From 70487c1873368f3eea21316a5a1dcf77a71dd117 Mon Sep 17 00:00:00 2001
From: Constantin Pape <constantin.pape@iwr.uni-heidelberg.de>
Date: Thu, 6 Feb 2020 19:40:31 +0100
Subject: [PATCH] Migrate 0.6.2
---
data/0.6.2/images/images.json | 1820 +++++++++++++++++
.../images/local/prospr-6dpf-1-whole-ache.xml | 39 +
.../local/prospr-6dpf-1-whole-allcr1.xml | 39 +
.../local/prospr-6dpf-1-whole-allcr2.xml | 39 +
.../local/prospr-6dpf-1-whole-anpra.xml | 39 +
.../local/prospr-6dpf-1-whole-anprb.xml | 39 +
.../prospr-6dpf-1-whole-ap2.xml} | 2 +-
.../prospr-6dpf-1-whole-arx.xml} | 2 +-
.../images/local/prospr-6dpf-1-whole-ascb.xml | 39 +
.../images/local/prospr-6dpf-1-whole-asci.xml | 39 +
.../local/prospr-6dpf-1-whole-ascii.xml | 39 +
.../images/local/prospr-6dpf-1-whole-ash.xml | 39 +
.../local/prospr-6dpf-1-whole-asicalpha.xml | 39 +
.../images/local/prospr-6dpf-1-whole-ato2.xml | 39 +
.../local/prospr-6dpf-1-whole-baiap.xml | 39 +
.../local/prospr-6dpf-1-whole-barh1.xml | 39 +
.../images/local/prospr-6dpf-1-whole-bca1.xml | 39 +
.../local/prospr-6dpf-1-whole-beta3.xml | 39 +
.../local/prospr-6dpf-1-whole-bmpr1.xml | 39 +
.../local/prospr-6dpf-1-whole-boule-like.xml | 39 +
.../local/prospr-6dpf-1-whole-brn124.xml | 39 +
.../local/prospr-6dpf-1-whole-brn3a.xml | 39 +
.../images/local/prospr-6dpf-1-whole-bsx.xml | 39 +
.../images/local/prospr-6dpf-1-whole-cal2.xml | 39 +
.../local/prospr-6dpf-1-whole-calexcitin2.xml | 39 +
.../local/prospr-6dpf-1-whole-calmodulin.xml | 39 +
.../images/local/prospr-6dpf-1-whole-catl.xml | 39 +
.../images/local/prospr-6dpf-1-whole-ccvd.xml | 39 +
.../local/prospr-6dpf-1-whole-cepu1.xml | 39 +
.../images/local/prospr-6dpf-1-whole-chat.xml | 39 +
.../local/prospr-6dpf-1-whole-chx10.xml | 39 +
.../images/local/prospr-6dpf-1-whole-cnga.xml | 39 +
.../local/prospr-6dpf-1-whole-co1a1.xml | 39 +
.../images/local/prospr-6dpf-1-whole-coe.xml | 39 +
.../images/local/prospr-6dpf-1-whole-dach.xml | 39 +
.../local/prospr-6dpf-1-whole-dbhlike.xml | 39 +
.../images/local/prospr-6dpf-1-whole-dbx1.xml | 39 +
.../local/prospr-6dpf-1-whole-delta.xml | 39 +
.../images/local/prospr-6dpf-1-whole-dlx.xml | 39 +
.../local/prospr-6dpf-1-whole-dopard2.xml | 39 +
.../prospr-6dpf-1-whole-edu3to4at6dpf.xml | 39 +
.../local/prospr-6dpf-1-whole-edu42to48.xml | 39 +
.../prospr-6dpf-1-whole-edu4to5at6dpf.xml | 39 +
.../prospr-6dpf-1-whole-edu5to6at6dpf.xml | 39 +
.../images/local/prospr-6dpf-1-whole-elav.xml | 39 +
.../images/local/prospr-6dpf-1-whole-eve.xml | 39 +
.../images/local/prospr-6dpf-1-whole-eya.xml | 39 +
.../images/local/prospr-6dpf-1-whole-fezf.xml | 39 +
.../images/local/prospr-6dpf-1-whole-for.xml | 39 +
.../local/prospr-6dpf-1-whole-foxd3.xml | 39 +
.../local/prospr-6dpf-1-whole-foxn4.xml | 39 +
.../images/local/prospr-6dpf-1-whole-fvri.xml | 39 +
.../local/prospr-6dpf-1-whole-fxl21.xml | 39 +
.../images/local/prospr-6dpf-1-whole-gad.xml | 39 +
.../local/prospr-6dpf-1-whole-gata123.xml | 39 +
.../images/local/prospr-6dpf-1-whole-gcb.xml | 39 +
.../images/local/prospr-6dpf-1-whole-gcd.xml | 39 +
.../local/prospr-6dpf-1-whole-gdpd1.xml | 39 +
.../local/prospr-6dpf-1-whole-globin-like.xml | 39 +
.../images/local/prospr-6dpf-1-whole-glt1.xml | 39 +
.../images/local/prospr-6dpf-1-whole-glyt.xml | 39 +
.../images/local/prospr-6dpf-1-whole-gnrh.xml | 39 +
.../local/prospr-6dpf-1-whole-gnrhr.xml | 39 +
.../images/local/prospr-6dpf-1-whole-gpb.xml | 39 +
.../local/prospr-6dpf-1-whole-gpcr2.xml | 39 +
.../local/prospr-6dpf-1-whole-gpcr203.xml | 39 +
.../local/prospr-6dpf-1-whole-gpcr209.xml | 39 +
.../local/prospr-6dpf-1-whole-gpcr210.xml | 39 +
.../local/prospr-6dpf-1-whole-gpcr32.xml | 39 +
.../local/prospr-6dpf-1-whole-gppcr21.xml | 39 +
.../local/prospr-6dpf-1-whole-grik3.xml | 39 +
.../images/local/prospr-6dpf-1-whole-grm7.xml | 39 +
.../images/local/prospr-6dpf-1-whole-gsx.xml | 39 +
.../images/local/prospr-6dpf-1-whole-gucy.xml | 39 +
.../images/local/prospr-6dpf-1-whole-hand.xml | 39 +
.../images/local/prospr-6dpf-1-whole-hb9.xml | 39 +
.../images/local/prospr-6dpf-1-whole-hcn1.xml | 39 +
.../images/local/prospr-6dpf-1-whole-hnf6.xml | 39 +
.../images/local/prospr-6dpf-1-whole-hox1.xml | 39 +
.../images/local/prospr-6dpf-1-whole-hox4.xml | 39 +
.../images/local/prospr-6dpf-1-whole-hox7.xml | 39 +
.../images/local/prospr-6dpf-1-whole-hr38.xml | 39 +
.../local/prospr-6dpf-1-whole-irx2546.xml | 39 +
.../images/local/prospr-6dpf-1-whole-irx6.xml | 39 +
.../images/local/prospr-6dpf-1-whole-isl.xml | 39 +
.../local/prospr-6dpf-1-whole-jkip3.xml | 39 +
.../prospr-6dpf-1-whole-junctophilin1.xml | 39 +
.../local/prospr-6dpf-1-whole-kanl3.xml | 39 +
.../local/prospr-6dpf-1-whole-kv33b.xml | 39 +
.../local/prospr-6dpf-1-whole-kv33e.xml | 39 +
.../local/prospr-6dpf-1-whole-lbx1b.xml | 39 +
.../local/prospr-6dpf-1-whole-leucin-rich.xml | 39 +
.../local/prospr-6dpf-1-whole-lhx15.xml | 39 +
.../images/local/prospr-6dpf-1-whole-lhx2.xml | 39 +
.../images/local/prospr-6dpf-1-whole-lhx3.xml | 39 +
.../images/local/prospr-6dpf-1-whole-lhx6.xml | 39 +
.../images/local/prospr-6dpf-1-whole-lmo4.xml | 39 +
.../images/local/prospr-6dpf-1-whole-lmx1.xml | 39 +
.../local/prospr-6dpf-1-whole-loc28250.xml | 39 +
.../local/prospr-6dpf-1-whole-loc5285ct.xml | 39 +
.../local/prospr-6dpf-1-whole-loc77859.xml | 39 +
.../local/prospr-6dpf-1-whole-loc8913nt.xml | 39 +
.../images/local/prospr-6dpf-1-whole-maf.xml | 39 +
.../local/prospr-6dpf-1-whole-mecom.xml | 39 +
.../local/prospr-6dpf-1-whole-mhcl4.xml | 39 +
.../images/local/prospr-6dpf-1-whole-mitf.xml | 39 +
.../local/prospr-6dpf-1-whole-mrlc2.xml | 39 +
.../images/local/prospr-6dpf-1-whole-msx.xml | 39 +
.../local/prospr-6dpf-1-whole-mthfsd.xml | 39 +
.../local/prospr-6dpf-1-whole-munc22.xml | 39 +
.../local/prospr-6dpf-1-whole-muncb.xml | 39 +
.../local/prospr-6dpf-1-whole-nachr.xml | 39 +
.../local/prospr-6dpf-1-whole-nb5r3.xml | 39 +
.../local/prospr-6dpf-1-whole-ndus1.xml | 39 +
.../images/local/prospr-6dpf-1-whole-neog.xml | 39 +
.../local/prospr-6dpf-1-whole-netrin.xml | 39 +
.../local/prospr-6dpf-1-whole-neurod.xml | 39 +
.../images/local/prospr-6dpf-1-whole-ngb.xml | 39 +
.../images/local/prospr-6dpf-1-whole-ngn.xml | 39 +
.../images/local/prospr-6dpf-1-whole-nk21.xml | 39 +
.../images/local/prospr-6dpf-1-whole-nk22.xml | 39 +
.../images/local/prospr-6dpf-1-whole-nk6.xml | 39 +
.../local/prospr-6dpf-1-whole-nmdar.xml | 39 +
.../images/local/prospr-6dpf-1-whole-noe1.xml | 39 +
.../local/prospr-6dpf-1-whole-nompc3.xml | 39 +
.../prospr-6dpf-1-whole-non-muscle-mhc.xml | 39 +
.../images/local/prospr-6dpf-1-whole-nov2.xml | 39 +
.../local/prospr-6dpf-1-whole-nov29.xml | 39 +
.../local/prospr-6dpf-1-whole-npr1a.xml | 39 +
.../local/prospr-6dpf-1-whole-ntrps.xml | 39 +
.../local/prospr-6dpf-1-whole-nucleolin.xml | 39 +
.../images/local/prospr-6dpf-1-whole-odo2.xml | 39 +
.../images/local/prospr-6dpf-1-whole-olig.xml | 39 +
.../local/prospr-6dpf-1-whole-olm2a.xml | 39 +
.../images/local/prospr-6dpf-1-whole-otp.xml | 39 +
.../images/local/prospr-6dpf-1-whole-p56.xml | 39 +
.../local/prospr-6dpf-1-whole-paraxis.xml | 39 +
.../local/prospr-6dpf-1-whole-patched.xml | 39 +
.../local/prospr-6dpf-1-whole-pax258.xml | 39 +
.../images/local/prospr-6dpf-1-whole-pax6.xml | 39 +
.../local/prospr-6dpf-1-whole-pcdh15.xml | 39 +
.../images/local/prospr-6dpf-1-whole-pde9.xml | 39 +
.../images/local/prospr-6dpf-1-whole-pdf.xml | 39 +
.../images/local/prospr-6dpf-1-whole-pea3.xml | 39 +
.../images/local/prospr-6dpf-1-whole-pgam.xml | 39 +
.../images/local/prospr-6dpf-1-whole-phc2.xml | 39 +
.../local/prospr-6dpf-1-whole-phox2b.xml | 39 +
.../local/prospr-6dpf-1-whole-pikachu.xml | 39 +
.../local/prospr-6dpf-1-whole-pitxb.xml | 39 +
.../images/local/prospr-6dpf-1-whole-pkd1.xml | 39 +
.../images/local/prospr-6dpf-1-whole-pkd2.xml | 39 +
.../images/local/prospr-6dpf-1-whole-plcg.xml | 39 +
.../images/local/prospr-6dpf-1-whole-ppib.xml | 39 +
.../local/prospr-6dpf-1-whole-prdm8.xml | 39 +
.../images/local/prospr-6dpf-1-whole-prox.xml | 39 +
.../local/prospr-6dpf-1-whole-psmf1.xml | 39 +
.../images/local/prospr-6dpf-1-whole-ptf1.xml | 39 +
.../images/local/prospr-6dpf-1-whole-rab3.xml | 39 +
.../images/local/prospr-6dpf-1-whole-rims.xml | 39 +
.../images/local/prospr-6dpf-1-whole-robo.xml | 39 +
.../images/local/prospr-6dpf-1-whole-rpc2.xml | 39 +
.../prospr-6dpf-1-whole-rx.xml} | 2 +-
.../images/local/prospr-6dpf-1-whole-ryr2.xml | 39 +
.../local/prospr-6dpf-1-whole-scn8aa.xml | 39 +
...rospr-6dpf-1-whole-segmented-allglands.xml | 39 +
...-6dpf-1-whole-segmented-crypticsegment.xml | 39 +
.../prospr-6dpf-1-whole-segmented-foregut.xml | 39 +
.../prospr-6dpf-1-whole-segmented-glands.xml | 39 +
.../prospr-6dpf-1-whole-segmented-head.xml | 39 +
...6dpf-1-whole-segmented-lateralectoderm.xml | 39 +
...spr-6dpf-1-whole-segmented-prospr6-ref.xml | 39 +
...prospr-6dpf-1-whole-segmented-pygidium.xml | 39 +
...pr-6dpf-1-whole-segmented-restofanimal.xml | 39 +
.../prospr-6dpf-1-whole-segmented-vnc.xml | 39 +
.../local/prospr-6dpf-1-whole-sema2.xml | 39 +
.../images/local/prospr-6dpf-1-whole-sert.xml | 39 +
.../images/local/prospr-6dpf-1-whole-sim1.xml | 39 +
.../local/prospr-6dpf-1-whole-six12.xml | 39 +
.../images/local/prospr-6dpf-1-whole-six4.xml | 39 +
.../images/local/prospr-6dpf-1-whole-slit.xml | 39 +
.../images/local/prospr-6dpf-1-whole-snd1.xml | 39 +
.../images/local/prospr-6dpf-1-whole-sox2.xml | 39 +
.../images/local/prospr-6dpf-1-whole-sox4.xml | 39 +
.../local/prospr-6dpf-1-whole-soxb12.xml | 39 +
.../local/prospr-6dpf-1-whole-soxb2.xml | 39 +
.../images/local/prospr-6dpf-1-whole-sp8.xml | 39 +
.../local/prospr-6dpf-1-whole-stathmin.xml | 39 +
.../prospr-6dpf-1-whole-synaptopodin.xml | 39 +
.../images/local/prospr-6dpf-1-whole-syt.xml | 39 +
.../local/prospr-6dpf-1-whole-syt12.xml | 39 +
.../images/local/prospr-6dpf-1-whole-syt7.xml | 39 +
.../images/local/prospr-6dpf-1-whole-syta.xml | 39 +
.../images/local/prospr-6dpf-1-whole-tal.xml | 39 +
.../images/local/prospr-6dpf-1-whole-tbh.xml | 39 +
.../local/prospr-6dpf-1-whole-tbx20.xml | 39 +
.../prospr-6dpf-1-whole-th.xml} | 2 +-
.../images/local/prospr-6dpf-1-whole-timp.xml | 39 +
.../images/local/prospr-6dpf-1-whole-tlx.xml | 39 +
.../local/prospr-6dpf-1-whole-tmtc3.xml | 39 +
.../images/local/prospr-6dpf-1-whole-trk.xml | 39 +
.../images/local/prospr-6dpf-1-whole-trph.xml | 39 +
.../images/local/prospr-6dpf-1-whole-trpv.xml | 39 +
.../local/prospr-6dpf-1-whole-trpv4.xml | 39 +
.../local/prospr-6dpf-1-whole-trpv5.xml | 39 +
.../local/prospr-6dpf-1-whole-twist.xml | 39 +
.../local/prospr-6dpf-1-whole-unc22.xml | 39 +
.../images/local/prospr-6dpf-1-whole-uncs.xml | 39 +
.../images/local/prospr-6dpf-1-whole-uncx.xml | 39 +
.../images/local/prospr-6dpf-1-whole-upp.xml | 39 +
.../local/prospr-6dpf-1-whole-usp9x.xml | 39 +
.../local/prospr-6dpf-1-whole-vacht.xml | 39 +
.../local/prospr-6dpf-1-whole-vat1l.xml | 39 +
.../local/prospr-6dpf-1-whole-vegfr.xml | 39 +
.../local/prospr-6dpf-1-whole-vglut.xml | 39 +
.../prospr-6dpf-1-whole-virtual-cells.xml | 39 +
.../local/prospr-6dpf-1-whole-wnt16.xml | 39 +
.../images/local/prospr-6dpf-1-whole-wnt5.xml | 39 +
.../{ => local}/sbem-6dpf-1-whole-raw.xml | 2 +-
.../sbem-6dpf-1-whole-segmented-cells.xml} | 2 +-
...sbem-6dpf-1-whole-segmented-chromatin.xml} | 2 +-
.../sbem-6dpf-1-whole-segmented-cilia.xml} | 2 +-
...m-6dpf-1-whole-segmented-extrapolated.xml} | 2 +-
.../sbem-6dpf-1-whole-segmented-inside.xml} | 2 +-
.../sbem-6dpf-1-whole-segmented-muscle.xml | 2 +-
.../sbem-6dpf-1-whole-segmented-neuropil.xml} | 2 +-
.../sbem-6dpf-1-whole-segmented-nuclei.xml} | 2 +-
.../sbem-6dpf-1-whole-segmented-outside.xml} | 2 +-
.../sbem-6dpf-1-whole-segmented-resin.xml} | 2 +-
.../sbem-6dpf-1-whole-segmented-tissue.xml} | 2 +-
.../images/prospr-6dpf-1-whole-ASCb-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-AllCR1-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-AllCR2-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Arx-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Ash-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-BAIAP-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-BarH1-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Beta3-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Bmpr1-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Brn124-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Brn3a-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-COE-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Cal2-MED.xml | 39 -
.../prospr-6dpf-1-whole-Calmodulin-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-ChAT-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Chx10-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Dach-MED.xml | 39 -
.../prospr-6dpf-1-whole-DbhLike-MED.xml | 39 -
.../prospr-6dpf-1-whole-DopaRD2-MED.xml | 39 -
.../prospr-6dpf-1-whole-ENR1-PGAM-MED.xml | 39 -
.../prospr-6dpf-1-whole-ENR10-UPP-MED.xml | 39 -
.../prospr-6dpf-1-whole-ENR12-UNC22-MED.xml | 39 -
.../prospr-6dpf-1-whole-ENR13-NDUS1-MED.xml | 39 -
.../prospr-6dpf-1-whole-ENR16-ODO2-MED.xml | 39 -
...prospr-6dpf-1-whole-ENR19-FboxLike-MED.xml | 39 -
.../prospr-6dpf-1-whole-ENR2-RYR2-MED.xml | 39 -
.../prospr-6dpf-1-whole-ENR20-PPIB-MED.xml | 39 -
.../prospr-6dpf-1-whole-ENR22-CO1A1-MED.xml | 39 -
...pr-6dpf-1-whole-ENR25-Synaptopodin-MED.xml | 39 -
.../prospr-6dpf-1-whole-ENR29-USP9X-MED.xml | 39 -
.../prospr-6dpf-1-whole-ENR3-JKIP3-MED.xml | 39 -
.../prospr-6dpf-1-whole-ENR30-CCG5-MED.xml | 39 -
...spr-6dpf-1-whole-ENR31-Leucin-rich-MED.xml | 39 -
.../prospr-6dpf-1-whole-ENR32-GRIK3-MED.xml | 39 -
.../prospr-6dpf-1-whole-ENR34-MTHFSD-MED.xml | 39 -
.../prospr-6dpf-1-whole-ENR39-RPC2-MED.xml | 39 -
.../prospr-6dpf-1-whole-ENR4-SND1-MED.xml | 39 -
...spr-6dpf-1-whole-ENR46-Calexcitin2-MED.xml | 39 -
...ospr-6dpf-1-whole-ENR54-Boule-like-MED.xml | 39 -
...r-6dpf-1-whole-ENR57-Junctophilin1-MED.xml | 39 -
...prospr-6dpf-1-whole-ENR6-Nucleolin-MED.xml | 39 -
.../prospr-6dpf-1-whole-ENR62-NB5R3-MED.xml | 39 -
.../prospr-6dpf-1-whole-ENR64-PSMF1-MED.xml | 39 -
.../prospr-6dpf-1-whole-ENR69-BCA1-MED.xml | 39 -
.../prospr-6dpf-1-whole-ENR71-Patched-MED.xml | 39 -
...r-6dpf-1-whole-ENR8-Non-muscle-MHC-MED.xml | 39 -
.../prospr-6dpf-1-whole-ENR9-NOE1-MED.xml | 39 -
.../prospr-6dpf-1-whole-Edu42to48-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-ElaV-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-FOR-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-FVRI-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-FoxD3-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-FoxN4-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-GAD-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-GCB-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-GCD-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-GPCR2-MED.xml | 39 -
.../prospr-6dpf-1-whole-GPCR203-MED.xml | 39 -
.../prospr-6dpf-1-whole-GPCR209-MED.xml | 39 -
.../prospr-6dpf-1-whole-GPCR210-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-GPCR32-MED.xml | 39 -
.../prospr-6dpf-1-whole-GPPCR21-MED.xml | 39 -
.../prospr-6dpf-1-whole-Gata123-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Glt1-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-GlyT-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-GnRH-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-GnrhR-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Grm7-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Gucy-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-HCN1-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-HNF6-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Hand-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Hb9-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Hox4-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Hox7-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Hr38-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Isl-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Kv33b-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Kv33e-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Lhx15-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Lhx2-MED.xml | 39 -
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.../prospr-6dpf-1-whole-Loc28250-MED.xml | 39 -
.../prospr-6dpf-1-whole-Loc5285ct-MED.xml | 39 -
.../prospr-6dpf-1-whole-Loc77859-MED.xml | 39 -
.../prospr-6dpf-1-whole-Loc8913nt-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-MHCL4-MED.xml | 39 -
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.../images/prospr-6dpf-1-whole-Mitf-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Munc22-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-NMDAR-MED.xml | 39 -
...ospr-6dpf-1-whole-NOV1-globin-like-MED.xml | 39 -
.../prospr-6dpf-1-whole-NOV15-OLM2A-MED.xml | 39 -
.../prospr-6dpf-1-whole-NOV18-CEPU1-MED.xml | 39 -
.../prospr-6dpf-1-whole-NOV2-NOV2-MED.xml | 39 -
.../prospr-6dpf-1-whole-NOV29-NOV29-MED.xml | 39 -
.../prospr-6dpf-1-whole-NOV45-TMTC3-MED.xml | 39 -
.../prospr-6dpf-1-whole-NOV50-GDPD1-MED.xml | 39 -
.../prospr-6dpf-1-whole-NOV52-KANL3-MED.xml | 39 -
.../prospr-6dpf-1-whole-NOV6-Stathmin-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-NPR1a-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Netrin-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-NeuroD-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Ngb-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Olig-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-P56-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-PCDH15-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-PDF-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-PLCg-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Pax258-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Pax6-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Pde9-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Pea3-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Phc2-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Phox2b-MED.xml | 39 -
.../prospr-6dpf-1-whole-Pikachu-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-PitxB-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Prdm8-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Prox-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Ptf1-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-RIMS-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Rab3-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Robo-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Scn8aa-MED.xml | 39 -
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.../images/prospr-6dpf-1-whole-Sim1-MED.xml | 39 -
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.../images/prospr-6dpf-1-whole-Sox2-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Sox4-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-SoxB12-MED.xml | 39 -
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.../images/prospr-6dpf-1-whole-TIMP-MED.xml | 39 -
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.../images/prospr-6dpf-1-whole-Tbh-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Tbx20-MED.xml | 39 -
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.../images/prospr-6dpf-1-whole-Twist-MED.xml | 39 -
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.../images/prospr-6dpf-1-whole-VAChT-MED.xml | 39 -
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.../images/prospr-6dpf-1-whole-VegfR-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Wnt16-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-Wnt5-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-ascI-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-ascII-MED.xml | 39 -
.../prospr-6dpf-1-whole-asicalpha-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-ato2-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-bsx-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-catL-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-cnga-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-dbx1-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-delta-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-dlx-MED.xml | 39 -
.../prospr-6dpf-1-whole-edu3to4at6dpf-MED.xml | 39 -
.../prospr-6dpf-1-whole-edu4to5at6dpf-MED.xml | 39 -
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.../images/prospr-6dpf-1-whole-eve-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-eya-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-fezf-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-gpb-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-gsx-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-hox1-MED.xml | 39 -
.../prospr-6dpf-1-whole-irx2546-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-irx6-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-lbx1b-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-lhx6-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-mecom-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-msx-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-muncB-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-nAchR-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-neog-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-ngn-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-nk21-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-nk22-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-nk6-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-nompc3-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-ntrps-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-otp-MED.xml | 39 -
.../prospr-6dpf-1-whole-paraxis-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-pkd1-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-pkd2-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-rx-MED.xml | 39 -
...rospr-6dpf-1-whole-segmented-AllGlands.xml | 39 -
...-6dpf-1-whole-segmented-CrypticSegment.xml | 39 -
.../prospr-6dpf-1-whole-segmented-Glands.xml | 39 -
.../prospr-6dpf-1-whole-segmented-Head.xml | 39 -
.../prospr-6dpf-1-whole-segmented-PNS.xml | 39 -
...spr-6dpf-1-whole-segmented-ProSPr6-Ref.xml | 39 -
...prospr-6dpf-1-whole-segmented-Pygidium.xml | 39 -
...pr-6dpf-1-whole-segmented-RestOfAnimal.xml | 39 -
...rospr-6dpf-1-whole-segmented-Stomodeum.xml | 39 -
.../prospr-6dpf-1-whole-segmented-VNC.xml | 39 -
.../images/prospr-6dpf-1-whole-sert-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-six12-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-six4-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-tlx-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-trk-MED.xml | 39 -
.../images/prospr-6dpf-1-whole-uncx-MED.xml | 39 -
data/0.6.2/misc/bdv_server.txt | 229 ---
data/0.6.2/misc/dynamic_segmentations.json | 29 +
...ospr-6dpf-1-whole-virtual-cells-labels.xml | 39 -
.../default.csv | 1 -
.../profile_clust_curated.csv | 1 -
.../additional_tables.txt | 0
.../default.csv | 1 +
.../profile_clust_curated.csv | 1 +
.../cells_to_nuclei.csv | 1 -
.../default.csv | 1 -
.../extrapolated_intensity_correction.csv | 1 -
.../genes.csv | 1 -
.../morphology.csv | 1 -
.../regions.csv | 1 -
.../vc_assignments.csv | 1 -
.../additional_tables.txt | 0
.../cells_to_nuclei.csv | 1 +
.../default.csv | 1 +
.../extrapolated_intensity_correction.csv | 1 +
.../genes.csv | 1 +
.../morphology.csv | 1 +
.../regions.csv | 1 +
.../vc_assignments.csv | 1 +
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.../default.csv | 1 +
.../additional_tables.txt | 0
.../cell_mapping.csv | 0
.../default.csv | 0
.../morphology.csv | 0
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.../extrapolated_intensity_correction.csv | 1 -
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.../additional_tables.txt | 0
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.../default.csv | 1 -
.../default.csv | 1 +
478 files changed, 10147 insertions(+), 8527 deletions(-)
create mode 100644 data/0.6.2/images/images.json
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-ache.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-allcr1.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-allcr2.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-anpra.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-anprb.xml
rename data/0.6.2/images/{prospr-6dpf-1-whole-ANPRB-MED.xml => local/prospr-6dpf-1-whole-ap2.xml} (91%)
rename data/0.6.2/images/{prospr-6dpf-1-whole-AP2-MED.xml => local/prospr-6dpf-1-whole-arx.xml} (91%)
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-ascb.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-asci.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-ascii.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-ash.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-asicalpha.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-ato2.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-baiap.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-barh1.xml
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create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-beta3.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-bmpr1.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-boule-like.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-brn124.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-brn3a.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-bsx.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-cal2.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-calexcitin2.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-calmodulin.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-catl.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-ccvd.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-cepu1.xml
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create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-chx10.xml
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create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-edu3to4at6dpf.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-edu42to48.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-edu4to5at6dpf.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-edu5to6at6dpf.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-elav.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-eve.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-eya.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-fezf.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-for.xml
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create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-fvri.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-fxl21.xml
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create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-gata123.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-gcb.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-gcd.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-gdpd1.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-globin-like.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-glt1.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-glyt.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-gnrh.xml
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create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-gpcr203.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-gpcr209.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-gpcr210.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-gpcr32.xml
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create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-grik3.xml
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create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-gsx.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-gucy.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-hand.xml
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create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-hnf6.xml
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create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-hox4.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-hox7.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-hr38.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-irx2546.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-irx6.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-isl.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-jkip3.xml
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create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-kanl3.xml
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create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-kv33e.xml
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create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-leucin-rich.xml
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create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-loc77859.xml
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create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-mhcl4.xml
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create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-nachr.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-nb5r3.xml
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create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-neog.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-netrin.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-neurod.xml
create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-ngb.xml
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create mode 100644 data/0.6.2/images/local/prospr-6dpf-1-whole-nk21.xml
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delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-Robo-MED.xml
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delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-Sema2-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-Sim1-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-Slit-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-Sox2-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-Sox4-MED.xml
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delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-Sp8-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-Syt-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-Syt12-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-Syt7-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-Syta-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-TH-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-TIMP-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-TRPV4-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-TRPV5-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-Tal-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-Tbh-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-Tbx20-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-TrpH-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-TrpV-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-Twist-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-UNCS-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-VAChT-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-VAT1L-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-VGluT-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-VegfR-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-Wnt16-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-Wnt5-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-ascI-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-ascII-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-asicalpha-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-ato2-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-bsx-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-catL-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-cnga-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-dbx1-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-delta-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-dlx-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-edu3to4at6dpf-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-edu4to5at6dpf-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-edu5to6at6dpf-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-eve-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-eya-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-fezf-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-gpb-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-gsx-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-hox1-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-irx2546-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-irx6-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-lbx1b-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-lhx6-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-mecom-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-msx-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-muncB-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-nAchR-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-neog-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-ngn-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-nk21-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-nk22-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-nk6-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-nompc3-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-ntrps-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-otp-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-paraxis-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-pkd1-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-pkd2-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-rx-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-segmented-AllGlands.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-segmented-CrypticSegment.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-segmented-Glands.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-segmented-Head.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-segmented-PNS.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-segmented-ProSPr6-Ref.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-segmented-Pygidium.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-segmented-RestOfAnimal.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-segmented-Stomodeum.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-segmented-VNC.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-sert-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-six12-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-six4-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-tlx-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-trk-MED.xml
delete mode 100644 data/0.6.2/images/prospr-6dpf-1-whole-uncx-MED.xml
delete mode 100644 data/0.6.2/misc/bdv_server.txt
create mode 100644 data/0.6.2/misc/dynamic_segmentations.json
delete mode 100644 data/0.6.2/segmentations/prospr-6dpf-1-whole-virtual-cells-labels.xml
delete mode 120000 data/0.6.2/tables/prospr-6dpf-1-whole-virtual-cells-labels/default.csv
delete mode 120000 data/0.6.2/tables/prospr-6dpf-1-whole-virtual-cells-labels/profile_clust_curated.csv
rename data/0.6.2/tables/{prospr-6dpf-1-whole-virtual-cells-labels => prospr-6dpf-1-whole-virtual-cells}/additional_tables.txt (100%)
create mode 120000 data/0.6.2/tables/prospr-6dpf-1-whole-virtual-cells/default.csv
create mode 120000 data/0.6.2/tables/prospr-6dpf-1-whole-virtual-cells/profile_clust_curated.csv
delete mode 120000 data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/cells_to_nuclei.csv
delete mode 120000 data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/default.csv
delete mode 120000 data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/extrapolated_intensity_correction.csv
delete mode 120000 data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/genes.csv
delete mode 120000 data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/morphology.csv
delete mode 120000 data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/regions.csv
delete mode 120000 data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/vc_assignments.csv
rename data/0.6.2/tables/{sbem-6dpf-1-whole-segmented-cells-labels => sbem-6dpf-1-whole-segmented-cells}/additional_tables.txt (100%)
create mode 120000 data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/cells_to_nuclei.csv
create mode 120000 data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/default.csv
create mode 120000 data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/extrapolated_intensity_correction.csv
create mode 120000 data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/genes.csv
create mode 120000 data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/morphology.csv
create mode 120000 data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/regions.csv
create mode 120000 data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/vc_assignments.csv
delete mode 120000 data/0.6.2/tables/sbem-6dpf-1-whole-segmented-chromatin-labels/default.csv
create mode 120000 data/0.6.2/tables/sbem-6dpf-1-whole-segmented-chromatin/default.csv
rename data/0.6.2/tables/{sbem-6dpf-1-whole-segmented-cilia-labels => sbem-6dpf-1-whole-segmented-cilia}/additional_tables.txt (100%)
rename data/0.6.2/tables/{sbem-6dpf-1-whole-segmented-cilia-labels => sbem-6dpf-1-whole-segmented-cilia}/cell_mapping.csv (100%)
rename data/0.6.2/tables/{sbem-6dpf-1-whole-segmented-cilia-labels => sbem-6dpf-1-whole-segmented-cilia}/default.csv (100%)
rename data/0.6.2/tables/{sbem-6dpf-1-whole-segmented-cilia-labels => sbem-6dpf-1-whole-segmented-cilia}/morphology.csv (100%)
delete mode 120000 data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/default.csv
delete mode 120000 data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/extrapolated_intensity_correction.csv
delete mode 120000 data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/morphology.csv
rename data/0.6.2/tables/{sbem-6dpf-1-whole-segmented-nuclei-labels => sbem-6dpf-1-whole-segmented-nuclei}/additional_tables.txt (100%)
create mode 120000 data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei/default.csv
create mode 120000 data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei/extrapolated_intensity_correction.csv
create mode 120000 data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei/morphology.csv
delete mode 120000 data/0.6.2/tables/sbem-6dpf-1-whole-segmented-tissue-labels/default.csv
create mode 120000 data/0.6.2/tables/sbem-6dpf-1-whole-segmented-tissue/default.csv
diff --git a/data/0.6.2/images/images.json b/data/0.6.2/images/images.json
new file mode 100644
index 0000000..3788a8e
--- /dev/null
+++ b/data/0.6.2/images/images.json
@@ -0,0 +1,1820 @@
+{
+ "prospr-6dpf-1-whole-ache": {
+ "Color": "Magenta",
+ "MaxValue": 1000,
+ "MinValue": 0,
+ "Storage": {
+ "local": "local/prospr-6dpf-1-whole-ache.xml"
+ }
+ },
+ "prospr-6dpf-1-whole-allcr1": {
+ "Color": "Magenta",
+ "MaxValue": 1000,
+ "MinValue": 0,
+ "Storage": {
+ "local": "local/prospr-6dpf-1-whole-allcr1.xml"
+ }
+ },
+ "prospr-6dpf-1-whole-allcr2": {
+ "Color": "Magenta",
+ "MaxValue": 1000,
+ "MinValue": 0,
+ "Storage": {
+ "local": "local/prospr-6dpf-1-whole-allcr2.xml"
+ }
+ },
+ "prospr-6dpf-1-whole-anpra": {
+ "Color": "Magenta",
+ "MaxValue": 1000,
+ "MinValue": 0,
+ "Storage": {
+ "local": "local/prospr-6dpf-1-whole-anpra.xml"
+ }
+ },
+ "prospr-6dpf-1-whole-anprb": {
+ "Color": "Magenta",
+ "MaxValue": 1000,
+ "MinValue": 0,
+ "Storage": {
+ "local": "local/prospr-6dpf-1-whole-anprb.xml"
+ }
+ },
+ "prospr-6dpf-1-whole-ap2": {
+ "Color": "Magenta",
+ "MaxValue": 1000,
+ "MinValue": 0,
+ "Storage": {
+ "local": "local/prospr-6dpf-1-whole-ap2.xml"
+ }
+ },
+ "prospr-6dpf-1-whole-arx": {
+ "Color": "Magenta",
+ "MaxValue": 1000,
+ "MinValue": 0,
+ "Storage": {
+ "local": "local/prospr-6dpf-1-whole-arx.xml"
+ }
+ },
+ "prospr-6dpf-1-whole-ascb": {
+ "Color": "Magenta",
+ "MaxValue": 1000,
+ "MinValue": 0,
+ "Storage": {
+ "local": "local/prospr-6dpf-1-whole-ascb.xml"
+ }
+ },
+ "prospr-6dpf-1-whole-asci": {
+ "Color": "Magenta",
+ "MaxValue": 1000,
+ "MinValue": 0,
+ "Storage": {
+ "local": "local/prospr-6dpf-1-whole-asci.xml"
+ }
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+ "MaxValue": 1000,
+ "MinValue": 0,
+ "Storage": {
+ "local": "local/prospr-6dpf-1-whole-ascii.xml"
+ }
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+ "MaxValue": 1000,
+ "MinValue": 0,
+ "Storage": {
+ "local": "local/prospr-6dpf-1-whole-ash.xml"
+ }
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+ "MaxValue": 1000,
+ "MinValue": 0,
+ "Storage": {
+ "local": "local/prospr-6dpf-1-whole-asicalpha.xml"
+ }
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+ "MaxValue": 1000,
+ "MinValue": 0,
+ "Storage": {
+ "local": "local/prospr-6dpf-1-whole-ato2.xml"
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+ "MaxValue": 1000,
+ "MinValue": 0,
+ "Storage": {
+ "local": "local/prospr-6dpf-1-whole-baiap.xml"
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+ "Color": "Magenta",
+ "MaxValue": 1000,
+ "MinValue": 0,
+ "Storage": {
+ "local": "local/prospr-6dpf-1-whole-barh1.xml"
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+ "MaxValue": 1000,
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+ "Storage": {
+ "local": "local/prospr-6dpf-1-whole-bca1.xml"
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+ "Storage": {
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+ "MaxValue": 1000,
+ "MinValue": 0,
+ "Storage": {
+ "local": "local/prospr-6dpf-1-whole-bmpr1.xml"
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+ "MaxValue": 1000,
+ "MinValue": 0,
+ "Storage": {
+ "local": "local/prospr-6dpf-1-whole-boule-like.xml"
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+ "MaxValue": 1000,
+ "MinValue": 0,
+ "Storage": {
+ "local": "local/prospr-6dpf-1-whole-brn124.xml"
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+ "MaxValue": 1000,
+ "MinValue": 0,
+ "Storage": {
+ "local": "local/prospr-6dpf-1-whole-brn3a.xml"
+ }
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+ "MaxValue": 1000,
+ "MinValue": 0,
+ "Storage": {
+ "local": "local/prospr-6dpf-1-whole-bsx.xml"
+ }
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+ "MaxValue": 1000,
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+ "Storage": {
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+ "MaxValue": 1000,
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+ "Storage": {
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+ "Color": "Magenta",
+ "MaxValue": 1000,
+ "MinValue": 0,
+ "Storage": {
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+ "Color": "Magenta",
+ "MaxValue": 1000,
+ "MinValue": 0,
+ "Storage": {
+ "local": "local/prospr-6dpf-1-whole-cnga.xml"
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+ "MaxValue": 1000,
+ "MinValue": 0,
+ "Storage": {
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+ "MaxValue": 1000,
+ "MinValue": 0,
+ "Storage": {
+ "local": "local/prospr-6dpf-1-whole-coe.xml"
+ }
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+ "prospr-6dpf-1-whole-dach": {
+ "Color": "Magenta",
+ "MaxValue": 1000,
+ "MinValue": 0,
+ "Storage": {
+ "local": "local/prospr-6dpf-1-whole-dach.xml"
+ }
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+ "prospr-6dpf-1-whole-dbhlike": {
+ "Color": "Magenta",
+ "MaxValue": 1000,
+ "MinValue": 0,
+ "Storage": {
+ "local": "local/prospr-6dpf-1-whole-dbhlike.xml"
+ }
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+ "prospr-6dpf-1-whole-dbx1": {
+ "Color": "Magenta",
+ "MaxValue": 1000,
+ "MinValue": 0,
+ "Storage": {
+ "local": "local/prospr-6dpf-1-whole-dbx1.xml"
+ }
+ },
+ "prospr-6dpf-1-whole-delta": {
+ "Color": "Magenta",
+ "MaxValue": 1000,
+ "MinValue": 0,
+ "Storage": {
+ "local": "local/prospr-6dpf-1-whole-delta.xml"
+ }
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+ "TableFolder": "tables/sbem-6dpf-1-whole-segmented-chromatin"
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+ "Storage": {
+ "local": "local/sbem-6dpf-1-whole-segmented-cilia.xml"
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+ "MinValue": 0,
+ "Storage": {
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+}
\ No newline at end of file
diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-ache.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-ache.xml
new file mode 100644
index 0000000..5d18659
--- /dev/null
+++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-ache.xml
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+</SpimData>
diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-allcr1.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-allcr1.xml
new file mode 100644
index 0000000..1223b80
--- /dev/null
+++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-allcr1.xml
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+<SpimData version="0.2">
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+ <SequenceDescription>
+ <ImageLoader format="bdv.hdf5">
+ <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-allcr1.h5</hdf5>
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+ <voxelSize>
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diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-allcr2.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-allcr2.xml
new file mode 100644
index 0000000..b4c10d4
--- /dev/null
+++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-allcr2.xml
@@ -0,0 +1,39 @@
+<SpimData version="0.2">
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+ <SequenceDescription>
+ <ImageLoader format="bdv.hdf5">
+ <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-allcr2.h5</hdf5>
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+ <unit>micrometer</unit>
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new file mode 100644
index 0000000..8c10d30
--- /dev/null
+++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-anpra.xml
@@ -0,0 +1,39 @@
+<SpimData version="0.2">
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+ <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-anpra.h5</hdf5>
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new file mode 100644
index 0000000..f3d3c94
--- /dev/null
+++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-anprb.xml
@@ -0,0 +1,39 @@
+<SpimData version="0.2">
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+ <SequenceDescription>
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diff --git a/data/0.6.2/images/prospr-6dpf-1-whole-ANPRB-MED.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-ap2.xml
similarity index 91%
rename from data/0.6.2/images/prospr-6dpf-1-whole-ANPRB-MED.xml
rename to data/0.6.2/images/local/prospr-6dpf-1-whole-ap2.xml
index c300b50..40bd5cb 100644
--- a/data/0.6.2/images/prospr-6dpf-1-whole-ANPRB-MED.xml
+++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-ap2.xml
@@ -2,7 +2,7 @@
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<SequenceDescription>
<ImageLoader format="bdv.hdf5">
- <hdf5 type="relative">../../0.5.4/images/prospr-6dpf-1-whole-ANPRB-MED.h5</hdf5>
+ <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-ap2.h5</hdf5>
</ImageLoader>
<ViewSetups>
<Attributes name="channel">
diff --git a/data/0.6.2/images/prospr-6dpf-1-whole-AP2-MED.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-arx.xml
similarity index 91%
rename from data/0.6.2/images/prospr-6dpf-1-whole-AP2-MED.xml
rename to data/0.6.2/images/local/prospr-6dpf-1-whole-arx.xml
index 28a6e91..76a0b84 100644
--- a/data/0.6.2/images/prospr-6dpf-1-whole-AP2-MED.xml
+++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-arx.xml
@@ -2,7 +2,7 @@
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<SequenceDescription>
<ImageLoader format="bdv.hdf5">
- <hdf5 type="relative">../../0.5.4/images/prospr-6dpf-1-whole-AP2-MED.h5</hdf5>
+ <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-arx.h5</hdf5>
</ImageLoader>
<ViewSetups>
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new file mode 100644
index 0000000..222e4ee
--- /dev/null
+++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-ascb.xml
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new file mode 100644
index 0000000..8a900b9
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new file mode 100644
index 0000000..26a8110
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new file mode 100644
index 0000000..054383c
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new file mode 100644
index 0000000..5ea58cc
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new file mode 100644
index 0000000..4d0c4cd
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new file mode 100644
index 0000000..fb04c9c
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@@ -0,0 +1,39 @@
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index 0000000..96df868
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new file mode 100644
index 0000000..36bca9b
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new file mode 100644
index 0000000..77ce783
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diff --git a/data/0.6.2/images/prospr-6dpf-1-whole-AChE-MED.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-rx.xml
similarity index 91%
rename from data/0.6.2/images/prospr-6dpf-1-whole-AChE-MED.xml
rename to data/0.6.2/images/local/prospr-6dpf-1-whole-rx.xml
index 92f6497..68cafe3 100644
--- a/data/0.6.2/images/prospr-6dpf-1-whole-AChE-MED.xml
+++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-rx.xml
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new file mode 100644
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new file mode 100644
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index 0000000..1028e09
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index 0000000..76ea43b
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new file mode 100644
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new file mode 100644
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new file mode 100644
index 0000000..b7db1ef
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new file mode 100644
index 0000000..995a259
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new file mode 100644
index 0000000..bd7629e
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diff --git a/data/0.6.2/images/prospr-6dpf-1-whole-ANPRA-MED.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-th.xml
similarity index 91%
rename from data/0.6.2/images/prospr-6dpf-1-whole-ANPRA-MED.xml
rename to data/0.6.2/images/local/prospr-6dpf-1-whole-th.xml
index b969d2e..e754990 100644
--- a/data/0.6.2/images/prospr-6dpf-1-whole-ANPRA-MED.xml
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@@ -2,7 +2,7 @@
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new file mode 100644
index 0000000..d275ddf
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new file mode 100644
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new file mode 100644
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new file mode 100644
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+ <voxelSize>
+ <unit>micrometer</unit>
+ <size>0.55 0.55 0.55</size>
+ </voxelSize>
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+ </ViewSetup>
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+ <Timepoints type="range">
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+ </ViewTransform>
+ </ViewRegistration>
+ </ViewRegistrations>
+</SpimData>
diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-wnt16.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-wnt16.xml
new file mode 100644
index 0000000..fe09b4b
--- /dev/null
+++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-wnt16.xml
@@ -0,0 +1,39 @@
+<SpimData version="0.2">
+ <BasePath type="relative">.</BasePath>
+ <SequenceDescription>
+ <ImageLoader format="bdv.hdf5">
+ <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-wnt16.h5</hdf5>
+ </ImageLoader>
+ <ViewSetups>
+ <Attributes name="channel">
+ <Channel>
+ <id>0</id>
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+ </Channel>
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+ <ViewSetup>
+ <id>0</id>
+ <name>Setup0</name>
+ <size>500 471 519</size>
+ <voxelSize>
+ <unit>micrometer</unit>
+ <size>0.55 0.55 0.55</size>
+ </voxelSize>
+ <attributes>
+ <channel>0</channel>
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+ </ViewSetup>
+ </ViewSetups>
+ <Timepoints type="range">
+ <first>0</first>
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+ <ViewRegistration setup="0" timepoint="0">
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+ <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine>
+ </ViewTransform>
+ </ViewRegistration>
+ </ViewRegistrations>
+</SpimData>
diff --git a/data/0.6.2/images/local/prospr-6dpf-1-whole-wnt5.xml b/data/0.6.2/images/local/prospr-6dpf-1-whole-wnt5.xml
new file mode 100644
index 0000000..d53ac5d
--- /dev/null
+++ b/data/0.6.2/images/local/prospr-6dpf-1-whole-wnt5.xml
@@ -0,0 +1,39 @@
+<SpimData version="0.2">
+ <BasePath type="relative">.</BasePath>
+ <SequenceDescription>
+ <ImageLoader format="bdv.hdf5">
+ <hdf5 type="relative">../../../0.5.4/images/local/prospr-6dpf-1-whole-wnt5.h5</hdf5>
+ </ImageLoader>
+ <ViewSetups>
+ <Attributes name="channel">
+ <Channel>
+ <id>0</id>
+ <name>0</name>
+ </Channel>
+ </Attributes>
+ <ViewSetup>
+ <id>0</id>
+ <name>Setup0</name>
+ <size>500 471 519</size>
+ <voxelSize>
+ <unit>micrometer</unit>
+ <size>0.55 0.55 0.55</size>
+ </voxelSize>
+ <attributes>
+ <channel>0</channel>
+ </attributes>
+ </ViewSetup>
+ </ViewSetups>
+ <Timepoints type="range">
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+ <ViewRegistrations>
+ <ViewRegistration setup="0" timepoint="0">
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+ <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine>
+ </ViewTransform>
+ </ViewRegistration>
+ </ViewRegistrations>
+</SpimData>
diff --git a/data/0.6.2/images/sbem-6dpf-1-whole-raw.xml b/data/0.6.2/images/local/sbem-6dpf-1-whole-raw.xml
similarity index 92%
rename from data/0.6.2/images/sbem-6dpf-1-whole-raw.xml
rename to data/0.6.2/images/local/sbem-6dpf-1-whole-raw.xml
index fcf8dfd..5bcba36 100644
--- a/data/0.6.2/images/sbem-6dpf-1-whole-raw.xml
+++ b/data/0.6.2/images/local/sbem-6dpf-1-whole-raw.xml
@@ -2,7 +2,7 @@
<BasePath type="relative">.</BasePath>
<SequenceDescription>
<ImageLoader format="bdv.hdf5">
- <hdf5 type="relative">../../rawdata/sbem-6dpf-1-whole-raw.h5</hdf5>
+ <hdf5 type="relative">../../../rawdata/sbem-6dpf-1-whole-raw.h5</hdf5>
</ImageLoader>
<ViewSetups>
<Attributes name="channel">
diff --git a/data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-cells-labels.xml b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-cells.xml
similarity index 90%
rename from data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-cells-labels.xml
rename to data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-cells.xml
index 75dd85c..2f93cae 100644
--- a/data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-cells-labels.xml
+++ b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-cells.xml
@@ -2,7 +2,7 @@
<BasePath type="relative">.</BasePath>
<SequenceDescription>
<ImageLoader format="bdv.hdf5">
- <hdf5 type="relative">../../0.6.1/segmentations/sbem-6dpf-1-whole-segmented-cells-labels.h5</hdf5>
+ <hdf5 type="relative">../../../0.6.1/images/local/sbem-6dpf-1-whole-segmented-cells.h5</hdf5>
</ImageLoader>
<ViewSetups>
<Attributes name="channel">
diff --git a/data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-chromatin-labels.xml b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-chromatin.xml
similarity index 91%
rename from data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-chromatin-labels.xml
rename to data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-chromatin.xml
index 25dd2b4..e1e82b0 100644
--- a/data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-chromatin-labels.xml
+++ b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-chromatin.xml
@@ -2,7 +2,7 @@
<BasePath type="relative">.</BasePath>
<SequenceDescription>
<ImageLoader format="bdv.hdf5">
- <hdf5 type="relative">../../rawdata/sbem-6dpf-1-whole-segmented-chromatin-labels.h5</hdf5>
+ <hdf5 type="relative">../../../rawdata/sbem-6dpf-1-whole-segmented-chromatin.h5</hdf5>
</ImageLoader>
<ViewSetups>
<Attributes name="channel">
diff --git a/data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-cilia-labels.xml b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-cilia.xml
similarity index 92%
rename from data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-cilia-labels.xml
rename to data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-cilia.xml
index f06bacd..cdb5192 100644
--- a/data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-cilia-labels.xml
+++ b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-cilia.xml
@@ -2,7 +2,7 @@
<BasePath type="relative">.</BasePath>
<SequenceDescription>
<ImageLoader format="bdv.hdf5">
- <hdf5 type="relative">sbem-6dpf-1-whole-segmented-cilia-labels.h5</hdf5>
+ <hdf5 type="relative">sbem-6dpf-1-whole-segmented-cilia.h5</hdf5>
</ImageLoader>
<ViewSetups>
<Attributes name="channel">
diff --git a/data/0.6.2/images/sbem-6dpf-1-whole-mask-extrapolated.xml b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-extrapolated.xml
similarity index 91%
rename from data/0.6.2/images/sbem-6dpf-1-whole-mask-extrapolated.xml
rename to data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-extrapolated.xml
index c508249..6eec23b 100644
--- a/data/0.6.2/images/sbem-6dpf-1-whole-mask-extrapolated.xml
+++ b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-extrapolated.xml
@@ -2,7 +2,7 @@
<BasePath type="relative">.</BasePath>
<SequenceDescription>
<ImageLoader format="bdv.hdf5">
- <hdf5 type="relative">../../rawdata/sbem-6dpf-1-whole-mask-extrapolated.h5</hdf5>
+ <hdf5 type="relative">../../../rawdata/sbem-6dpf-1-whole-segmented-extrapolated.h5</hdf5>
</ImageLoader>
<ViewSetups>
<Attributes name="channel">
diff --git a/data/0.6.2/images/sbem-6dpf-1-whole-mask-inside.xml b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-inside.xml
similarity index 91%
rename from data/0.6.2/images/sbem-6dpf-1-whole-mask-inside.xml
rename to data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-inside.xml
index 9c923a7..2da1264 100644
--- a/data/0.6.2/images/sbem-6dpf-1-whole-mask-inside.xml
+++ b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-inside.xml
@@ -2,7 +2,7 @@
<BasePath type="relative">.</BasePath>
<SequenceDescription>
<ImageLoader format="bdv.hdf5">
- <hdf5 type="relative">../../rawdata/sbem-6dpf-1-whole-mask-inside.h5</hdf5>
+ <hdf5 type="relative">../../../rawdata/sbem-6dpf-1-whole-segmented-inside.h5</hdf5>
</ImageLoader>
<ViewSetups>
<Attributes name="channel">
diff --git a/data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-muscle.xml b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-muscle.xml
similarity index 91%
rename from data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-muscle.xml
rename to data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-muscle.xml
index 26ba713..e70beed 100644
--- a/data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-muscle.xml
+++ b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-muscle.xml
@@ -2,7 +2,7 @@
<BasePath type="relative">.</BasePath>
<SequenceDescription>
<ImageLoader format="bdv.hdf5">
- <hdf5 type="relative">../../rawdata/sbem-6dpf-1-whole-segmented-muscle.h5</hdf5>
+ <hdf5 type="relative">../../../rawdata/sbem-6dpf-1-whole-segmented-muscle.h5</hdf5>
</ImageLoader>
<ViewSetups>
<ViewSetup>
diff --git a/data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-ariande-neuropil.xml b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-neuropil.xml
similarity index 91%
rename from data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-ariande-neuropil.xml
rename to data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-neuropil.xml
index 2b06347..ed6d3cf 100644
--- a/data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-ariande-neuropil.xml
+++ b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-neuropil.xml
@@ -2,7 +2,7 @@
<BasePath type="relative">.</BasePath>
<SequenceDescription>
<ImageLoader format="bdv.hdf5">
- <hdf5 type="relative">../../rawdata/sbem-6dpf-1-whole-segmented-ariande-neuropil.h5</hdf5>
+ <hdf5 type="relative">../../../rawdata/sbem-6dpf-1-whole-segmented-neuropil.h5</hdf5>
</ImageLoader>
<ViewSetups>
<ViewSetup>
diff --git a/data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-nuclei-labels.xml b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-nuclei.xml
similarity index 90%
rename from data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-nuclei-labels.xml
rename to data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-nuclei.xml
index f818c38..1f61d26 100644
--- a/data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-nuclei-labels.xml
+++ b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-nuclei.xml
@@ -2,7 +2,7 @@
<BasePath type="relative">.</BasePath>
<SequenceDescription>
<ImageLoader format="bdv.hdf5">
- <hdf5 type="relative">../../0.0.0/segmentations/sbem-6dpf-1-whole-segmented-nuclei-labels.h5</hdf5>
+ <hdf5 type="relative">../../../0.0.0/images/local/sbem-6dpf-1-whole-segmented-nuclei.h5</hdf5>
</ImageLoader>
<ViewSetups>
<Attributes name="channel">
diff --git a/data/0.6.2/images/sbem-6dpf-1-whole-mask-outside.xml b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-outside.xml
similarity index 91%
rename from data/0.6.2/images/sbem-6dpf-1-whole-mask-outside.xml
rename to data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-outside.xml
index 5f3be7f..c0a4209 100644
--- a/data/0.6.2/images/sbem-6dpf-1-whole-mask-outside.xml
+++ b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-outside.xml
@@ -2,7 +2,7 @@
<BasePath type="relative">.</BasePath>
<SequenceDescription>
<ImageLoader format="bdv.hdf5">
- <hdf5 type="relative">../../rawdata/sbem-6dpf-1-whole-mask-outside.h5</hdf5>
+ <hdf5 type="relative">../../../rawdata/sbem-6dpf-1-whole-segmented-outside.h5</hdf5>
</ImageLoader>
<ViewSetups>
<Attributes name="channel">
diff --git a/data/0.6.2/images/sbem-6dpf-1-whole-mask-resin.xml b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-resin.xml
similarity index 91%
rename from data/0.6.2/images/sbem-6dpf-1-whole-mask-resin.xml
rename to data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-resin.xml
index f71df8d..098e39d 100644
--- a/data/0.6.2/images/sbem-6dpf-1-whole-mask-resin.xml
+++ b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-resin.xml
@@ -2,7 +2,7 @@
<BasePath type="relative">.</BasePath>
<SequenceDescription>
<ImageLoader format="bdv.hdf5">
- <hdf5 type="relative">../../rawdata/sbem-6dpf-1-whole-mask-resin.h5</hdf5>
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</ImageLoader>
<ViewSetups>
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diff --git a/data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-tissue-labels.xml b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-tissue.xml
similarity index 91%
rename from data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-tissue-labels.xml
rename to data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-tissue.xml
index 390dbdb..767f2a6 100644
--- a/data/0.6.2/segmentations/sbem-6dpf-1-whole-segmented-tissue-labels.xml
+++ b/data/0.6.2/images/local/sbem-6dpf-1-whole-segmented-tissue.xml
@@ -2,7 +2,7 @@
<BasePath type="relative">.</BasePath>
<SequenceDescription>
<ImageLoader format="bdv.hdf5">
- <hdf5 type="relative">../../rawdata/sbem-6dpf-1-whole-segmented-tissue-labels.h5</hdf5>
+ <hdf5 type="relative">../../../rawdata/sbem-6dpf-1-whole-segmented-tissue.h5</hdf5>
</ImageLoader>
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diff --git a/data/0.6.2/images/prospr-6dpf-1-whole-ASCb-MED.xml b/data/0.6.2/images/prospr-6dpf-1-whole-ASCb-MED.xml
deleted file mode 100644
index d14d3dc..0000000
--- a/data/0.6.2/images/prospr-6dpf-1-whole-ASCb-MED.xml
+++ /dev/null
@@ -1,39 +0,0 @@
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diff --git a/data/0.6.2/images/prospr-6dpf-1-whole-AllCR1-MED.xml b/data/0.6.2/images/prospr-6dpf-1-whole-AllCR1-MED.xml
deleted file mode 100644
index 9dc2d95..0000000
--- a/data/0.6.2/images/prospr-6dpf-1-whole-AllCR1-MED.xml
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deleted file mode 100644
index de9ea6b..0000000
--- a/data/0.6.2/images/prospr-6dpf-1-whole-AllCR2-MED.xml
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@@ -1,39 +0,0 @@
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diff --git a/data/0.6.2/images/prospr-6dpf-1-whole-Arx-MED.xml b/data/0.6.2/images/prospr-6dpf-1-whole-Arx-MED.xml
deleted file mode 100644
index 1d2c2ff..0000000
--- a/data/0.6.2/images/prospr-6dpf-1-whole-Arx-MED.xml
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@@ -1,39 +0,0 @@
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deleted file mode 100644
index 750f585..0000000
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deleted file mode 100644
index d742fdc..0000000
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deleted file mode 100644
index 5702f9f..0000000
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deleted file mode 100644
index 8e10e1b..0000000
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deleted file mode 100644
index 56e5bdb..0000000
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deleted file mode 100644
index eac7a1f..0000000
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deleted file mode 100644
index 89b6b44..0000000
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deleted file mode 100644
index cbc2161..0000000
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diff --git a/data/0.6.2/misc/bdv_server.txt b/data/0.6.2/misc/bdv_server.txt
deleted file mode 100644
index bdf3047..0000000
--- a/data/0.6.2/misc/bdv_server.txt
+++ /dev/null
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-prospr-6dpf-1-whole-segmented-PNS ../images/prospr-6dpf-1-whole-segmented-PNS.xml
-prospr-6dpf-1-whole-segmented-RestOfAnimal ../images/prospr-6dpf-1-whole-segmented-RestOfAnimal.xml
-prospr-6dpf-1-whole-segmented-Stomodeum ../images/prospr-6dpf-1-whole-segmented-Stomodeum.xml
-prospr-6dpf-1-whole-segmented-VNC ../images/prospr-6dpf-1-whole-segmented-VNC.xml
-prospr-6dpf-1-whole-segmented-ProSPr6-Ref ../images/prospr-6dpf-1-whole-segmented-ProSPr6-Ref.xml
-sbem-6dpf-1-whole-mask-extrapolated ../images/sbem-6dpf-1-whole-mask-extrapolated.xml
-sbem-6dpf-1-whole-segmented-chromatin-labels ../segmentations/sbem-6dpf-1-whole-segmented-chromatin-labels.xml
-sbem-6dpf-1-whole-segmented-tissue-labels ../segmentations/sbem-6dpf-1-whole-segmented-tissue-labels.xml
-sbem-6dpf-1-whole-segmented-muscle ../segmentations/sbem-6dpf-1-whole-segmented-muscle.xml
-sbem-6dpf-1-whole-segmented-cells-labels ../segmentations/sbem-6dpf-1-whole-segmented-cells-labels.xml
-sbem-6dpf-1-whole-segmented-nuclei-labels ../segmentations/sbem-6dpf-1-whole-segmented-nuclei-labels.xml
-sbem-6dpf-1-whole-segmented-cilia-labels ../segmentations/sbem-6dpf-1-whole-segmented-cilia-labels.xml
-sbem-6dpf-1-whole-segmented-ariande-neuropil ../segmentations/sbem-6dpf-1-whole-segmented-ariande-neuropil.xml
-sbem-6dpf-1-whole-segmented-cats-neuropil ../segmentations/sbem-6dpf-1-whole-segmented-cats-neuropil.xml
-prospr-6dpf-1-whole-virtual-cells-labels ../segmentations/prospr-6dpf-1-whole-virtual-cells-labels.xml
diff --git a/data/0.6.2/misc/dynamic_segmentations.json b/data/0.6.2/misc/dynamic_segmentations.json
new file mode 100644
index 0000000..bea02b5
--- /dev/null
+++ b/data/0.6.2/misc/dynamic_segmentations.json
@@ -0,0 +1,29 @@
+{
+ "sbem-6dpf-1-whole-segmented-cells": {
+ "PainteraProject:": [
+ "/g/kreshuk/data/arendt/platyneris_v1/data.n5",
+ "volumes/paintera/proofread_cells"
+ ],
+ "Postprocess": {
+ "BoundaryKey": "volumes/affinities/s1",
+ "BoundaryPath": "/g/kreshuk/data/arendt/platyneris_v1/data.n5",
+ "LabelSegmentation": false,
+ "MaxSegmentNumber": 32700
+ },
+ "TableUpdateFunction": "make_cell_tables"
+ },
+ "sbem-6dpf-1-whole-segmented-cilia": {
+ "PainteraProject:": [
+ "/g/kreshuk/data/arendt/platyneris_v1/data.n5",
+ "volumes/paintera/proofread_cilia"
+ ],
+ "TableUpdateFunction": "make_cilia_tables"
+ },
+ "sbem-6dpf-1-whole-segmented-nuclei": {
+ "PainteraProject:": [
+ "/g/kreshuk/data/arendt/platyneris_v1/data.n5",
+ "volumes/paintera/nuclei"
+ ],
+ "TableUpdateFunction": "make_nuclei_tables"
+ }
+}
\ No newline at end of file
diff --git a/data/0.6.2/segmentations/prospr-6dpf-1-whole-virtual-cells-labels.xml b/data/0.6.2/segmentations/prospr-6dpf-1-whole-virtual-cells-labels.xml
deleted file mode 100644
index 07b8e7c..0000000
--- a/data/0.6.2/segmentations/prospr-6dpf-1-whole-virtual-cells-labels.xml
+++ /dev/null
@@ -1,39 +0,0 @@
-<SpimData version="0.2">
- <BasePath type="relative">.</BasePath>
- <SequenceDescription>
- <ImageLoader format="bdv.hdf5">
- <hdf5 type="relative">../../0.6.0/segmentations/prospr-6dpf-1-whole-virtual-cells-labels.h5</hdf5>
- </ImageLoader>
- <ViewSetups>
- <Attributes name="channel">
- <Channel>
- <id>0</id>
- <name>0</name>
- </Channel>
- </Attributes>
- <ViewSetup>
- <id>0</id>
- <name>Setup0</name>
- <size>500 471 519</size>
- <voxelSize>
- <unit>micrometer</unit>
- <size>0.55 0.55 0.55</size>
- </voxelSize>
- <attributes>
- <channel>0</channel>
- </attributes>
- </ViewSetup>
- </ViewSetups>
- <Timepoints type="range">
- <first>0</first>
- <last>0</last>
- </Timepoints>
- </SequenceDescription>
- <ViewRegistrations>
- <ViewRegistration setup="0" timepoint="0">
- <ViewTransform type="affine">
- <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine>
- </ViewTransform>
- </ViewRegistration>
- </ViewRegistrations>
-</SpimData>
diff --git a/data/0.6.2/tables/prospr-6dpf-1-whole-virtual-cells-labels/default.csv b/data/0.6.2/tables/prospr-6dpf-1-whole-virtual-cells-labels/default.csv
deleted file mode 120000
index 0ce8e10..0000000
--- a/data/0.6.2/tables/prospr-6dpf-1-whole-virtual-cells-labels/default.csv
+++ /dev/null
@@ -1 +0,0 @@
-../../../0.6.1/tables/prospr-6dpf-1-whole-virtual-cells-labels/default.csv
\ No newline at end of file
diff --git a/data/0.6.2/tables/prospr-6dpf-1-whole-virtual-cells-labels/profile_clust_curated.csv b/data/0.6.2/tables/prospr-6dpf-1-whole-virtual-cells-labels/profile_clust_curated.csv
deleted file mode 120000
index 838deac..0000000
--- a/data/0.6.2/tables/prospr-6dpf-1-whole-virtual-cells-labels/profile_clust_curated.csv
+++ /dev/null
@@ -1 +0,0 @@
-../../../0.6.1/tables/prospr-6dpf-1-whole-virtual-cells-labels/profile_clust_curated.csv
\ No newline at end of file
diff --git a/data/0.6.2/tables/prospr-6dpf-1-whole-virtual-cells-labels/additional_tables.txt b/data/0.6.2/tables/prospr-6dpf-1-whole-virtual-cells/additional_tables.txt
similarity index 100%
rename from data/0.6.2/tables/prospr-6dpf-1-whole-virtual-cells-labels/additional_tables.txt
rename to data/0.6.2/tables/prospr-6dpf-1-whole-virtual-cells/additional_tables.txt
diff --git a/data/0.6.2/tables/prospr-6dpf-1-whole-virtual-cells/default.csv b/data/0.6.2/tables/prospr-6dpf-1-whole-virtual-cells/default.csv
new file mode 120000
index 0000000..f29780c
--- /dev/null
+++ b/data/0.6.2/tables/prospr-6dpf-1-whole-virtual-cells/default.csv
@@ -0,0 +1 @@
+../../../0.6.1/tables/prospr-6dpf-1-whole-virtual-cells/default.csv
\ No newline at end of file
diff --git a/data/0.6.2/tables/prospr-6dpf-1-whole-virtual-cells/profile_clust_curated.csv b/data/0.6.2/tables/prospr-6dpf-1-whole-virtual-cells/profile_clust_curated.csv
new file mode 120000
index 0000000..47f6e71
--- /dev/null
+++ b/data/0.6.2/tables/prospr-6dpf-1-whole-virtual-cells/profile_clust_curated.csv
@@ -0,0 +1 @@
+../../../0.6.1/tables/prospr-6dpf-1-whole-virtual-cells/profile_clust_curated.csv
\ No newline at end of file
diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/cells_to_nuclei.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/cells_to_nuclei.csv
deleted file mode 120000
index e4d242f..0000000
--- a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/cells_to_nuclei.csv
+++ /dev/null
@@ -1 +0,0 @@
-../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-cells-labels/cells_to_nuclei.csv
\ No newline at end of file
diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/default.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/default.csv
deleted file mode 120000
index 003c71d..0000000
--- a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/default.csv
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-../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-cells-labels/default.csv
\ No newline at end of file
diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/extrapolated_intensity_correction.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/extrapolated_intensity_correction.csv
deleted file mode 120000
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-../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-cells-labels/extrapolated_intensity_correction.csv
\ No newline at end of file
diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/genes.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/genes.csv
deleted file mode 120000
index bce3cfb..0000000
--- a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/genes.csv
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-../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-cells-labels/genes.csv
\ No newline at end of file
diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/morphology.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/morphology.csv
deleted file mode 120000
index f7c6cc3..0000000
--- a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/morphology.csv
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-../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-cells-labels/morphology.csv
\ No newline at end of file
diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/regions.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/regions.csv
deleted file mode 120000
index dcc9316..0000000
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-../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-cells-labels/regions.csv
\ No newline at end of file
diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/vc_assignments.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/vc_assignments.csv
deleted file mode 120000
index 1bd3de7..0000000
--- a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/vc_assignments.csv
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-../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-cells-labels/vc_assignments.csv
\ No newline at end of file
diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/additional_tables.txt b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/additional_tables.txt
similarity index 100%
rename from data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells-labels/additional_tables.txt
rename to data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/additional_tables.txt
diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/cells_to_nuclei.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/cells_to_nuclei.csv
new file mode 120000
index 0000000..7ad93e4
--- /dev/null
+++ b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/cells_to_nuclei.csv
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+../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-cells/cells_to_nuclei.csv
\ No newline at end of file
diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/default.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/default.csv
new file mode 120000
index 0000000..c835c1a
--- /dev/null
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+../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-cells/default.csv
\ No newline at end of file
diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/extrapolated_intensity_correction.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/extrapolated_intensity_correction.csv
new file mode 120000
index 0000000..853949a
--- /dev/null
+++ b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/extrapolated_intensity_correction.csv
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+../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-cells/extrapolated_intensity_correction.csv
\ No newline at end of file
diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/genes.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/genes.csv
new file mode 120000
index 0000000..0841262
--- /dev/null
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+../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-cells/genes.csv
\ No newline at end of file
diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/morphology.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/morphology.csv
new file mode 120000
index 0000000..da4da1e
--- /dev/null
+++ b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/morphology.csv
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+../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-cells/morphology.csv
\ No newline at end of file
diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/regions.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/regions.csv
new file mode 120000
index 0000000..7dac8cd
--- /dev/null
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+../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-cells/regions.csv
\ No newline at end of file
diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/vc_assignments.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/vc_assignments.csv
new file mode 120000
index 0000000..143149a
--- /dev/null
+++ b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cells/vc_assignments.csv
@@ -0,0 +1 @@
+../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-cells/vc_assignments.csv
\ No newline at end of file
diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-chromatin-labels/default.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-chromatin-labels/default.csv
deleted file mode 120000
index ca2cf1d..0000000
--- a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-chromatin-labels/default.csv
+++ /dev/null
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-../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-chromatin-labels/default.csv
\ No newline at end of file
diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-chromatin/default.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-chromatin/default.csv
new file mode 120000
index 0000000..25b50f7
--- /dev/null
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@@ -0,0 +1 @@
+../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-chromatin/default.csv
\ No newline at end of file
diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cilia-labels/additional_tables.txt b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cilia/additional_tables.txt
similarity index 100%
rename from data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cilia-labels/additional_tables.txt
rename to data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cilia/additional_tables.txt
diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cilia-labels/cell_mapping.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cilia/cell_mapping.csv
similarity index 100%
rename from data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cilia-labels/cell_mapping.csv
rename to data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cilia/cell_mapping.csv
diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cilia-labels/default.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cilia/default.csv
similarity index 100%
rename from data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cilia-labels/default.csv
rename to data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cilia/default.csv
diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cilia-labels/morphology.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cilia/morphology.csv
similarity index 100%
rename from data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cilia-labels/morphology.csv
rename to data/0.6.2/tables/sbem-6dpf-1-whole-segmented-cilia/morphology.csv
diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/default.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/default.csv
deleted file mode 120000
index dfb7b53..0000000
--- a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/default.csv
+++ /dev/null
@@ -1 +0,0 @@
-../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/default.csv
\ No newline at end of file
diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/extrapolated_intensity_correction.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/extrapolated_intensity_correction.csv
deleted file mode 120000
index 23c8c29..0000000
--- a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/extrapolated_intensity_correction.csv
+++ /dev/null
@@ -1 +0,0 @@
-../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/extrapolated_intensity_correction.csv
\ No newline at end of file
diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/morphology.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/morphology.csv
deleted file mode 120000
index 5fea808..0000000
--- a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/morphology.csv
+++ /dev/null
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-../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/morphology.csv
\ No newline at end of file
diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/additional_tables.txt b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei/additional_tables.txt
similarity index 100%
rename from data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei-labels/additional_tables.txt
rename to data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei/additional_tables.txt
diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei/default.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei/default.csv
new file mode 120000
index 0000000..7ac67c2
--- /dev/null
+++ b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei/default.csv
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+../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-nuclei/default.csv
\ No newline at end of file
diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei/extrapolated_intensity_correction.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei/extrapolated_intensity_correction.csv
new file mode 120000
index 0000000..b854c73
--- /dev/null
+++ b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei/extrapolated_intensity_correction.csv
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+../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-nuclei/extrapolated_intensity_correction.csv
\ No newline at end of file
diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei/morphology.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei/morphology.csv
new file mode 120000
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--- /dev/null
+++ b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-nuclei/morphology.csv
@@ -0,0 +1 @@
+../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-nuclei/morphology.csv
\ No newline at end of file
diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-tissue-labels/default.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-tissue-labels/default.csv
deleted file mode 120000
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--- a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-tissue-labels/default.csv
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-../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-tissue-labels/default.csv
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diff --git a/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-tissue/default.csv b/data/0.6.2/tables/sbem-6dpf-1-whole-segmented-tissue/default.csv
new file mode 120000
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--- /dev/null
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@@ -0,0 +1 @@
+../../../0.6.1/tables/sbem-6dpf-1-whole-segmented-tissue/default.csv
\ No newline at end of file
--
GitLab