diff --git a/data/0.6.5/segmentations/sbem-6dpf-1-whole-segmented-nephridia.xml b/data/0.6.5/segmentations/sbem-6dpf-1-whole-segmented-nephridia.xml index bd3ca0564a2cb62de735ab7a6936ba475c68bc7c..ba8625a976297d3d1d7ec247451b6804d0ac3411 100644 --- a/data/0.6.5/segmentations/sbem-6dpf-1-whole-segmented-nephridia.xml +++ b/data/0.6.5/segmentations/sbem-6dpf-1-whole-segmented-nephridia.xml @@ -2,7 +2,7 @@ <BasePath type="relative">.</BasePath> <SequenceDescription> <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">sbem-6dpf-1-whole-segmented-nephridia.h5</hdf5> + <hdf5 type="relative">../../sbem-6dpf-1-whole-segmented-nephridia.h5</hdf5> </ImageLoader> <ViewSetups> <Attributes name="channel"> diff --git a/data/rawdata/sbem-6dpf-1-whole-segmented-nephridia.xml b/data/rawdata/sbem-6dpf-1-whole-segmented-nephridia.xml new file mode 100644 index 0000000000000000000000000000000000000000..bd3ca0564a2cb62de735ab7a6936ba475c68bc7c --- /dev/null +++ b/data/rawdata/sbem-6dpf-1-whole-segmented-nephridia.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">sbem-6dpf-1-whole-segmented-nephridia.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>860 810 714</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.32 0.32 0.4</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.32 0.0 0.0 0.0 0.0 0.32 0.0 0.0 0.0 0.0 0.4 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData>