5fd1318abe5366..0000000000000000000000000000000000000000 --- a/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-tissue-labels/default.csv +++ /dev/null @@ -1 +0,0 @@ -../../../0.6.4/tables/sbem-6dpf-1-whole-segmented-tissue-labels/default.csv \ No newline at end of file diff --git a/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-tissue/default.csv b/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-tissue/default.csv new file mode 120000 index 0000000000000000000000000000000000000000..758e56b42597f54aefbe796895238d8bd73bd2e9 --- /dev/null +++ b/data/0.6.5/tables/sbem-6dpf-1-whole-segmented-tissue/default.csv @@ -0,0 +1 @@ +../../../0.6.4/tables/sbem-6dpf-1-whole-segmented-tissue/default.csv \ No newline at end of file