diff --git a/data/0.6.2/images/images.json b/data/0.6.2/images/images.json new file mode 100644 index 0000000000000000000000000000000000000000..3788a8e89aa886d8a269ad2b8716bc5449ea8557 --- /dev/null +++ b/data/0.6.2/images/images.json @@ -0,0 +1,1820 @@ +{ + "prospr-6dpf-1-whole-ache": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-ache.xml" + } + }, + "prospr-6dpf-1-whole-allcr1": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-allcr1.xml" + } + }, + "prospr-6dpf-1-whole-allcr2": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-allcr2.xml" + } + }, + "prospr-6dpf-1-whole-anpra": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-anpra.xml" + } + }, + "prospr-6dpf-1-whole-anprb": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-anprb.xml" + } + }, + "prospr-6dpf-1-whole-ap2": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-ap2.xml" + } + }, + "prospr-6dpf-1-whole-arx": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-arx.xml" + } + }, + "prospr-6dpf-1-whole-ascb": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-ascb.xml" + } + }, + "prospr-6dpf-1-whole-asci": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-asci.xml" + } + }, + "prospr-6dpf-1-whole-ascii": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-ascii.xml" + } + }, + "prospr-6dpf-1-whole-ash": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-ash.xml" + } + }, + "prospr-6dpf-1-whole-asicalpha": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-asicalpha.xml" + } + }, + "prospr-6dpf-1-whole-ato2": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-ato2.xml" + } + }, + "prospr-6dpf-1-whole-baiap": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-baiap.xml" + } + }, + "prospr-6dpf-1-whole-barh1": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-barh1.xml" + } + }, + "prospr-6dpf-1-whole-bca1": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-bca1.xml" + } + }, + "prospr-6dpf-1-whole-beta3": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-beta3.xml" + } + }, + "prospr-6dpf-1-whole-bmpr1": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-bmpr1.xml" + } + }, + "prospr-6dpf-1-whole-boule-like": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-boule-like.xml" + } + }, + "prospr-6dpf-1-whole-brn124": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-brn124.xml" + } + }, + "prospr-6dpf-1-whole-brn3a": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-brn3a.xml" + } + }, + "prospr-6dpf-1-whole-bsx": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-bsx.xml" + } + }, + "prospr-6dpf-1-whole-cal2": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-cal2.xml" + } + }, + "prospr-6dpf-1-whole-calexcitin2": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-calexcitin2.xml" + } + }, + "prospr-6dpf-1-whole-calmodulin": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-calmodulin.xml" + } + }, + "prospr-6dpf-1-whole-catl": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-catl.xml" + } + }, + "prospr-6dpf-1-whole-ccvd": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-ccvd.xml" + } + }, + "prospr-6dpf-1-whole-cepu1": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-cepu1.xml" + } + }, + "prospr-6dpf-1-whole-chat": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-chat.xml" + } + }, + "prospr-6dpf-1-whole-chx10": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-chx10.xml" + } + }, + "prospr-6dpf-1-whole-cnga": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-cnga.xml" + } + }, + "prospr-6dpf-1-whole-co1a1": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-co1a1.xml" + } + }, + "prospr-6dpf-1-whole-coe": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-coe.xml" + } + }, + "prospr-6dpf-1-whole-dach": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-dach.xml" + } + }, + "prospr-6dpf-1-whole-dbhlike": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { 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"Storage": { + "local": "local/prospr-6dpf-1-whole-edu42to48.xml" + } + }, + "prospr-6dpf-1-whole-edu4to5at6dpf": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-edu4to5at6dpf.xml" + } + }, + "prospr-6dpf-1-whole-edu5to6at6dpf": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-edu5to6at6dpf.xml" + } + }, + "prospr-6dpf-1-whole-elav": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-elav.xml" + } + }, + "prospr-6dpf-1-whole-eve": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-eve.xml" + } + }, + "prospr-6dpf-1-whole-eya": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-eya.xml" + } + }, + "prospr-6dpf-1-whole-fezf": { + "Color": "Magenta", + "MaxValue": 1000, + 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"local/prospr-6dpf-1-whole-virtual-cells.xml" + }, + "TableFolder": "tables/prospr-6dpf-1-whole-virtual-cells" + }, + "prospr-6dpf-1-whole-wnt16": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-wnt16.xml" + } + }, + "prospr-6dpf-1-whole-wnt5": { + "Color": "Magenta", + "MaxValue": 1000, + "MinValue": 0, + "Storage": { + "local": "local/prospr-6dpf-1-whole-wnt5.xml" + } + }, + "sbem-6dpf-1-whole-raw": { + "Color": "White", + "MaxValue": 255, + "MinValue": 0, + "Storage": { + "local": "local/sbem-6dpf-1-whole-raw.xml" + } + }, + "sbem-6dpf-1-whole-segmented-cells": { + "ColorMap": "Glasbey", + "Storage": { + "local": "local/sbem-6dpf-1-whole-segmented-cells.xml" + }, + "TableFolder": "tables/sbem-6dpf-1-whole-segmented-cells" + }, + "sbem-6dpf-1-whole-segmented-chromatin": { + "ColorMap": "Glasbey", + "Storage": { + "local": "local/sbem-6dpf-1-whole-segmented-chromatin.xml" + }, + "TableFolder": 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"sbem-6dpf-1-whole-segmented-nuclei": { + "ColorMap": "Glasbey", + "Storage": { + "local": "local/sbem-6dpf-1-whole-segmented-nuclei.xml" + }, + "TableFolder": "tables/sbem-6dpf-1-whole-segmented-nuclei" + }, + "sbem-6dpf-1-whole-segmented-outside": { + "Color": "White", + "MaxValue": 1, + "MinValue": 0, + "Storage": { + "local": "local/sbem-6dpf-1-whole-segmented-outside.xml" + } + }, + "sbem-6dpf-1-whole-segmented-resin": { + "Color": "White", + "MaxValue": 1, + "MinValue": 0, + "Storage": { + "local": "local/sbem-6dpf-1-whole-segmented-resin.xml" + } + }, + "sbem-6dpf-1-whole-segmented-tissue": { + "ColorMap": "Glasbey", + "Storage": { + "local": "local/sbem-6dpf-1-whole-segmented-tissue.xml" + }, + "TableFolder": "tables/sbem-6dpf-1-whole-segmented-tissue" + } +} \ No newline at end of file diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-ache.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-ache.xml new file mode 100644 index 0000000000000000000000000000000000000000..5d186595310b86d9253dad3355362ef76f21e7ee --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-ache.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-ache.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-allcr1.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-allcr1.xml new file mode 100644 index 0000000000000000000000000000000000000000..1223b80a4a6852b9afa15bbf2ec0a3943c47406e --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-allcr1.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-allcr1.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-allcr2.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-allcr2.xml new file mode 100644 index 0000000000000000000000000000000000000000..b4c10d497f9a04e5cae96a392bd4d3cd9448fa19 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-allcr2.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-allcr2.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-anpra.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-anpra.xml new file mode 100644 index 0000000000000000000000000000000000000000..8c10d30e7663be1a6f1bbe9d170fcf52a87392e7 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-anpra.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-anpra.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-anprb.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-anprb.xml new file mode 100644 index 0000000000000000000000000000000000000000..f3d3c945c32fd99a58c99a9cd3c6f97e718ef3d7 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-anprb.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-anprb.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/prospr-6dpf-1-whole-ANPRB-MED.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-ap2.xml similarity index 91% rename from data/0.6.2/images/prospr-6dpf-1-whole-ANPRB-MED.xml rename to data/0.6.2/images/local/prospr-6dpf-1-whole-ap2.xml index c300b5044254c3ebd8687212ef2e87b16e033d1c..40bd5cb0b278bdd4f95c8088e23f77bfd7b04493 100644 --- a/data/0.6.2/images/prospr-6dpf-1-whole-ANPRB-MED.xml +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-ap2.xml @@ -2,7 +2,7 @@ <BasePath type="relative">.</BasePath> <SequenceDescription> <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.5.4/images/prospr-6dpf-1-whole-ANPRB-MED.h5</hdf5> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-ap2.h5</hdf5> </ImageLoader> <ViewSetups> <Attributes name="channel"> diff --git a/data/0.6.2/images/prospr-6dpf-1-whole-AP2-MED.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-arx.xml similarity index 91% rename from data/0.6.2/images/prospr-6dpf-1-whole-AP2-MED.xml rename to data/0.6.2/images/local/prospr-6dpf-1-whole-arx.xml index 28a6e9168db70739ec59fec5125b7b48cecebae0..76a0b84a3a54d01c9db5d2dd87891664e169be1f 100644 --- a/data/0.6.2/images/prospr-6dpf-1-whole-AP2-MED.xml +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-arx.xml @@ -2,7 +2,7 @@ <BasePath type="relative">.</BasePath> <SequenceDescription> <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.5.4/images/prospr-6dpf-1-whole-AP2-MED.h5</hdf5> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-arx.h5</hdf5> </ImageLoader> <ViewSetups> <Attributes name="channel"> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-ascb.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-ascb.xml new file mode 100644 index 0000000000000000000000000000000000000000..222e4ee513119af0a6072477a7bc520a373d195e --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-ascb.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-ascb.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-asci.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-asci.xml new file mode 100644 index 0000000000000000000000000000000000000000..8a900b971a363f632e57c5e78d1dd04ac0533305 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-asci.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-asci.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-ascii.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-ascii.xml new file mode 100644 index 0000000000000000000000000000000000000000..26a81102238ec6ad3692ba46774606259b361d1e --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-ascii.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-ascii.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-ash.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-ash.xml new file mode 100644 index 0000000000000000000000000000000000000000..054383c63155dd22f8b403fad8717e87223da9f6 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-ash.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-ash.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-asicalpha.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-asicalpha.xml new file mode 100644 index 0000000000000000000000000000000000000000..5ea58cc43dae5af905eb842ecd04662ff708d864 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-asicalpha.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-asicalpha.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-ato2.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-ato2.xml new file mode 100644 index 0000000000000000000000000000000000000000..4d0c4cdbc1915118467c263bf6039efc1f0b2a8d --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-ato2.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-ato2.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-baiap.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-baiap.xml new file mode 100644 index 0000000000000000000000000000000000000000..fb04c9c44e949bfe8c2dfd1d62831921574da2f0 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-baiap.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-baiap.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-barh1.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-barh1.xml new file mode 100644 index 0000000000000000000000000000000000000000..488c5994de1ea18262456a3911d9a28168fc1b02 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-barh1.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-barh1.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-bca1.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-bca1.xml new file mode 100644 index 0000000000000000000000000000000000000000..d048a2bc2fe659a2c9cdb851951d070f6df0a65b --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-bca1.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-bca1.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-beta3.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-beta3.xml new file mode 100644 index 0000000000000000000000000000000000000000..8f9d90c03d7db3a43f97ba2ee78fb941077c1396 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-beta3.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-beta3.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-bmpr1.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-bmpr1.xml new file mode 100644 index 0000000000000000000000000000000000000000..847841287c1b5e53ab1cf963079cdbc5ab965958 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-bmpr1.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-bmpr1.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-boule-like.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-boule-like.xml new file mode 100644 index 0000000000000000000000000000000000000000..6d6f551286006b81e4f7548b117f4fd2ea680dc0 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-boule-like.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-boule-like.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-brn124.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-brn124.xml new file mode 100644 index 0000000000000000000000000000000000000000..237bf28f102a7e0b6cf534b02838bc6e711d64bb --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-brn124.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-brn124.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-brn3a.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-brn3a.xml new file mode 100644 index 0000000000000000000000000000000000000000..56f34ccb0e91741cd7d82b6a004bc3af61187211 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-brn3a.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-brn3a.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-bsx.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-bsx.xml new file mode 100644 index 0000000000000000000000000000000000000000..0ebb44781aa80ebedf484946fffeecc9dcfb5d44 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-bsx.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-bsx.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-cal2.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-cal2.xml new file mode 100644 index 0000000000000000000000000000000000000000..182d890caf9a836786f15573f0d1b4c1dd5ff575 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-cal2.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-cal2.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-calexcitin2.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-calexcitin2.xml new file mode 100644 index 0000000000000000000000000000000000000000..793ab548d2dc3491bbca9db54d6cb5ea6eb14474 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-calexcitin2.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-calexcitin2.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-calmodulin.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-calmodulin.xml new file mode 100644 index 0000000000000000000000000000000000000000..c3e77d4e1927fba45b98743c70dd73f7b0d9e62a --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-calmodulin.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-calmodulin.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-catl.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-catl.xml new file mode 100644 index 0000000000000000000000000000000000000000..23177e6dde06bd9ba47bc6ae2e12c71248cd375e --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-catl.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-catl.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-ccvd.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-ccvd.xml new file mode 100644 index 0000000000000000000000000000000000000000..2a0fa2c726125698b8bbbc41fa87ef3ec156c42a --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-ccvd.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-ccvd.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-cepu1.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-cepu1.xml new file mode 100644 index 0000000000000000000000000000000000000000..44ddf4df27d55b766923e585cd4931c09a595ba8 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-cepu1.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-cepu1.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-chat.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-chat.xml new file mode 100644 index 0000000000000000000000000000000000000000..d5e53cd4bf638001e70de71a9ac235d5eff02d71 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-chat.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-chat.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-chx10.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-chx10.xml new file mode 100644 index 0000000000000000000000000000000000000000..a60d5deed6a8c86b680ec212f66c102f9d567716 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-chx10.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-chx10.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-cnga.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-cnga.xml new file mode 100644 index 0000000000000000000000000000000000000000..8d3c250cf57b5335da29950df031d437140a76ed --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-cnga.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-cnga.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-co1a1.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-co1a1.xml new file mode 100644 index 0000000000000000000000000000000000000000..8cba70c29ecc451b01cab467720d2442110f1e8b --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-co1a1.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-co1a1.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-coe.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-coe.xml new file mode 100644 index 0000000000000000000000000000000000000000..2a3669e813cd9d7e77b475c999f147cff17fccb5 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-coe.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-coe.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-dach.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-dach.xml new file mode 100644 index 0000000000000000000000000000000000000000..64c2745f1fa679650cb98e85a3831a62a74abec9 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-dach.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-dach.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-dbhlike.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-dbhlike.xml new file mode 100644 index 0000000000000000000000000000000000000000..afafc02c6dc02c17c8f9888017a337beb5cdab16 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-dbhlike.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-dbhlike.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-dbx1.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-dbx1.xml new file mode 100644 index 0000000000000000000000000000000000000000..6d5c76208daca900015c211ae7ffb22506532491 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-dbx1.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-dbx1.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-delta.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-delta.xml new file mode 100644 index 0000000000000000000000000000000000000000..bff0fb3e1295fe0908e721926a0ebedb2ef401eb --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-delta.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-delta.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-dlx.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-dlx.xml new file mode 100644 index 0000000000000000000000000000000000000000..c3cfe5698e4d329d8b644724ba8160e09b376851 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-dlx.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-dlx.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-dopard2.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-dopard2.xml new file mode 100644 index 0000000000000000000000000000000000000000..222428aaa9a1650913a8e2479b415907dff565eb --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-dopard2.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-dopard2.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-edu3to4at6dpf.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-edu3to4at6dpf.xml new file mode 100644 index 0000000000000000000000000000000000000000..a093c7f0ec5d434f0e50465387bc4a5f8f5f327a --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-edu3to4at6dpf.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-edu3to4at6dpf.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-edu42to48.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-edu42to48.xml new file mode 100644 index 0000000000000000000000000000000000000000..3346a6569f0bc23f728f4089d432e116e5749f33 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-edu42to48.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-edu42to48.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-edu4to5at6dpf.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-edu4to5at6dpf.xml new file mode 100644 index 0000000000000000000000000000000000000000..fae64ead03d2355afaea59cb4f5921e16b3c645a --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-edu4to5at6dpf.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-edu4to5at6dpf.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-edu5to6at6dpf.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-edu5to6at6dpf.xml new file mode 100644 index 0000000000000000000000000000000000000000..7cb17baa7675d14d4cb9fa57f89303b995d6d4b7 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-edu5to6at6dpf.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-edu5to6at6dpf.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-elav.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-elav.xml new file mode 100644 index 0000000000000000000000000000000000000000..ee33318fc5cb35328b1821ad0427f6e1cf146f84 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-elav.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-elav.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-eve.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-eve.xml new file mode 100644 index 0000000000000000000000000000000000000000..636bb238097db77ee7d94b6b68ad219b2e50598f --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-eve.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-eve.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-eya.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-eya.xml new file mode 100644 index 0000000000000000000000000000000000000000..296692987315ced0972d25f65c7b8345612294c1 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-eya.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-eya.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-fezf.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-fezf.xml new file mode 100644 index 0000000000000000000000000000000000000000..12f5fb573d6db0fa7e1ec8ff457d62718e4e1d30 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-fezf.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-fezf.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-for.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-for.xml new file mode 100644 index 0000000000000000000000000000000000000000..3516430ed1fe5563224fbffa3cfb89865e0196aa --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-for.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-for.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-foxd3.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-foxd3.xml new file mode 100644 index 0000000000000000000000000000000000000000..e136dd5e6bcdde07747581bf6c557964cc8aabd5 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-foxd3.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-foxd3.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-foxn4.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-foxn4.xml new file mode 100644 index 0000000000000000000000000000000000000000..4e439528c11da61e009d6545f64cee5057496e72 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-foxn4.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-foxn4.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-fvri.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-fvri.xml new file mode 100644 index 0000000000000000000000000000000000000000..5117b17817d4f1138f98f99861416e557d81e116 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-fvri.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-fvri.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-fxl21.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-fxl21.xml new file mode 100644 index 0000000000000000000000000000000000000000..5f91eca764b4707a710eaea63f92d8f2abe29a1c --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-fxl21.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-fxl21.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-gad.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-gad.xml new file mode 100644 index 0000000000000000000000000000000000000000..f14fece3a54bdb85d0fa5ab39c0ac50ee2dbfeaa --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-gad.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-gad.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-gata123.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-gata123.xml new file mode 100644 index 0000000000000000000000000000000000000000..34a8f785b57f21d9e51aff44a0bb4e4ae4f6fc14 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-gata123.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-gata123.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-gcb.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-gcb.xml new file mode 100644 index 0000000000000000000000000000000000000000..50693ed06ad2ccd1aea8d26a578577d0c1abc90f --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-gcb.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-gcb.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-gcd.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-gcd.xml new file mode 100644 index 0000000000000000000000000000000000000000..2a4f1642c5887eb62e4a0358fef569b1022f1bd2 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-gcd.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-gcd.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-gdpd1.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-gdpd1.xml new file mode 100644 index 0000000000000000000000000000000000000000..fa05a6f4b008546170d73a9eecd9929803fc0812 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-gdpd1.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-gdpd1.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-globin-like.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-globin-like.xml new file mode 100644 index 0000000000000000000000000000000000000000..33c97c1cf737ca67db4b66fdb6abe2388178db04 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-globin-like.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-globin-like.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-glt1.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-glt1.xml new file mode 100644 index 0000000000000000000000000000000000000000..d68dad01fbd01724ad5b18f77bff7fccf53c7bfb --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-glt1.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-glt1.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-glyt.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-glyt.xml new file mode 100644 index 0000000000000000000000000000000000000000..d8eca5b5ddb9ee21698766354e0f2d5258b20392 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-glyt.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-glyt.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-gnrh.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-gnrh.xml new file mode 100644 index 0000000000000000000000000000000000000000..715c9490507e830f3e7d49effb90808d86f96db1 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-gnrh.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-gnrh.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-gnrhr.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-gnrhr.xml new file mode 100644 index 0000000000000000000000000000000000000000..7334fa41061f73801160ebfd776624fa3fbcc8a6 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-gnrhr.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-gnrhr.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-gpb.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-gpb.xml new file mode 100644 index 0000000000000000000000000000000000000000..21b1dee07687d56ca1f84a674a35df19d63c4a4e --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-gpb.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-gpb.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-gpcr2.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-gpcr2.xml new file mode 100644 index 0000000000000000000000000000000000000000..69fa1db7c732aa7a59ed6cc099d76ed07ce32fdf --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-gpcr2.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-gpcr2.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-gpcr203.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-gpcr203.xml new file mode 100644 index 0000000000000000000000000000000000000000..19d090d0459bf6de846f2932319b90920d3015ed --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-gpcr203.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-gpcr203.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-gpcr209.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-gpcr209.xml new file mode 100644 index 0000000000000000000000000000000000000000..fd5efe96a508a9355f2d8aa3225158d81696d5b6 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-gpcr209.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-gpcr209.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-gpcr210.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-gpcr210.xml new file mode 100644 index 0000000000000000000000000000000000000000..f19b71482c0fc3ee2d06bb37c613c1317f0067e8 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-gpcr210.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-gpcr210.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-gpcr32.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-gpcr32.xml new file mode 100644 index 0000000000000000000000000000000000000000..eef3b4292b7577dae3e3a2163e659a648a5e9fd3 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-gpcr32.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-gpcr32.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-gppcr21.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-gppcr21.xml new file mode 100644 index 0000000000000000000000000000000000000000..21130568a33e093dbb31a2f09e4bb6c570392476 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-gppcr21.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-gppcr21.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-grik3.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-grik3.xml new file mode 100644 index 0000000000000000000000000000000000000000..13b9411d6ef989e1afdcbf26a48b27bff66c5677 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-grik3.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-grik3.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-grm7.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-grm7.xml new file mode 100644 index 0000000000000000000000000000000000000000..9c381366198acc674a2ff50fe9dc963976c0bb09 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-grm7.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-grm7.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-gsx.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-gsx.xml new file mode 100644 index 0000000000000000000000000000000000000000..7a2702c557c498c1240b3c5654d58bb4454ac856 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-gsx.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-gsx.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-gucy.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-gucy.xml new file mode 100644 index 0000000000000000000000000000000000000000..67705eaf41ff6b8a7cb3e1589ce859ca389025a4 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-gucy.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-gucy.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-hand.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-hand.xml new file mode 100644 index 0000000000000000000000000000000000000000..79341a9ee91390f0b27df22902f069c73aa92657 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-hand.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-hand.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-hb9.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-hb9.xml new file mode 100644 index 0000000000000000000000000000000000000000..6dcc5739fb70f35f813a41d8db3ac26b01a87e39 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-hb9.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-hb9.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-hcn1.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-hcn1.xml new file mode 100644 index 0000000000000000000000000000000000000000..59b8932e0301b5ba514d6d5d7461cfedd647a7e4 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-hcn1.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-hcn1.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-hnf6.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-hnf6.xml new file mode 100644 index 0000000000000000000000000000000000000000..4fddd6f1fca57c2327f1ad1fd853dee15154619c --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-hnf6.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-hnf6.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-hox1.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-hox1.xml new file mode 100644 index 0000000000000000000000000000000000000000..23ed8b186c266d471d008944c10b7c4b9c005c7b --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-hox1.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-hox1.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-hox4.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-hox4.xml new file mode 100644 index 0000000000000000000000000000000000000000..a89990a42aa985ba2a5c2ef8f6cb92bb1e5a0e05 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-hox4.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-hox4.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-hox7.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-hox7.xml new file mode 100644 index 0000000000000000000000000000000000000000..7be1cd5fc8f6fd456af45b934c50075d6f632d7a --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-hox7.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-hox7.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-hr38.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-hr38.xml new file mode 100644 index 0000000000000000000000000000000000000000..f3faa7e9a887f065c47c2be4701b8b1d043a864b --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-hr38.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-hr38.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-irx2546.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-irx2546.xml new file mode 100644 index 0000000000000000000000000000000000000000..449504ad345f9f24ef6e313ad0b13f0f25d9bd06 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-irx2546.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-irx2546.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-irx6.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-irx6.xml new file mode 100644 index 0000000000000000000000000000000000000000..ba2dff59d63f0fdff78f13fd9a30bc9c7fcff46e --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-irx6.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-irx6.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-isl.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-isl.xml new file mode 100644 index 0000000000000000000000000000000000000000..2daf437eb50bc76364f88ff5acc22857e8899b79 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-isl.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-isl.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-jkip3.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-jkip3.xml new file mode 100644 index 0000000000000000000000000000000000000000..46bf0ddadffdabd9c5effb4a3ce6d31fc4fd5de8 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-jkip3.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-jkip3.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-junctophilin1.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-junctophilin1.xml new file mode 100644 index 0000000000000000000000000000000000000000..8ff987bb0ea8ec81be9b42dc133212ad96161b8f --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-junctophilin1.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-junctophilin1.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-kanl3.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-kanl3.xml new file mode 100644 index 0000000000000000000000000000000000000000..3e6cbc6ff54329fbbd0a549335729fb58908514c --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-kanl3.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-kanl3.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-kv33b.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-kv33b.xml new file mode 100644 index 0000000000000000000000000000000000000000..a213bc44a24737ac9ac9232144735847f0e8c777 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-kv33b.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-kv33b.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-kv33e.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-kv33e.xml new file mode 100644 index 0000000000000000000000000000000000000000..1cfa1a3073d79e41511ef700f071ecd2dcf0dca6 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-kv33e.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-kv33e.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-lbx1b.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-lbx1b.xml new file mode 100644 index 0000000000000000000000000000000000000000..5bc5472455a8cd64875848971c30c27cfe2bfe9f --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-lbx1b.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-lbx1b.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-leucin-rich.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-leucin-rich.xml new file mode 100644 index 0000000000000000000000000000000000000000..49b507feee529166cfe5721b2619b902971c7954 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-leucin-rich.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-leucin-rich.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-lhx15.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-lhx15.xml new file mode 100644 index 0000000000000000000000000000000000000000..c6d5ac660630a86bcbae8be0d2cbcda244ed5784 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-lhx15.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-lhx15.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-lhx2.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-lhx2.xml new file mode 100644 index 0000000000000000000000000000000000000000..b13f461751e02eeeceeb76c0b3d38c0565be1e02 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-lhx2.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-lhx2.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-lhx3.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-lhx3.xml new file mode 100644 index 0000000000000000000000000000000000000000..d47e677b030fbee714aa4779870d631b3fff15d6 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-lhx3.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-lhx3.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-lhx6.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-lhx6.xml new file mode 100644 index 0000000000000000000000000000000000000000..5303265d8f6d37a30d992424814fa19bbf4d8da8 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-lhx6.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-lhx6.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-lmo4.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-lmo4.xml new file mode 100644 index 0000000000000000000000000000000000000000..6ec156564fafa11dd2ad5902e7415901b10ec0da --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-lmo4.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-lmo4.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-lmx1.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-lmx1.xml new file mode 100644 index 0000000000000000000000000000000000000000..41ec6b1d2a05800afd46871e82c6c62a9be7ac5e --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-lmx1.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-lmx1.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-loc28250.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-loc28250.xml new file mode 100644 index 0000000000000000000000000000000000000000..12dd2d61cfbf6dc72b29771c80259c5fc4e7a233 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-loc28250.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-loc28250.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-loc5285ct.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-loc5285ct.xml new file mode 100644 index 0000000000000000000000000000000000000000..06000742fe8dc640fd2da7d92964c8ea009b3580 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-loc5285ct.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-loc5285ct.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-loc77859.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-loc77859.xml new file mode 100644 index 0000000000000000000000000000000000000000..0452b362ec8ffca25c1a4bb4adde44bc2042e2bc --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-loc77859.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-loc77859.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-loc8913nt.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-loc8913nt.xml new file mode 100644 index 0000000000000000000000000000000000000000..86d93a09e00a6605b6e585cf3a691c07d040593a --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-loc8913nt.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-loc8913nt.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-maf.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-maf.xml new file mode 100644 index 0000000000000000000000000000000000000000..a5444a5f1b07b9e36e2f148676d070bcc164eecc --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-maf.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-maf.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-mecom.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-mecom.xml new file mode 100644 index 0000000000000000000000000000000000000000..220d73439b6714b2ec6f2a6d734af90bbb03b487 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-mecom.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-mecom.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-mhcl4.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-mhcl4.xml new file mode 100644 index 0000000000000000000000000000000000000000..980ea382bfb428384323598c9a338be023e9760e --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-mhcl4.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-mhcl4.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-mitf.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-mitf.xml new file mode 100644 index 0000000000000000000000000000000000000000..46fb0c157ab014f0afe2ec581a0722e8c184701b --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-mitf.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-mitf.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-mrlc2.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-mrlc2.xml new file mode 100644 index 0000000000000000000000000000000000000000..4b2d0a640f6914d6a996a0da9d1d19c69efedcfc --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-mrlc2.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-mrlc2.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-msx.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-msx.xml new file mode 100644 index 0000000000000000000000000000000000000000..c2e8037fe9ea1efff6743fc272cd2b2863d50736 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-msx.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-msx.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-mthfsd.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-mthfsd.xml new file mode 100644 index 0000000000000000000000000000000000000000..c9c11f8f493dbb881af50f6d4a71d63bce93a0b4 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-mthfsd.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-mthfsd.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-munc22.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-munc22.xml new file mode 100644 index 0000000000000000000000000000000000000000..e5267a8e1697da4f0c1118df81991b9f20b14dc9 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-munc22.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-munc22.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-muncb.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-muncb.xml new file mode 100644 index 0000000000000000000000000000000000000000..1fec3b805fb81044cdfd50b3b483d5a7ca81edac --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-muncb.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-muncb.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-nachr.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-nachr.xml new file mode 100644 index 0000000000000000000000000000000000000000..048c2a57da85bf7b655fb9adef826c4244d6f3dd --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-nachr.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-nachr.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-nb5r3.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-nb5r3.xml new file mode 100644 index 0000000000000000000000000000000000000000..6c136ba3778a87c8751687424ec429a52a0ec197 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-nb5r3.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-nb5r3.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-ndus1.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-ndus1.xml new file mode 100644 index 0000000000000000000000000000000000000000..a322b971bac5e739d471bb76d8677a1b2dada0fb --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-ndus1.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-ndus1.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-neog.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-neog.xml new file mode 100644 index 0000000000000000000000000000000000000000..453d18dda1c770c12e108fab5f81d15aaab97e53 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-neog.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-neog.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-netrin.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-netrin.xml new file mode 100644 index 0000000000000000000000000000000000000000..597573f30c3e8122c14f884e475dbe103b409855 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-netrin.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-netrin.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-neurod.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-neurod.xml new file mode 100644 index 0000000000000000000000000000000000000000..7a5c970cbe2382590cae931488b54ab5ce8dadd8 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-neurod.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-neurod.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-ngb.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-ngb.xml new file mode 100644 index 0000000000000000000000000000000000000000..65019483ccb213ee979d632ec48d8051e5d580d6 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-ngb.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-ngb.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-ngn.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-ngn.xml new file mode 100644 index 0000000000000000000000000000000000000000..c718f924979ccb21ebd219b3645d1a54bd0e86ff --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-ngn.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-ngn.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-nk21.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-nk21.xml new file mode 100644 index 0000000000000000000000000000000000000000..6174f0c7977c74daefbe2e961373c7c5260bf85d --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-nk21.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-nk21.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-nk22.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-nk22.xml new file mode 100644 index 0000000000000000000000000000000000000000..7b28322728a545d0c9e07774b382f2c850c42999 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-nk22.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-nk22.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-nk6.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-nk6.xml new file mode 100644 index 0000000000000000000000000000000000000000..0101ac041db51a3ec73aa92167ec29b76aaf7e0d --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-nk6.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-nk6.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-nmdar.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-nmdar.xml new file mode 100644 index 0000000000000000000000000000000000000000..89d19b3a3e4e85621cb2b0bd5cfa4d6fcc34aa0c --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-nmdar.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-nmdar.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-noe1.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-noe1.xml new file mode 100644 index 0000000000000000000000000000000000000000..381b79fa675c949788bc24f1e57c0e3fa52f80ac --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-noe1.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-noe1.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-nompc3.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-nompc3.xml new file mode 100644 index 0000000000000000000000000000000000000000..b1442738de7f1b2f18e07f201338b79af664c3b2 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-nompc3.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-nompc3.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-non-muscle-mhc.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-non-muscle-mhc.xml new file mode 100644 index 0000000000000000000000000000000000000000..6d45d200c4d264d272174df9d57ffa2b716ceecc --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-non-muscle-mhc.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-non-muscle-mhc.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-nov2.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-nov2.xml new file mode 100644 index 0000000000000000000000000000000000000000..9a07de3941bb003eceeb8d2ca218ee28f958db75 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-nov2.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-nov2.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-nov29.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-nov29.xml new file mode 100644 index 0000000000000000000000000000000000000000..a37b9107a8b3c8f4d73b020a76d563b0f1a5db9b --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-nov29.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-nov29.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-npr1a.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-npr1a.xml new file mode 100644 index 0000000000000000000000000000000000000000..71d35510ff1f95e8ba01b5c876f24af7b3ed347f --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-npr1a.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-npr1a.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-ntrps.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-ntrps.xml new file mode 100644 index 0000000000000000000000000000000000000000..40cba59ea9efcee03d967cd86b9713f39aa83833 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-ntrps.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-ntrps.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-nucleolin.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-nucleolin.xml new file mode 100644 index 0000000000000000000000000000000000000000..4436802e759d899e5ed9bed6dbe4490040885c94 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-nucleolin.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-nucleolin.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-odo2.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-odo2.xml new file mode 100644 index 0000000000000000000000000000000000000000..616d83387142916ba27a077338f2027ebcdbdc2a --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-odo2.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-odo2.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-olig.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-olig.xml new file mode 100644 index 0000000000000000000000000000000000000000..85e0ee10dd21565f4e3367247f0b662146cff2db --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-olig.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-olig.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-olm2a.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-olm2a.xml new file mode 100644 index 0000000000000000000000000000000000000000..45018f733db80078158395ddb423a9cb5f026537 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-olm2a.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-olm2a.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-otp.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-otp.xml new file mode 100644 index 0000000000000000000000000000000000000000..9acdbb5038eef718f9f6c3994ad46f9bbfbc9d9c --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-otp.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-otp.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-p56.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-p56.xml new file mode 100644 index 0000000000000000000000000000000000000000..31ebd70c3401706982d1a027afb0b86b940e8d7c --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-p56.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-p56.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-paraxis.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-paraxis.xml new file mode 100644 index 0000000000000000000000000000000000000000..e3312422e92d37891af1ecd1c86af74dd9b1bca7 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-paraxis.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-paraxis.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-patched.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-patched.xml new file mode 100644 index 0000000000000000000000000000000000000000..84f8c0062049a964a2308fb7687e65d3069e7a2e --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-patched.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-patched.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-pax258.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-pax258.xml new file mode 100644 index 0000000000000000000000000000000000000000..47f55732a3a0e2403bce590e5c22e38b3acd544c --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-pax258.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-pax258.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-pax6.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-pax6.xml new file mode 100644 index 0000000000000000000000000000000000000000..9f6dbfead1e0db812995414e7553f4ad84f2801a --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-pax6.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-pax6.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-pcdh15.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-pcdh15.xml new file mode 100644 index 0000000000000000000000000000000000000000..cce06ece768846c5fc1f8169004b209f408a7ead --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-pcdh15.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-pcdh15.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-pde9.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-pde9.xml new file mode 100644 index 0000000000000000000000000000000000000000..106a7ee86bb9d675b4201297de1aa7ab18e20997 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-pde9.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-pde9.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-pdf.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-pdf.xml new file mode 100644 index 0000000000000000000000000000000000000000..98547fd7528c9723b9af5c4654a21185c569fc0a --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-pdf.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-pdf.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-pea3.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-pea3.xml new file mode 100644 index 0000000000000000000000000000000000000000..5d9f4a00c2287f6cdbfe986580e64a8a1a812e7b --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-pea3.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-pea3.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-pgam.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-pgam.xml new file mode 100644 index 0000000000000000000000000000000000000000..14d6d104517d5df15d9fec91feac3a6631fedfc1 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-pgam.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-pgam.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-phc2.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-phc2.xml new file mode 100644 index 0000000000000000000000000000000000000000..88cef479ae3916093f021e02e7060e4a53c8484f --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-phc2.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-phc2.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-phox2b.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-phox2b.xml new file mode 100644 index 0000000000000000000000000000000000000000..cc97205b5d15dab888e89bc217e6616f03233ac7 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-phox2b.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-phox2b.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-pikachu.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-pikachu.xml new file mode 100644 index 0000000000000000000000000000000000000000..c6192f57b17375678b77c14b075c8c12c234d97a --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-pikachu.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-pikachu.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-pitxb.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-pitxb.xml new file mode 100644 index 0000000000000000000000000000000000000000..3caf399762f0e94cd0c52e20b19af7190c9108e6 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-pitxb.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-pitxb.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-pkd1.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-pkd1.xml new file mode 100644 index 0000000000000000000000000000000000000000..4ecea44f8a9bc5e010af887b167ac6f6c5149051 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-pkd1.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-pkd1.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-pkd2.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-pkd2.xml new file mode 100644 index 0000000000000000000000000000000000000000..bbcf3ce061a9653020db3bc9eab84c98f7b4265c --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-pkd2.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-pkd2.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-plcg.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-plcg.xml new file mode 100644 index 0000000000000000000000000000000000000000..5b706d26115ec8ca14db62c8dba3c3a5b5a3a5d0 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-plcg.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-plcg.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-ppib.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-ppib.xml new file mode 100644 index 0000000000000000000000000000000000000000..4d2b7ea17e4a57c59eb151f4dce872e3a22a278f --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-ppib.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-ppib.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-prdm8.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-prdm8.xml new file mode 100644 index 0000000000000000000000000000000000000000..3f396bbf2218fc5f56d5748c73829fd71edaca1f --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-prdm8.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-prdm8.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-prox.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-prox.xml new file mode 100644 index 0000000000000000000000000000000000000000..68b1864e889fa24ec8047144ed489db3a350edd1 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-prox.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-prox.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-psmf1.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-psmf1.xml new file mode 100644 index 0000000000000000000000000000000000000000..f9d4b4fc0571536598acd690fdbcb508872775aa --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-psmf1.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-psmf1.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-ptf1.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-ptf1.xml new file mode 100644 index 0000000000000000000000000000000000000000..2e0710199f95da5f4f5db5e517a44c52ad257534 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-ptf1.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-ptf1.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-rab3.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-rab3.xml new file mode 100644 index 0000000000000000000000000000000000000000..96df868124026af6da5667e4a259da1a23b1583e --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-rab3.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-rab3.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-rims.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-rims.xml new file mode 100644 index 0000000000000000000000000000000000000000..2c63440126a78cd662af02d62abb4fa49f5ee5f9 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-rims.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-rims.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-robo.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-robo.xml new file mode 100644 index 0000000000000000000000000000000000000000..36bca9ba7418de7e55c65407b0ec7a789f3671e5 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-robo.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-robo.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-rpc2.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-rpc2.xml new file mode 100644 index 0000000000000000000000000000000000000000..77ce7830907d36cd2231883f5c35eed939980368 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-rpc2.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-rpc2.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/prospr-6dpf-1-whole-AChE-MED.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-rx.xml similarity index 91% rename from data/0.6.2/images/prospr-6dpf-1-whole-AChE-MED.xml rename to data/0.6.2/images/local/prospr-6dpf-1-whole-rx.xml index 92f649771c816e991b63b25999ec1284530eaaa1..68cafe335a4872e49567988e2d4fa69637cb554e 100644 --- a/data/0.6.2/images/prospr-6dpf-1-whole-AChE-MED.xml +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-rx.xml @@ -2,7 +2,7 @@ <BasePath type="relative">.</BasePath> <SequenceDescription> <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.5.4/images/prospr-6dpf-1-whole-AChE-MED.h5</hdf5> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-rx.h5</hdf5> </ImageLoader> <ViewSetups> <Attributes name="channel"> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-ryr2.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-ryr2.xml new file mode 100644 index 0000000000000000000000000000000000000000..19604288bcf73e177c5c5566876f1a813a39b0fd --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-ryr2.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-ryr2.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-scn8aa.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-scn8aa.xml new file mode 100644 index 0000000000000000000000000000000000000000..67f8bdb87ca1cd026a0d14607159d835ca464985 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-scn8aa.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-scn8aa.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-segmented-allglands.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-segmented-allglands.xml new file mode 100644 index 0000000000000000000000000000000000000000..1605c6edce87c86c51400906445a1cb63842b999 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-segmented-allglands.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-segmented-allglands.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-segmented-crypticsegment.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-segmented-crypticsegment.xml new file mode 100644 index 0000000000000000000000000000000000000000..4f6735cf2ebe09bcb3391cd76494871ccab05d87 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-segmented-crypticsegment.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-segmented-crypticsegment.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-segmented-foregut.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-segmented-foregut.xml new file mode 100644 index 0000000000000000000000000000000000000000..e005414e451672f4379f2a29a5d2cb227302597f --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-segmented-foregut.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-segmented-foregut.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-segmented-glands.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-segmented-glands.xml new file mode 100644 index 0000000000000000000000000000000000000000..f62603b55767baebe4db7966e6f1f4f8c1fb1664 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-segmented-glands.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-segmented-glands.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-segmented-head.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-segmented-head.xml new file mode 100644 index 0000000000000000000000000000000000000000..3395913f44acabcca80ca7f97e69a8697091ec67 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-segmented-head.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-segmented-head.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-segmented-lateralectoderm.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-segmented-lateralectoderm.xml new file mode 100644 index 0000000000000000000000000000000000000000..00a9b030652e7029e7ea6fbd10c810453fbc47e3 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-segmented-lateralectoderm.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-segmented-lateralectoderm.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-segmented-prospr6-ref.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-segmented-prospr6-ref.xml new file mode 100644 index 0000000000000000000000000000000000000000..19fb3b3401c7c0ccd410d9afff7021dfe167a847 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-segmented-prospr6-ref.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-segmented-prospr6-ref.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-segmented-pygidium.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-segmented-pygidium.xml new file mode 100644 index 0000000000000000000000000000000000000000..255d5aa28d9f9a96158e52202bc56707d394328f --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-segmented-pygidium.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-segmented-pygidium.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-segmented-restofanimal.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-segmented-restofanimal.xml new file mode 100644 index 0000000000000000000000000000000000000000..25c0325dccca1cb2b3056198ef37d67c63641393 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-segmented-restofanimal.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-segmented-restofanimal.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-segmented-vnc.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-segmented-vnc.xml new file mode 100644 index 0000000000000000000000000000000000000000..3a2fe9b0cebddb31f81ca003cafb1194401fd565 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-segmented-vnc.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-segmented-vnc.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-sema2.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-sema2.xml new file mode 100644 index 0000000000000000000000000000000000000000..7350c62b3914527ee8fc360de7f35fa7a7257198 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-sema2.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-sema2.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-sert.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-sert.xml new file mode 100644 index 0000000000000000000000000000000000000000..36294432bdbb9be2c2c669235abcfa62ed80a260 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-sert.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-sert.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-sim1.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-sim1.xml new file mode 100644 index 0000000000000000000000000000000000000000..bc6bce590465d7dd1548644a495cd715a0960cc2 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-sim1.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-sim1.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-six12.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-six12.xml new file mode 100644 index 0000000000000000000000000000000000000000..629f92a243aade98fcb460fd2ede6b42b71a78c0 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-six12.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-six12.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-six4.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-six4.xml new file mode 100644 index 0000000000000000000000000000000000000000..03f66778eeb247a41e3f826fa365b38f48877062 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-six4.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-six4.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-slit.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-slit.xml new file mode 100644 index 0000000000000000000000000000000000000000..fd68925caa2241426cedb5a49347f1fa34ce595d --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-slit.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-slit.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-snd1.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-snd1.xml new file mode 100644 index 0000000000000000000000000000000000000000..e6d50d571daa8f90d8b7e2f515e57a23eafc9f5c --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-snd1.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-snd1.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-sox2.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-sox2.xml new file mode 100644 index 0000000000000000000000000000000000000000..c3fd4ddfa82112143402e533cf617ae91a5a46f8 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-sox2.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-sox2.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-sox4.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-sox4.xml new file mode 100644 index 0000000000000000000000000000000000000000..ecbf9ec94b4afe2baf93a6a133e38e6f36649155 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-sox4.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-sox4.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-soxb12.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-soxb12.xml new file mode 100644 index 0000000000000000000000000000000000000000..313fcf6085ed01cb829ffa7e26061cd96214aebb --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-soxb12.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-soxb12.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-soxb2.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-soxb2.xml new file mode 100644 index 0000000000000000000000000000000000000000..1a3eea40be3e62b9a6f3169dbc864008a3f23f94 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-soxb2.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-soxb2.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-sp8.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-sp8.xml new file mode 100644 index 0000000000000000000000000000000000000000..22f47997c201eff87ac7601edc263c986cb20853 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-sp8.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-sp8.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-stathmin.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-stathmin.xml new file mode 100644 index 0000000000000000000000000000000000000000..1028e09f05c83fce1db1d00ab271a58af2b0701a --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-stathmin.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-stathmin.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-synaptopodin.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-synaptopodin.xml new file mode 100644 index 0000000000000000000000000000000000000000..f9d878b039e840314e62ddaa74dc2aae5c2e6d9c --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-synaptopodin.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-synaptopodin.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-syt.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-syt.xml new file mode 100644 index 0000000000000000000000000000000000000000..76ea43ba392dec186f0fbe9db9d719564758cd0f --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-syt.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-syt.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-syt12.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-syt12.xml new file mode 100644 index 0000000000000000000000000000000000000000..6bb5b5e8d3b09ef2896d48d36f5abd87361caad3 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-syt12.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-syt12.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-syt7.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-syt7.xml new file mode 100644 index 0000000000000000000000000000000000000000..1fe1b1130abc64f25d8a01cbf474e3c7a91f1f9a --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-syt7.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-syt7.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-syta.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-syta.xml new file mode 100644 index 0000000000000000000000000000000000000000..34687bf4f5078615bb96c89f97c10b0be676e6be --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-syta.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-syta.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-tal.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-tal.xml new file mode 100644 index 0000000000000000000000000000000000000000..b7db1ef6431d8b79ced41199bc1d41d0fc179f6b --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-tal.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-tal.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-tbh.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-tbh.xml new file mode 100644 index 0000000000000000000000000000000000000000..995a2591adf10ed1b55ce72069793a5cac288bbd --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-tbh.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-tbh.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-tbx20.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-tbx20.xml new file mode 100644 index 0000000000000000000000000000000000000000..bd7629e852279ef8f38caca961beeedd08f17e2c --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-tbx20.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-tbx20.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/prospr-6dpf-1-whole-ANPRA-MED.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-th.xml similarity index 91% rename from data/0.6.2/images/prospr-6dpf-1-whole-ANPRA-MED.xml rename to data/0.6.2/images/local/prospr-6dpf-1-whole-th.xml index b969d2e8dcaec556212d85aa2c4f56fe044441d7..e754990d67d99a7291db48fc797efe0fb54296f0 100644 --- a/data/0.6.2/images/prospr-6dpf-1-whole-ANPRA-MED.xml +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-th.xml @@ -2,7 +2,7 @@ <BasePath type="relative">.</BasePath> <SequenceDescription> <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.5.4/images/prospr-6dpf-1-whole-ANPRA-MED.h5</hdf5> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-th.h5</hdf5> </ImageLoader> <ViewSetups> <Attributes name="channel"> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-timp.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-timp.xml new file mode 100644 index 0000000000000000000000000000000000000000..d275ddf15e9a6bb2a20c31f99cf255e60c8f49ea --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-timp.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-timp.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-tlx.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-tlx.xml new file mode 100644 index 0000000000000000000000000000000000000000..9fc6c9c1d561353733720df0e7de6e8f7fc23e63 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-tlx.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-tlx.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-tmtc3.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-tmtc3.xml new file mode 100644 index 0000000000000000000000000000000000000000..a5d99af9850ec673bb4de1d00dc73540c4851a78 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-tmtc3.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-tmtc3.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-trk.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-trk.xml new file mode 100644 index 0000000000000000000000000000000000000000..d3cc00137e67dc8cb3f1cfcf71b9ef8902ec1618 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-trk.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-trk.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-trph.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-trph.xml new file mode 100644 index 0000000000000000000000000000000000000000..40effe24e72101055452d79b1a5b17868df42388 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-trph.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-trph.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-trpv.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-trpv.xml new file mode 100644 index 0000000000000000000000000000000000000000..517df0ad079a199e76d09131fa51b5e3b8450cbb --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-trpv.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-trpv.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-trpv4.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-trpv4.xml new file mode 100644 index 0000000000000000000000000000000000000000..04222f7e84a71b114602ea87dddd5128f840ab05 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-trpv4.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-trpv4.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-trpv5.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-trpv5.xml new file mode 100644 index 0000000000000000000000000000000000000000..b0bc769e14f486c1d9e2e368979d2ea0228d7556 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-trpv5.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-trpv5.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-twist.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-twist.xml new file mode 100644 index 0000000000000000000000000000000000000000..250c1da97117a0ef9f659b102d04f429bfe02c46 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-twist.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-twist.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-unc22.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-unc22.xml new file mode 100644 index 0000000000000000000000000000000000000000..ab7a23b34940657448e939c19b308588abd31252 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-unc22.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-unc22.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-uncs.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-uncs.xml new file mode 100644 index 0000000000000000000000000000000000000000..9a1ca1059366480b86a02400a0424fb5206a4767 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-uncs.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-uncs.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-uncx.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-uncx.xml new file mode 100644 index 0000000000000000000000000000000000000000..4557ebfe9991122b4fb8c2bd5d4a25a6de366689 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-uncx.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-uncx.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-upp.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-upp.xml new file mode 100644 index 0000000000000000000000000000000000000000..6bab27b4751aeccce606b2af2df28ad533886cfb --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-upp.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-upp.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-usp9x.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-usp9x.xml new file mode 100644 index 0000000000000000000000000000000000000000..7295ee493c8c6cebf8447551ee90fa2ace40fc9a --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-usp9x.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-usp9x.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-vacht.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-vacht.xml new file mode 100644 index 0000000000000000000000000000000000000000..cb9637f77e670d5b00196851d6cc78ba855d17e1 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-vacht.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-vacht.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-vat1l.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-vat1l.xml new file mode 100644 index 0000000000000000000000000000000000000000..91bbdcc31d2bd46348d82d2644655fcc06659dac --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-vat1l.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-vat1l.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-vegfr.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-vegfr.xml new file mode 100644 index 0000000000000000000000000000000000000000..ef9e95bba7e0fde9a7310b3b55cf1e1de28a13a3 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-vegfr.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-vegfr.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-vglut.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-vglut.xml new file mode 100644 index 0000000000000000000000000000000000000000..d27ba68e60ab5ba7f0706fa60cba48a6e16bf8cc --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-vglut.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-vglut.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-virtual-cells.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-virtual-cells.xml new file mode 100644 index 0000000000000000000000000000000000000000..e560684326a10471fd833a2c2ad2c50f3916cd78 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-virtual-cells.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.0/images/local/prospr-6dpf-1-whole-virtual-cells.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-wnt16.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-wnt16.xml new file mode 100644 index 0000000000000000000000000000000000000000..fe09b4bb53b377ce0c18d8d12c0db6ef96ddc6e5 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-wnt16.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-wnt16.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-wnt5.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-wnt5.xml new file mode 100644 index 0000000000000000000000000000000000000000..d53ac5dfc3a977d6f477e7a2cb8dde700ecc2aa9 --- /dev/null +++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-wnt5.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-wnt5.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.2/images/sbem-6dpf-1-whole-raw.xml b/data/0.6.2/images/local/sbem-6dpf-1-whole-raw.xml similarity index 92% rename from data/0.6.2/images/sbem-6dpf-1-whole-raw.xml rename to data/0.6.2/images/local/sbem-6dpf-1-whole-raw.xml index fcf8dfd1dc7b87baa486523931f3a653e60faf2b..5bcba368b91680b2937c422088d011e1f35f5d62 100644 --- a/data/0.6.2/images/sbem-6dpf-1-whole-raw.xml +++ b/data/0.6.2/images/local/sbem-6dpf-1-whole-raw.xml @@ -2,7 +2,7 @@ <BasePath type="relative">.</BasePath> <SequenceDescription> <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../rawdata/sbem-6dpf-1-whole-raw.h5</hdf5> + <hdf5 type="relative">../../../rawdata/sbem-6dpf-1-whole-raw.h5</hdf5> </ImageLoader> <ViewSetups> <Attributes name="channel"> diff --git a/data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-cells-labels.xml b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-cells.xml similarity index 90% rename from data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-cells-labels.xml rename to data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-cells.xml index 75dd85c44731c32dce93036963c11a8d14a65e94..2f93cae4a551059f7816e9039581ac2c6a9c8ab4 100644 --- a/data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-cells-labels.xml +++ b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-cells.xml @@ -2,7 +2,7 @@ <BasePath type="relative">.</BasePath> <SequenceDescription> <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.6.1/segmentations/sbem-6dpf-1-whole-segmented-cells-labels.h5</hdf5> + <hdf5 type="relative">../../../0.6.1/images/local/sbem-6dpf-1-whole-segmented-cells.h5</hdf5> </ImageLoader> <ViewSetups> <Attributes name="channel"> diff --git a/data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-chromatin-labels.xml b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-chromatin.xml similarity index 91% rename from data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-chromatin-labels.xml rename to data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-chromatin.xml index 25dd2b4833d7bdb07c5eef4f626e27c6f24e45df..e1e82b00cfca17456e165ecd35df72db16de3f8f 100644 --- a/data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-chromatin-labels.xml +++ b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-chromatin.xml @@ -2,7 +2,7 @@ <BasePath type="relative">.</BasePath> <SequenceDescription> <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../rawdata/sbem-6dpf-1-whole-segmented-chromatin-labels.h5</hdf5> + <hdf5 type="relative">../../../rawdata/sbem-6dpf-1-whole-segmented-chromatin.h5</hdf5> </ImageLoader> <ViewSetups> <Attributes name="channel"> diff --git a/data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-cilia-labels.xml b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-cilia.xml similarity index 92% rename from data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-cilia-labels.xml rename to data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-cilia.xml index f06bacd9e5fc9989c3ee284c0faa52c0a9e30c93..cdb51929ffe0bca1b4a62f94929a8b0482e37ed5 100644 --- a/data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-cilia-labels.xml +++ b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-cilia.xml @@ -2,7 +2,7 @@ <BasePath type="relative">.</BasePath> <SequenceDescription> <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">sbem-6dpf-1-whole-segmented-cilia-labels.h5</hdf5> + <hdf5 type="relative">sbem-6dpf-1-whole-segmented-cilia.h5</hdf5> </ImageLoader> <ViewSetups> <Attributes name="channel"> diff --git a/data/0.6.2/images/sbem-6dpf-1-whole-mask-extrapolated.xml b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-extrapolated.xml similarity index 91% rename from data/0.6.2/images/sbem-6dpf-1-whole-mask-extrapolated.xml rename to data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-extrapolated.xml index c50824989bb501b32cf446946b191d7437604aff..6eec23b1e607289d5a3e785552d45c9675159be9 100644 --- a/data/0.6.2/images/sbem-6dpf-1-whole-mask-extrapolated.xml +++ b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-extrapolated.xml @@ -2,7 +2,7 @@ <BasePath type="relative">.</BasePath> <SequenceDescription> <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../rawdata/sbem-6dpf-1-whole-mask-extrapolated.h5</hdf5> + <hdf5 type="relative">../../../rawdata/sbem-6dpf-1-whole-segmented-extrapolated.h5</hdf5> </ImageLoader> <ViewSetups> <Attributes name="channel"> diff --git a/data/0.6.2/images/sbem-6dpf-1-whole-mask-inside.xml b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-inside.xml similarity index 91% rename from data/0.6.2/images/sbem-6dpf-1-whole-mask-inside.xml rename to data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-inside.xml index 9c923a7b002613306458297233dc15317266e190..2da12641dfd126772f48aa247389a21363bb21e2 100644 --- a/data/0.6.2/images/sbem-6dpf-1-whole-mask-inside.xml +++ b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-inside.xml @@ -2,7 +2,7 @@ <BasePath type="relative">.</BasePath> <SequenceDescription> <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../rawdata/sbem-6dpf-1-whole-mask-inside.h5</hdf5> + <hdf5 type="relative">../../../rawdata/sbem-6dpf-1-whole-segmented-inside.h5</hdf5> </ImageLoader> <ViewSetups> <Attributes name="channel"> diff --git a/data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-muscle.xml b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-muscle.xml similarity index 91% rename from data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-muscle.xml rename to data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-muscle.xml index 26ba7131d4cef59b4f6a9f0c5efa11d615a5bcd0..e70beedc13fea7c6550a25e160e13073366fdcb6 100644 --- a/data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-muscle.xml +++ b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-muscle.xml @@ -2,7 +2,7 @@ <BasePath type="relative">.</BasePath> <SequenceDescription> <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../rawdata/sbem-6dpf-1-whole-segmented-muscle.h5</hdf5> + <hdf5 type="relative">../../../rawdata/sbem-6dpf-1-whole-segmented-muscle.h5</hdf5> </ImageLoader> <ViewSetups> <ViewSetup> diff --git a/data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-ariande-neuropil.xml b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-neuropil.xml similarity index 91% rename from data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-ariande-neuropil.xml rename to data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-neuropil.xml index 2b06347fc94e2b871891fa3fda99e4d3abf34410..ed6d3cf420504ad22907b2dbcaee4ff66edb4981 100644 --- a/data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-ariande-neuropil.xml +++ b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-neuropil.xml @@ -2,7 +2,7 @@ <BasePath type="relative">.</BasePath> <SequenceDescription> <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../rawdata/sbem-6dpf-1-whole-segmented-ariande-neuropil.h5</hdf5> + <hdf5 type="relative">../../../rawdata/sbem-6dpf-1-whole-segmented-neuropil.h5</hdf5> </ImageLoader> <ViewSetups> <ViewSetup> diff --git a/data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-nuclei-labels.xml b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-nuclei.xml similarity index 90% rename from data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-nuclei-labels.xml rename to data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-nuclei.xml index f818c38a08c2705fa66fc1519928f8148f4f3a56..1f61d26ddb3934bcf995543f8e60a6295e071ea2 100644 --- a/data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-nuclei-labels.xml +++ b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-nuclei.xml @@ -2,7 +2,7 @@ <BasePath type="relative">.</BasePath> <SequenceDescription> <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.0.0/segmentations/sbem-6dpf-1-whole-segmented-nuclei-labels.h5</hdf5> + <hdf5 type="relative">../../../0.0.0/images/local/sbem-6dpf-1-whole-segmented-nuclei.h5</hdf5> </ImageLoader> <ViewSetups> <Attributes name="channel"> diff --git a/data/0.6.2/images/sbem-6dpf-1-whole-mask-outside.xml b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-outside.xml similarity index 91% rename from data/0.6.2/images/sbem-6dpf-1-whole-mask-outside.xml rename to data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-outside.xml index 5f3be7ff89f00c748401a58412c96b8e3f6384f7..c0a4209d3dc531777187163e248c9e3a0f65e1ca 100644 --- a/data/0.6.2/images/sbem-6dpf-1-whole-mask-outside.xml +++ b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-outside.xml @@ -2,7 +2,7 @@ <BasePath type="relative">.</BasePath> <SequenceDescription> <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../rawdata/sbem-6dpf-1-whole-mask-outside.h5</hdf5> + <hdf5 type="relative">../../../rawdata/sbem-6dpf-1-whole-segmented-outside.h5</hdf5> </ImageLoader> <ViewSetups> <Attributes name="channel"> diff --git a/data/0.6.2/images/sbem-6dpf-1-whole-mask-resin.xml b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-resin.xml similarity index 91% rename from data/0.6.2/images/sbem-6dpf-1-whole-mask-resin.xml rename to data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-resin.xml index f71df8d26b0065debff70b264568afca4d84b34f..098e39dc6adc5c8048ebe1083c6ee1d3b2072779 100644 --- a/data/0.6.2/images/sbem-6dpf-1-whole-mask-resin.xml +++ b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-resin.xml @@ -2,7 +2,7 @@ <BasePath type="relative">.</BasePath> <SequenceDescription> <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../rawdata/sbem-6dpf-1-whole-mask-resin.h5</hdf5> + <hdf5 type="relative">../../../rawdata/sbem-6dpf-1-whole-segmented-resin.h5</hdf5> </ImageLoader> <ViewSetups> <Attributes name="channel"> diff --git a/data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-tissue-labels.xml b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-tissue.xml similarity index 91% rename from data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-tissue-labels.xml rename to data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-tissue.xml index 390dbdb4d95f90ee07f2cf3c33b9a0bfb1db27ca..767f2a63c1f53cd4e1b89ad86d94709b4b898706 100644 --- a/data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-tissue-labels.xml +++ b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-tissue.xml @@ -2,7 +2,7 @@ <BasePath type="relative">.</BasePath> <SequenceDescription> <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../rawdata/sbem-6dpf-1-whole-segmented-tissue-labels.h5</hdf5> + <hdf5 type="relative">../../../rawdata/sbem-6dpf-1-whole-segmented-tissue.h5</hdf5> </ImageLoader> <ViewSetups> <Attributes name="channel"> diff --git a/data/0.6.2/images/prospr-6dpf-1-whole-ASCb-MED.xml b/data/0.6.2/images/prospr-6dpf-1-whole-ASCb-MED.xml deleted file mode 100644 index d14d3dc36d981f9cb826b9b2aeae58d6b42ec324..0000000000000000000000000000000000000000 --- a/data/0.6.2/images/prospr-6dpf-1-whole-ASCb-MED.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.5.4/images/prospr-6dpf-1-whole-ASCb-MED.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - <ViewRegistrations> - <ViewRegistration setup="0" timepoint="0"> - <ViewTransform type="affine"> - <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> - </ViewTransform> - </ViewRegistration> - </ViewRegistrations> -</SpimData> diff --git a/data/0.6.2/images/prospr-6dpf-1-whole-AllCR1-MED.xml b/data/0.6.2/images/prospr-6dpf-1-whole-AllCR1-MED.xml deleted file mode 100644 index 9dc2d95f36d8e98186bd0b028aa0826e369b7ce9..0000000000000000000000000000000000000000 --- a/data/0.6.2/images/prospr-6dpf-1-whole-AllCR1-MED.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.5.4/images/prospr-6dpf-1-whole-AllCR1-MED.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - <ViewRegistrations> - <ViewRegistration setup="0" timepoint="0"> - <ViewTransform type="affine"> - <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> - </ViewTransform> - </ViewRegistration> - </ViewRegistrations> -</SpimData> diff --git a/data/0.6.2/images/prospr-6dpf-1-whole-AllCR2-MED.xml b/data/0.6.2/images/prospr-6dpf-1-whole-AllCR2-MED.xml deleted file mode 100644 index de9ea6bbfd03a7c35a0792d5990c05480517ec96..0000000000000000000000000000000000000000 --- a/data/0.6.2/images/prospr-6dpf-1-whole-AllCR2-MED.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.5.4/images/prospr-6dpf-1-whole-AllCR2-MED.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - <ViewRegistrations> - <ViewRegistration setup="0" timepoint="0"> - <ViewTransform type="affine"> - <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> - </ViewTransform> - </ViewRegistration> - </ViewRegistrations> -</SpimData> diff --git a/data/0.6.2/images/prospr-6dpf-1-whole-Arx-MED.xml b/data/0.6.2/images/prospr-6dpf-1-whole-Arx-MED.xml deleted file mode 100644 index 1d2c2fff95cfe3b56218ca65b228be2eeca28d6b..0000000000000000000000000000000000000000 --- a/data/0.6.2/images/prospr-6dpf-1-whole-Arx-MED.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.5.4/images/prospr-6dpf-1-whole-Arx-MED.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - <ViewRegistrations> - <ViewRegistration setup="0" timepoint="0"> - <ViewTransform type="affine"> - <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> - </ViewTransform> - </ViewRegistration> - </ViewRegistrations> -</SpimData> diff --git a/data/0.6.2/images/prospr-6dpf-1-whole-Ash-MED.xml b/data/0.6.2/images/prospr-6dpf-1-whole-Ash-MED.xml deleted file mode 100644 index 924a01ebcf0129714149d5c2ac06a7ed9d2838a3..0000000000000000000000000000000000000000 --- a/data/0.6.2/images/prospr-6dpf-1-whole-Ash-MED.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.5.4/images/prospr-6dpf-1-whole-Ash-MED.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - <ViewRegistrations> - <ViewRegistration setup="0" timepoint="0"> - <ViewTransform type="affine"> - <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> - </ViewTransform> - </ViewRegistration> - </ViewRegistrations> -</SpimData> diff --git a/data/0.6.2/images/prospr-6dpf-1-whole-BAIAP-MED.xml b/data/0.6.2/images/prospr-6dpf-1-whole-BAIAP-MED.xml deleted file mode 100644 index fe8b81d2e46d4dfb482b58cf9a89141608c1ffd5..0000000000000000000000000000000000000000 --- a/data/0.6.2/images/prospr-6dpf-1-whole-BAIAP-MED.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.5.4/images/prospr-6dpf-1-whole-BAIAP-MED.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - <ViewRegistrations> - <ViewRegistration setup="0" timepoint="0"> - <ViewTransform type="affine"> - <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> - </ViewTransform> - </ViewRegistration> - </ViewRegistrations> -</SpimData> diff --git a/data/0.6.2/images/prospr-6dpf-1-whole-BarH1-MED.xml b/data/0.6.2/images/prospr-6dpf-1-whole-BarH1-MED.xml deleted file mode 100644 index 7738f0338142854f001f969745708ea86f5a0e04..0000000000000000000000000000000000000000 --- a/data/0.6.2/images/prospr-6dpf-1-whole-BarH1-MED.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.5.4/images/prospr-6dpf-1-whole-BarH1-MED.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - <ViewRegistrations> - <ViewRegistration setup="0" timepoint="0"> - <ViewTransform type="affine"> - <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> - </ViewTransform> - </ViewRegistration> - </ViewRegistrations> -</SpimData> diff --git a/data/0.6.2/images/prospr-6dpf-1-whole-Beta3-MED.xml b/data/0.6.2/images/prospr-6dpf-1-whole-Beta3-MED.xml deleted file mode 100644 index 67ae267d7a4d097680b829c80ec2ea97fdec0106..0000000000000000000000000000000000000000 --- a/data/0.6.2/images/prospr-6dpf-1-whole-Beta3-MED.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.5.4/images/prospr-6dpf-1-whole-Beta3-MED.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - <ViewRegistrations> - <ViewRegistration setup="0" timepoint="0"> - <ViewTransform type="affine"> - <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> - </ViewTransform> - </ViewRegistration> - </ViewRegistrations> -</SpimData> diff --git a/data/0.6.2/images/prospr-6dpf-1-whole-Bmpr1-MED.xml b/data/0.6.2/images/prospr-6dpf-1-whole-Bmpr1-MED.xml deleted file mode 100644 index 72922977311c0fa11f4016ed608e2075f9c2e0dc..0000000000000000000000000000000000000000 --- a/data/0.6.2/images/prospr-6dpf-1-whole-Bmpr1-MED.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.5.4/images/prospr-6dpf-1-whole-Bmpr1-MED.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - <ViewRegistrations> - <ViewRegistration setup="0" timepoint="0"> - <ViewTransform type="affine"> - <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> - </ViewTransform> - </ViewRegistration> - </ViewRegistrations> -</SpimData> diff --git a/data/0.6.2/images/prospr-6dpf-1-whole-Brn124-MED.xml b/data/0.6.2/images/prospr-6dpf-1-whole-Brn124-MED.xml deleted file mode 100644 index b0d13357fdd3a066f9925933eeb38ec650cf35da..0000000000000000000000000000000000000000 --- a/data/0.6.2/images/prospr-6dpf-1-whole-Brn124-MED.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.5.4/images/prospr-6dpf-1-whole-Brn124-MED.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - <ViewRegistrations> - <ViewRegistration setup="0" timepoint="0"> - <ViewTransform type="affine"> - <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> - </ViewTransform> - </ViewRegistration> - 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a/data/0.6.2/images/prospr-6dpf-1-whole-Hb9-MED.xml b/data/0.6.2/images/prospr-6dpf-1-whole-Hb9-MED.xml deleted file mode 100644 index df20c6d5ba043a5dd4ad2619543c654c5179aaa1..0000000000000000000000000000000000000000 --- a/data/0.6.2/images/prospr-6dpf-1-whole-Hb9-MED.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.5.4/images/prospr-6dpf-1-whole-Hb9-MED.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - 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b/data/0.6.2/images/prospr-6dpf-1-whole-NOV2-NOV2-MED.xml deleted file mode 100644 index ee6cdd9582c5501e46899db28121a405c3da6b19..0000000000000000000000000000000000000000 --- a/data/0.6.2/images/prospr-6dpf-1-whole-NOV2-NOV2-MED.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.5.4/images/prospr-6dpf-1-whole-NOV2-NOV2-MED.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - <ViewRegistrations> - 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a/data/0.6.2/images/prospr-6dpf-1-whole-Scn8aa-MED.xml b/data/0.6.2/images/prospr-6dpf-1-whole-Scn8aa-MED.xml deleted file mode 100644 index 3b7712e5b868f9964b60060d94d8952f448d8e49..0000000000000000000000000000000000000000 --- a/data/0.6.2/images/prospr-6dpf-1-whole-Scn8aa-MED.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.5.4/images/prospr-6dpf-1-whole-Scn8aa-MED.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - 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1023f20ee78a39c1d54f78b47a327f4a04d5afcb..0000000000000000000000000000000000000000 --- a/data/0.6.2/images/prospr-6dpf-1-whole-msx-MED.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.5.4/images/prospr-6dpf-1-whole-msx-MED.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - <ViewRegistrations> - <ViewRegistration setup="0" timepoint="0"> - <ViewTransform type="affine"> - <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 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a/data/0.6.2/images/prospr-6dpf-1-whole-nompc3-MED.xml b/data/0.6.2/images/prospr-6dpf-1-whole-nompc3-MED.xml deleted file mode 100644 index 2c676145c05f96f3a1dac5f5c7021ef34b9db8c4..0000000000000000000000000000000000000000 --- a/data/0.6.2/images/prospr-6dpf-1-whole-nompc3-MED.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.5.4/images/prospr-6dpf-1-whole-nompc3-MED.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - 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b/data/0.6.2/images/prospr-6dpf-1-whole-segmented-AllGlands.xml deleted file mode 100644 index f4d392de61941e552ef1f4104b3aa0b0dd80ba84..0000000000000000000000000000000000000000 --- a/data/0.6.2/images/prospr-6dpf-1-whole-segmented-AllGlands.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.5.4/images/prospr-6dpf-1-whole-segmented-AllGlands.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - <ViewRegistrations> 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2b6305178eab6ebb34ed8b600bfde112264295ec..0000000000000000000000000000000000000000 --- a/data/0.6.2/images/prospr-6dpf-1-whole-segmented-Head.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.5.4/images/prospr-6dpf-1-whole-segmented-Head.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - <ViewRegistrations> - <ViewRegistration setup="0" timepoint="0"> - <ViewTransform type="affine"> - <affine>0.55 0.0 0.0 0.0 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a/data/0.6.2/images/prospr-6dpf-1-whole-sert-MED.xml b/data/0.6.2/images/prospr-6dpf-1-whole-sert-MED.xml deleted file mode 100644 index 5702f9fca5b5de30fa12c577f33ee361b16c5784..0000000000000000000000000000000000000000 --- a/data/0.6.2/images/prospr-6dpf-1-whole-sert-MED.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.5.4/images/prospr-6dpf-1-whole-sert-MED.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - 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type="relative">../../0.5.4/images/prospr-6dpf-1-whole-six4-MED.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - <ViewRegistrations> - <ViewRegistration setup="0" timepoint="0"> - <ViewTransform type="affine"> - <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> - </ViewTransform> - </ViewRegistration> - </ViewRegistrations> -</SpimData> diff --git a/data/0.6.2/images/prospr-6dpf-1-whole-tlx-MED.xml b/data/0.6.2/images/prospr-6dpf-1-whole-tlx-MED.xml deleted file mode 100644 index eac7a1f277d2205db1237a5e61d3f23faefc1db6..0000000000000000000000000000000000000000 --- a/data/0.6.2/images/prospr-6dpf-1-whole-tlx-MED.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.5.4/images/prospr-6dpf-1-whole-tlx-MED.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - <ViewRegistrations> - <ViewRegistration setup="0" timepoint="0"> - <ViewTransform type="affine"> - <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> - </ViewTransform> - </ViewRegistration> - </ViewRegistrations> -</SpimData> diff --git a/data/0.6.2/images/prospr-6dpf-1-whole-trk-MED.xml b/data/0.6.2/images/prospr-6dpf-1-whole-trk-MED.xml deleted file mode 100644 index 89b6b4493545551ac7d6b8459f2b5e11bb4ae833..0000000000000000000000000000000000000000 --- a/data/0.6.2/images/prospr-6dpf-1-whole-trk-MED.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.5.4/images/prospr-6dpf-1-whole-trk-MED.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - <ViewRegistrations> - <ViewRegistration setup="0" timepoint="0"> - <ViewTransform type="affine"> - <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> - </ViewTransform> - </ViewRegistration> - </ViewRegistrations> -</SpimData> diff --git a/data/0.6.2/images/prospr-6dpf-1-whole-uncx-MED.xml b/data/0.6.2/images/prospr-6dpf-1-whole-uncx-MED.xml deleted file mode 100644 index cbc2161bd920ac020f534a0cc95a3274a5aca9cb..0000000000000000000000000000000000000000 --- a/data/0.6.2/images/prospr-6dpf-1-whole-uncx-MED.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.5.4/images/prospr-6dpf-1-whole-uncx-MED.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - <ViewRegistrations> - <ViewRegistration setup="0" timepoint="0"> - <ViewTransform type="affine"> - <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> - </ViewTransform> - </ViewRegistration> - </ViewRegistrations> -</SpimData> diff --git a/data/0.6.2/misc/bdv_server.txt b/data/0.6.2/misc/bdv_server.txt deleted file mode 100644 index bdf30471e64375f0f0d57ace19f020dea3d46fab..0000000000000000000000000000000000000000 --- a/data/0.6.2/misc/bdv_server.txt +++ /dev/null @@ -1,229 +0,0 @@ -sbem-6dpf-1-whole-raw ../images/sbem-6dpf-1-whole-raw.xml -sbem-6dpf-1-whole-mask-resin ../images/sbem-6dpf-1-whole-mask-resin.xml -sbem-6dpf-1-whole-mask-inside ../images/sbem-6dpf-1-whole-mask-inside.xml -sbem-6dpf-1-whole-mask-outside ../images/sbem-6dpf-1-whole-mask-outside.xml -prospr-6dpf-1-whole-ENR69-BCA1-MED ../images/prospr-6dpf-1-whole-ENR69-BCA1-MED.xml -prospr-6dpf-1-whole-AllCR2-MED ../images/prospr-6dpf-1-whole-AllCR2-MED.xml -prospr-6dpf-1-whole-ANPRB-MED ../images/prospr-6dpf-1-whole-ANPRB-MED.xml -prospr-6dpf-1-whole-Calmodulin-MED ../images/prospr-6dpf-1-whole-Calmodulin-MED.xml -prospr-6dpf-1-whole-ENR22-CO1A1-MED ../images/prospr-6dpf-1-whole-ENR22-CO1A1-MED.xml -prospr-6dpf-1-whole-ENR39-RPC2-MED ../images/prospr-6dpf-1-whole-ENR39-RPC2-MED.xml -prospr-6dpf-1-whole-ChAT-MED ../images/prospr-6dpf-1-whole-ChAT-MED.xml -prospr-6dpf-1-whole-Arx-MED ../images/prospr-6dpf-1-whole-Arx-MED.xml -prospr-6dpf-1-whole-Brn124-MED ../images/prospr-6dpf-1-whole-Brn124-MED.xml -prospr-6dpf-1-whole-ANPRA-MED ../images/prospr-6dpf-1-whole-ANPRA-MED.xml 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../images/prospr-6dpf-1-whole-Tbx20-MED.xml -prospr-6dpf-1-whole-TRPV4-MED ../images/prospr-6dpf-1-whole-TRPV4-MED.xml -prospr-6dpf-1-whole-TH-MED ../images/prospr-6dpf-1-whole-TH-MED.xml -prospr-6dpf-1-whole-Syt12-MED ../images/prospr-6dpf-1-whole-Syt12-MED.xml -prospr-6dpf-1-whole-Tbh-MED ../images/prospr-6dpf-1-whole-Tbh-MED.xml -prospr-6dpf-1-whole-TIMP-MED ../images/prospr-6dpf-1-whole-TIMP-MED.xml -prospr-6dpf-1-whole-VAChT-MED ../images/prospr-6dpf-1-whole-VAChT-MED.xml -prospr-6dpf-1-whole-TRPV5-MED ../images/prospr-6dpf-1-whole-TRPV5-MED.xml -prospr-6dpf-1-whole-Wnt16-MED ../images/prospr-6dpf-1-whole-Wnt16-MED.xml -prospr-6dpf-1-whole-bsx-MED ../images/prospr-6dpf-1-whole-bsx-MED.xml -prospr-6dpf-1-whole-Tal-MED ../images/prospr-6dpf-1-whole-Tal-MED.xml -prospr-6dpf-1-whole-UNCS-MED ../images/prospr-6dpf-1-whole-UNCS-MED.xml -prospr-6dpf-1-whole-ascII-MED ../images/prospr-6dpf-1-whole-ascII-MED.xml -prospr-6dpf-1-whole-Wnt5-MED ../images/prospr-6dpf-1-whole-Wnt5-MED.xml 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../images/prospr-6dpf-1-whole-lbx1b-MED.xml -prospr-6dpf-1-whole-catL-MED ../images/prospr-6dpf-1-whole-catL-MED.xml -prospr-6dpf-1-whole-nk22-MED ../images/prospr-6dpf-1-whole-nk22-MED.xml -prospr-6dpf-1-whole-nAchR-MED ../images/prospr-6dpf-1-whole-nAchR-MED.xml -prospr-6dpf-1-whole-irx2546-MED ../images/prospr-6dpf-1-whole-irx2546-MED.xml -prospr-6dpf-1-whole-ato2-MED ../images/prospr-6dpf-1-whole-ato2-MED.xml -prospr-6dpf-1-whole-lhx6-MED ../images/prospr-6dpf-1-whole-lhx6-MED.xml -prospr-6dpf-1-whole-fezf-MED ../images/prospr-6dpf-1-whole-fezf-MED.xml -prospr-6dpf-1-whole-hox1-MED ../images/prospr-6dpf-1-whole-hox1-MED.xml -prospr-6dpf-1-whole-gsx-MED ../images/prospr-6dpf-1-whole-gsx-MED.xml -prospr-6dpf-1-whole-irx6-MED ../images/prospr-6dpf-1-whole-irx6-MED.xml -prospr-6dpf-1-whole-ngn-MED ../images/prospr-6dpf-1-whole-ngn-MED.xml -prospr-6dpf-1-whole-tlx-MED ../images/prospr-6dpf-1-whole-tlx-MED.xml -prospr-6dpf-1-whole-nk21-MED ../images/prospr-6dpf-1-whole-nk21-MED.xml 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-prospr-6dpf-1-whole-pkd2-MED ../images/prospr-6dpf-1-whole-pkd2-MED.xml -prospr-6dpf-1-whole-segmented-Head ../images/prospr-6dpf-1-whole-segmented-Head.xml -prospr-6dpf-1-whole-segmented-CrypticSegment ../images/prospr-6dpf-1-whole-segmented-CrypticSegment.xml -prospr-6dpf-1-whole-pkd1-MED ../images/prospr-6dpf-1-whole-pkd1-MED.xml -prospr-6dpf-1-whole-ntrps-MED ../images/prospr-6dpf-1-whole-ntrps-MED.xml -prospr-6dpf-1-whole-uncx-MED ../images/prospr-6dpf-1-whole-uncx-MED.xml -prospr-6dpf-1-whole-six12-MED ../images/prospr-6dpf-1-whole-six12-MED.xml -prospr-6dpf-1-whole-segmented-Pygidium ../images/prospr-6dpf-1-whole-segmented-Pygidium.xml -prospr-6dpf-1-whole-six4-MED ../images/prospr-6dpf-1-whole-six4-MED.xml -prospr-6dpf-1-whole-segmented-PNS ../images/prospr-6dpf-1-whole-segmented-PNS.xml -prospr-6dpf-1-whole-segmented-RestOfAnimal ../images/prospr-6dpf-1-whole-segmented-RestOfAnimal.xml -prospr-6dpf-1-whole-segmented-Stomodeum ../images/prospr-6dpf-1-whole-segmented-Stomodeum.xml -prospr-6dpf-1-whole-segmented-VNC ../images/prospr-6dpf-1-whole-segmented-VNC.xml -prospr-6dpf-1-whole-segmented-ProSPr6-Ref ../images/prospr-6dpf-1-whole-segmented-ProSPr6-Ref.xml -sbem-6dpf-1-whole-mask-extrapolated ../images/sbem-6dpf-1-whole-mask-extrapolated.xml -sbem-6dpf-1-whole-segmented-chromatin-labels ../segmentations/sbem-6dpf-1-whole-segmented-chromatin-labels.xml -sbem-6dpf-1-whole-segmented-tissue-labels ../segmentations/sbem-6dpf-1-whole-segmented-tissue-labels.xml -sbem-6dpf-1-whole-segmented-muscle ../segmentations/sbem-6dpf-1-whole-segmented-muscle.xml -sbem-6dpf-1-whole-segmented-cells-labels ../segmentations/sbem-6dpf-1-whole-segmented-cells-labels.xml -sbem-6dpf-1-whole-segmented-nuclei-labels ../segmentations/sbem-6dpf-1-whole-segmented-nuclei-labels.xml -sbem-6dpf-1-whole-segmented-cilia-labels ../segmentations/sbem-6dpf-1-whole-segmented-cilia-labels.xml -sbem-6dpf-1-whole-segmented-ariande-neuropil ../segmentations/sbem-6dpf-1-whole-segmented-ariande-neuropil.xml -sbem-6dpf-1-whole-segmented-cats-neuropil ../segmentations/sbem-6dpf-1-whole-segmented-cats-neuropil.xml -prospr-6dpf-1-whole-virtual-cells-labels ../segmentations/prospr-6dpf-1-whole-virtual-cells-labels.xml diff --git a/data/0.6.2/misc/dynamic_segmentations.json b/data/0.6.2/misc/dynamic_segmentations.json new file mode 100644 index 0000000000000000000000000000000000000000..bea02b55843f5a7558391c57b167620e63328359 --- /dev/null +++ b/data/0.6.2/misc/dynamic_segmentations.json @@ -0,0 +1,29 @@ +{ + "sbem-6dpf-1-whole-segmented-cells": { + "PainteraProject:": [ + "/g/kreshuk/data/arendt/platyneris_v1/data.n5", + "volumes/paintera/proofread_cells" + ], + "Postprocess": { + "BoundaryKey": "volumes/affinities/s1", + "BoundaryPath": "/g/kreshuk/data/arendt/platyneris_v1/data.n5", + "LabelSegmentation": false, + "MaxSegmentNumber": 32700 + }, + "TableUpdateFunction": "make_cell_tables" + }, + "sbem-6dpf-1-whole-segmented-cilia": { + "PainteraProject:": [ + "/g/kreshuk/data/arendt/platyneris_v1/data.n5", + "volumes/paintera/proofread_cilia" + ], + "TableUpdateFunction": "make_cilia_tables" + }, + "sbem-6dpf-1-whole-segmented-nuclei": { + "PainteraProject:": [ + "/g/kreshuk/data/arendt/platyneris_v1/data.n5", + "volumes/paintera/nuclei" + ], + "TableUpdateFunction": "make_nuclei_tables" + } +} \ No newline at end of file diff --git a/data/0.6.2/segmentations/prospr-6dpf-1-whole-virtual-cells-labels.xml b/data/0.6.2/segmentations/prospr-6dpf-1-whole-virtual-cells-labels.xml deleted file mode 100644 index 07b8e7c9e12bf3b74bcaf3580d3b52f9fde69884..0000000000000000000000000000000000000000 --- a/data/0.6.2/segmentations/prospr-6dpf-1-whole-virtual-cells-labels.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.6.0/segmentations/prospr-6dpf-1-whole-virtual-cells-labels.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - <ViewRegistrations> - <ViewRegistration setup="0" timepoint="0"> - <ViewTransform type="affine"> - <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> - </ViewTransform> - </ViewRegistration> - </ViewRegistrations> -</SpimData> diff --git a/data/0.6.2/tables/prospr-6dpf-1-whole-virtual-cells-labels/default.csv b/data/0.6.2/tables/prospr-6dpf-1-whole-virtual-cells-labels/default.csv deleted file mode 120000 index 0ce8e1035c53edc1784ede535c666d0ac03fb2cf..0000000000000000000000000000000000000000 --- a/data/0.6.2/tables/prospr-6dpf-1-whole-virtual-cells-labels/default.csv +++ /dev/null @@ -1 +0,0 @@ -../../../0.6.1/tables/prospr-6dpf-1-whole-virtual-cells-labels/default.csv \ No newline at end of file diff --git a/data/0.6.2/tables/prospr-6dpf-1-whole-virtual-cells-labels/profile_clust_curated.csv b/data/0.6.2/tables/prospr-6dpf-1-whole-virtual-cells-labels/profile_clust_curated.csv deleted file mode 120000 index 838deacccaabe9bf89cbede6ecc09549f7f5a490..0000000000000000000000000000000000000000 --- a/data/0.6.2/tables/prospr-6dpf-1-whole-virtual-cells-labels/profile_clust_curated.csv +++ /dev/null @@ -1 +0,0 @@ -../../../0.6.1/tables/prospr-6dpf-1-whole-virtual-cells-labels/profile_clust_curated.csv \ No newline at end of file diff --git a/data/0.6.2/tables/prospr-6dpf-1-whole-virtual-cells-labels/additional_tables.txt b/data/0.6.2/tables/prospr-6dpf-1-whole-virtual-cells/additional_tables.txt similarity index 100% rename from data/0.6.2/tables/prospr-6dpf-1-whole-virtual-cells-labels/additional_tables.txt rename to data/0.6.2/tables/prospr-6dpf-1-whole-virtual-cells/additional_tables.txt diff --git a/data/0.6.2/tables/prospr-6dpf-1-whole-virtual-cells/default.csv b/data/0.6.2/tables/prospr-6dpf-1-whole-virtual-cells/default.csv new file mode 120000 index 0000000000000000000000000000000000000000..f29780c44d75900c690c33b93db0b045b54b5405 --- /dev/null +++ b/data/0.6.2/tables/prospr-6dpf-1-whole-virtual-cells/default.csv @@ -0,0 +1 @@ +../../../0.6.1/tables/prospr-6dpf-1-whole-virtual-cells/default.csv \ No newline at end of file diff --git a/data/0.6.2/tables/prospr-6dpf-1-whole-virtual-cells/profile_clust_curated.csv b/data/0.6.2/tables/prospr-6dpf-1-whole-virtual-cells/profile_clust_curated.csv new file mode 120000 index 0000000000000000000000000000000000000000..47f6e7169118c1d71ee805a44942a09c6bfd4661 --- /dev/null +++ b/data/0.6.2/tables/prospr-6dpf-1-whole-virtual-cells/profile_clust_curated.csv @@ -0,0 +1 @@ +../../../0.6.1/tables/prospr-6dpf-1-whole-virtual-cells/profile_clust_curated.csv \ No newline at end of file diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/cells_to_nuclei.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/cells_to_nuclei.csv deleted file mode 120000 index e4d242f063f7c6be1dbad1c9f4ae55d8a1897932..0000000000000000000000000000000000000000 --- a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/cells_to_nuclei.csv +++ /dev/null @@ -1 +0,0 @@ -../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-cells-labels/cells_to_nuclei.csv \ No newline at end of file diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/default.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/default.csv deleted file mode 120000 index 003c71dff6f8129ca4952ce2dccfee90b82e64a5..0000000000000000000000000000000000000000 --- a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/default.csv +++ /dev/null @@ -1 +0,0 @@ -../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-cells-labels/default.csv \ No newline at end of file diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/extrapolated_intensity_correction.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/extrapolated_intensity_correction.csv deleted file mode 120000 index 17fa743d2f0ce4cb3df5accb0f69f144fdd7fdd5..0000000000000000000000000000000000000000 --- a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/extrapolated_intensity_correction.csv +++ /dev/null @@ -1 +0,0 @@ -../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-cells-labels/extrapolated_intensity_correction.csv \ No newline at end of file diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/genes.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/genes.csv deleted file mode 120000 index bce3cfbf478b18b57c32e5c157f6a9496627a17d..0000000000000000000000000000000000000000 --- a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/genes.csv +++ /dev/null @@ -1 +0,0 @@ -../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-cells-labels/genes.csv \ No newline at end of file diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/morphology.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/morphology.csv deleted file mode 120000 index f7c6cc38faf2cd7325c6814188ff8135be539004..0000000000000000000000000000000000000000 --- a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/morphology.csv +++ /dev/null @@ -1 +0,0 @@ -../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-cells-labels/morphology.csv \ No newline at end of file diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/regions.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/regions.csv deleted file mode 120000 index dcc9316fb18f439cbbfbe02854be6f00c6ee826c..0000000000000000000000000000000000000000 --- a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/regions.csv +++ /dev/null @@ -1 +0,0 @@ -../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-cells-labels/regions.csv \ No newline at end of file diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/vc_assignments.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/vc_assignments.csv deleted file mode 120000 index 1bd3de772735959dc11389b879fa4278e02d900a..0000000000000000000000000000000000000000 --- a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/vc_assignments.csv +++ /dev/null @@ -1 +0,0 @@ -../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-cells-labels/vc_assignments.csv \ No newline at end of file diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/additional_tables.txt b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/additional_tables.txt similarity index 100% rename from data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/additional_tables.txt rename to data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/additional_tables.txt diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/cells_to_nuclei.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/cells_to_nuclei.csv new file mode 120000 index 0000000000000000000000000000000000000000..7ad93e438e220135e095f339620c979818b435aa --- /dev/null +++ b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/cells_to_nuclei.csv @@ -0,0 +1 @@ +../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-cells/cells_to_nuclei.csv \ No newline at end of file diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/default.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/default.csv new file mode 120000 index 0000000000000000000000000000000000000000..c835c1a09999f90050dd3d51ccacbf12f8c921e8 --- /dev/null +++ b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/default.csv @@ -0,0 +1 @@ +../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-cells/default.csv \ No newline at end of file diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/extrapolated_intensity_correction.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/extrapolated_intensity_correction.csv new file mode 120000 index 0000000000000000000000000000000000000000..853949a386fe53db4ed77a91ae81ad700769c1b8 --- /dev/null +++ b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/extrapolated_intensity_correction.csv @@ -0,0 +1 @@ +../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-cells/extrapolated_intensity_correction.csv \ No newline at end of file diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/genes.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/genes.csv new file mode 120000 index 0000000000000000000000000000000000000000..08412626792f6efd23a08027b5cdeffe51be0a51 --- /dev/null +++ b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/genes.csv @@ -0,0 +1 @@ +../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-cells/genes.csv \ No newline at end of file diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/morphology.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/morphology.csv new file mode 120000 index 0000000000000000000000000000000000000000..da4da1e8f9c2ec6c4905a9337051d1a0fc6ab35f --- /dev/null +++ b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/morphology.csv @@ -0,0 +1 @@ +../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-cells/morphology.csv \ No newline at end of file diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/regions.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/regions.csv new file mode 120000 index 0000000000000000000000000000000000000000..7dac8cdfa02b32f70afaece8f3af31b4d738f850 --- /dev/null +++ b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/regions.csv @@ -0,0 +1 @@ +../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-cells/regions.csv \ No newline at end of file diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/vc_assignments.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/vc_assignments.csv new file mode 120000 index 0000000000000000000000000000000000000000..143149a0dec9727c283cb97f24531fc53cbb922b --- /dev/null +++ b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/vc_assignments.csv @@ -0,0 +1 @@ +../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-cells/vc_assignments.csv \ No newline at end of file diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-chromatin-labels/default.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-chromatin-labels/default.csv deleted file mode 120000 index ca2cf1d4edcfa91efd5df176e9f94e10f3841bf4..0000000000000000000000000000000000000000 --- a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-chromatin-labels/default.csv +++ /dev/null @@ -1 +0,0 @@ -../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-chromatin-labels/default.csv \ No newline at end of file diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-chromatin/default.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-chromatin/default.csv new file mode 120000 index 0000000000000000000000000000000000000000..25b50f792e6ba7d1abaa76c4344fa3b04c476465 --- /dev/null +++ b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-chromatin/default.csv @@ -0,0 +1 @@ +../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-chromatin/default.csv \ No newline at end of file diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cilia-labels/additional_tables.txt b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cilia/additional_tables.txt similarity index 100% rename from data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cilia-labels/additional_tables.txt rename to data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cilia/additional_tables.txt diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cilia-labels/cell_mapping.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cilia/cell_mapping.csv similarity index 100% rename from data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cilia-labels/cell_mapping.csv rename to data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cilia/cell_mapping.csv diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cilia-labels/default.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cilia/default.csv similarity index 100% rename from data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cilia-labels/default.csv rename to data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cilia/default.csv diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cilia-labels/morphology.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cilia/morphology.csv similarity index 100% rename from data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cilia-labels/morphology.csv rename to data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cilia/morphology.csv diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/default.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/default.csv deleted file mode 120000 index dfb7b53d03f192030d6781bb315a35a497eab66a..0000000000000000000000000000000000000000 --- a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/default.csv +++ /dev/null @@ -1 +0,0 @@ -../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/default.csv \ No newline at end of file diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/extrapolated_intensity_correction.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/extrapolated_intensity_correction.csv deleted file mode 120000 index 23c8c2916181fe83b2b0680271b1635932d43c25..0000000000000000000000000000000000000000 --- a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/extrapolated_intensity_correction.csv +++ /dev/null @@ -1 +0,0 @@ -../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/extrapolated_intensity_correction.csv \ No newline at end of file diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/morphology.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/morphology.csv deleted file mode 120000 index 5fea80832ea07829d95d32def97376e4592011fa..0000000000000000000000000000000000000000 --- a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/morphology.csv +++ /dev/null @@ -1 +0,0 @@ -../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/morphology.csv \ No newline at end of file diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/additional_tables.txt b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei/additional_tables.txt similarity index 100% rename from data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/additional_tables.txt rename to data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei/additional_tables.txt diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei/default.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei/default.csv new file mode 120000 index 0000000000000000000000000000000000000000..7ac67c2c8a6683b33b652d67f949306e25343037 --- /dev/null +++ b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei/default.csv @@ -0,0 +1 @@ +../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-nuclei/default.csv \ No newline at end of file diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei/extrapolated_intensity_correction.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei/extrapolated_intensity_correction.csv new file mode 120000 index 0000000000000000000000000000000000000000..b854c737dd66bee423c921ce16dfb95d9ca88741 --- /dev/null +++ b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei/extrapolated_intensity_correction.csv @@ -0,0 +1 @@ +../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-nuclei/extrapolated_intensity_correction.csv \ No newline at end of file diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei/morphology.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei/morphology.csv new file mode 120000 index 0000000000000000000000000000000000000000..c871c1c7cae34e137036bf5d9a4ff91f01c9d28b --- /dev/null +++ b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei/morphology.csv @@ -0,0 +1 @@ +../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-nuclei/morphology.csv \ No newline at end of file diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-tissue-labels/default.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-tissue-labels/default.csv deleted file mode 120000 index 5320a2baa1a4a55d9461ee6a75206e39cbb7e1e7..0000000000000000000000000000000000000000 --- a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-tissue-labels/default.csv +++ /dev/null @@ -1 +0,0 @@ -../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-tissue-labels/default.csv \ No newline at end of file diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-tissue/default.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-tissue/default.csv new file mode 120000 index 0000000000000000000000000000000000000000..3b7b97174d23eb45fcf4275cd91101a611609ec4 --- /dev/null +++ b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-tissue/default.csv @@ -0,0 +1 @@ +../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-tissue/default.csv \ No newline at end of file