From 62bb40fb02a31bc04b213464500ae901299d2f7d Mon Sep 17 00:00:00 2001 From: Kimberly Meechan <kimberly.meechan@embl.de> Date: Wed, 29 Jan 2020 09:56:39 +0100 Subject: [PATCH] add back numpy thread setting --- scripts/extension/attributes/morphology_impl.py | 7 ++----- 1 file changed, 2 insertions(+), 5 deletions(-) diff --git a/scripts/extension/attributes/morphology_impl.py b/scripts/extension/attributes/morphology_impl.py index da9cf6a..acf192d 100644 --- a/scripts/extension/attributes/morphology_impl.py +++ b/scripts/extension/attributes/morphology_impl.py @@ -1,13 +1,10 @@ from datetime import datetime -# TODO - uncomment this part # this is a task called by multiple processes, # so we need to restrict the number of threads used by numpy -# from cluster_tools.utils.numpy_utils import set_numpy_threads -# set_numpy_threads(1) -from tmp.numpy_utils import set_numpy_threads - +from cluster_tools.utils.numpy_utils import set_numpy_threads set_numpy_threads(1) + import numpy as np import vigra -- GitLab