From e69bb9d499a61d0ca7e8ebd3eef35f17a116137a Mon Sep 17 00:00:00 2001 From: Constantin Pape <constantin.pape@iwr.uni-heidelberg.de> Date: Thu, 6 Feb 2020 19:46:57 +0100 Subject: [PATCH] Migrate 0.6.5 --- data/0.6.5/images/images.json | 1762 +++++++++++++++++ .../images/local/prospr-6dpf-1-whole-ache.xml | 39 + .../local/prospr-6dpf-1-whole-allcr1.xml | 39 + .../local/prospr-6dpf-1-whole-allcr2.xml | 39 + .../local/prospr-6dpf-1-whole-anpra.xml | 39 + .../local/prospr-6dpf-1-whole-anprb.xml | 39 + .../prospr-6dpf-1-whole-ap2.xml} | 2 +- .../prospr-6dpf-1-whole-arx.xml} | 2 +- .../images/local/prospr-6dpf-1-whole-ascb.xml | 39 + .../images/local/prospr-6dpf-1-whole-asci.xml | 39 + .../local/prospr-6dpf-1-whole-ascii.xml | 39 + .../images/local/prospr-6dpf-1-whole-ash.xml | 39 + .../local/prospr-6dpf-1-whole-asicalpha.xml | 39 + .../images/local/prospr-6dpf-1-whole-ato2.xml | 39 + .../local/prospr-6dpf-1-whole-baiap.xml | 39 + .../local/prospr-6dpf-1-whole-barh1.xml | 39 + 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.../images/local/prospr-6dpf-1-whole-olig.xml | 39 + .../local/prospr-6dpf-1-whole-olm2a.xml | 39 + .../images/local/prospr-6dpf-1-whole-otp.xml | 39 + .../images/local/prospr-6dpf-1-whole-p56.xml | 39 + .../local/prospr-6dpf-1-whole-paraxis.xml | 39 + .../local/prospr-6dpf-1-whole-patched.xml | 39 + .../local/prospr-6dpf-1-whole-pax258.xml | 39 + .../images/local/prospr-6dpf-1-whole-pax6.xml | 39 + .../local/prospr-6dpf-1-whole-pcdh15.xml | 39 + .../images/local/prospr-6dpf-1-whole-pde9.xml | 39 + .../images/local/prospr-6dpf-1-whole-pdf.xml | 39 + .../images/local/prospr-6dpf-1-whole-pea3.xml | 39 + .../images/local/prospr-6dpf-1-whole-pgam.xml | 39 + .../images/local/prospr-6dpf-1-whole-phc2.xml | 39 + .../local/prospr-6dpf-1-whole-phox2b.xml | 39 + .../local/prospr-6dpf-1-whole-pikachu.xml | 39 + .../local/prospr-6dpf-1-whole-pitxb.xml | 39 + .../images/local/prospr-6dpf-1-whole-pkd1.xml | 39 + .../images/local/prospr-6dpf-1-whole-pkd2.xml | 39 + .../images/local/prospr-6dpf-1-whole-plcg.xml | 39 + .../images/local/prospr-6dpf-1-whole-ppib.xml | 39 + .../local/prospr-6dpf-1-whole-prdm8.xml | 39 + .../images/local/prospr-6dpf-1-whole-prox.xml | 39 + .../local/prospr-6dpf-1-whole-psmf1.xml | 39 + .../images/local/prospr-6dpf-1-whole-ptf1.xml | 39 + .../images/local/prospr-6dpf-1-whole-rab3.xml | 39 + .../images/local/prospr-6dpf-1-whole-rims.xml | 39 + .../images/local/prospr-6dpf-1-whole-robo.xml | 39 + .../images/local/prospr-6dpf-1-whole-rpc2.xml | 39 + .../prospr-6dpf-1-whole-rx.xml} | 2 +- .../images/local/prospr-6dpf-1-whole-ryr2.xml | 39 + .../local/prospr-6dpf-1-whole-scn8aa.xml | 39 + ...rospr-6dpf-1-whole-segmented-allglands.xml | 39 + ...-6dpf-1-whole-segmented-crypticsegment.xml | 39 + .../prospr-6dpf-1-whole-segmented-foregut.xml | 39 + .../prospr-6dpf-1-whole-segmented-glands.xml | 39 + .../prospr-6dpf-1-whole-segmented-head.xml | 39 + ...6dpf-1-whole-segmented-lateralectoderm.xml | 39 + ...spr-6dpf-1-whole-segmented-prospr6-ref.xml | 39 + ...prospr-6dpf-1-whole-segmented-pygidium.xml | 39 + ...pr-6dpf-1-whole-segmented-restofanimal.xml | 39 + .../prospr-6dpf-1-whole-segmented-vnc.xml | 39 + .../local/prospr-6dpf-1-whole-sema2.xml | 39 + .../images/local/prospr-6dpf-1-whole-sert.xml | 39 + .../images/local/prospr-6dpf-1-whole-sim1.xml | 39 + .../local/prospr-6dpf-1-whole-six12.xml | 39 + .../images/local/prospr-6dpf-1-whole-six4.xml | 39 + .../images/local/prospr-6dpf-1-whole-slit.xml | 39 + .../images/local/prospr-6dpf-1-whole-snd1.xml | 39 + .../images/local/prospr-6dpf-1-whole-sox2.xml | 39 + .../images/local/prospr-6dpf-1-whole-sox4.xml | 39 + .../local/prospr-6dpf-1-whole-soxb12.xml | 39 + .../local/prospr-6dpf-1-whole-soxb2.xml | 39 + .../images/local/prospr-6dpf-1-whole-sp8.xml | 39 + .../local/prospr-6dpf-1-whole-stathmin.xml | 39 + .../prospr-6dpf-1-whole-synaptopodin.xml | 39 + .../images/local/prospr-6dpf-1-whole-syt.xml | 39 + .../local/prospr-6dpf-1-whole-syt12.xml | 39 + .../images/local/prospr-6dpf-1-whole-syt7.xml | 39 + .../images/local/prospr-6dpf-1-whole-syta.xml | 39 + .../images/local/prospr-6dpf-1-whole-tal.xml | 39 + .../images/local/prospr-6dpf-1-whole-tbh.xml | 39 + .../local/prospr-6dpf-1-whole-tbx20.xml | 39 + .../prospr-6dpf-1-whole-th.xml} | 2 +- .../images/local/prospr-6dpf-1-whole-timp.xml | 39 + .../images/local/prospr-6dpf-1-whole-tlx.xml | 39 + .../local/prospr-6dpf-1-whole-tmtc3.xml | 39 + .../images/local/prospr-6dpf-1-whole-trk.xml | 39 + .../images/local/prospr-6dpf-1-whole-trph.xml | 39 + .../images/local/prospr-6dpf-1-whole-trpv.xml | 39 + .../local/prospr-6dpf-1-whole-trpv4.xml | 39 + .../local/prospr-6dpf-1-whole-trpv5.xml | 39 + .../local/prospr-6dpf-1-whole-twist.xml | 39 + .../local/prospr-6dpf-1-whole-unc22.xml | 39 + .../images/local/prospr-6dpf-1-whole-uncs.xml | 39 + .../images/local/prospr-6dpf-1-whole-uncx.xml | 39 + .../images/local/prospr-6dpf-1-whole-upp.xml | 39 + .../local/prospr-6dpf-1-whole-usp9x.xml | 39 + .../local/prospr-6dpf-1-whole-vacht.xml | 39 + .../local/prospr-6dpf-1-whole-vat1l.xml | 39 + .../local/prospr-6dpf-1-whole-vegfr.xml | 39 + .../local/prospr-6dpf-1-whole-vglut.xml | 39 + .../prospr-6dpf-1-whole-virtual-cells.xml | 39 + .../local/prospr-6dpf-1-whole-wnt16.xml | 39 + .../images/local/prospr-6dpf-1-whole-wnt5.xml | 39 + .../{ => local}/sbem-6dpf-1-whole-raw.xml | 2 +- .../sbem-6dpf-1-whole-segmented-cells.xml} | 2 +- ...sbem-6dpf-1-whole-segmented-chromatin.xml} | 2 +- .../sbem-6dpf-1-whole-segmented-cilia.xml} | 2 +- ...m-6dpf-1-whole-segmented-extrapolated.xml} | 2 +- .../sbem-6dpf-1-whole-segmented-ganglia.xml} | 2 +- .../sbem-6dpf-1-whole-segmented-inside.xml} | 2 +- .../sbem-6dpf-1-whole-segmented-midgut.xml | 2 +- .../sbem-6dpf-1-whole-segmented-muscle.xml | 2 +- .../sbem-6dpf-1-whole-segmented-nephridia.xml | 2 +- .../sbem-6dpf-1-whole-segmented-neuropil.xml} | 2 +- .../sbem-6dpf-1-whole-segmented-nuclei.xml} | 2 +- .../sbem-6dpf-1-whole-segmented-outside.xml} | 2 +- .../sbem-6dpf-1-whole-segmented-resin.xml} | 2 +- .../sbem-6dpf-1-whole-segmented-tissue.xml} | 2 +- .../images/prospr-6dpf-1-whole-ASCb-MED.xml | 39 - .../images/prospr-6dpf-1-whole-AllCR1-MED.xml | 39 - .../images/prospr-6dpf-1-whole-AllCR2-MED.xml | 39 - .../images/prospr-6dpf-1-whole-Arx-MED.xml | 39 - .../images/prospr-6dpf-1-whole-Ash-MED.xml | 39 - .../images/prospr-6dpf-1-whole-BAIAP-MED.xml | 39 - .../images/prospr-6dpf-1-whole-BarH1-MED.xml | 39 - .../images/prospr-6dpf-1-whole-Beta3-MED.xml | 39 - .../images/prospr-6dpf-1-whole-Bmpr1-MED.xml | 39 - .../images/prospr-6dpf-1-whole-Brn124-MED.xml | 39 - .../images/prospr-6dpf-1-whole-Brn3a-MED.xml | 39 - .../images/prospr-6dpf-1-whole-COE-MED.xml | 39 - .../images/prospr-6dpf-1-whole-Cal2-MED.xml | 39 - .../prospr-6dpf-1-whole-Calmodulin-MED.xml | 39 - .../images/prospr-6dpf-1-whole-ChAT-MED.xml | 39 - .../images/prospr-6dpf-1-whole-Chx10-MED.xml | 39 - .../images/prospr-6dpf-1-whole-Dach-MED.xml | 39 - .../prospr-6dpf-1-whole-DbhLike-MED.xml | 39 - .../prospr-6dpf-1-whole-DopaRD2-MED.xml | 39 - .../prospr-6dpf-1-whole-ENR1-PGAM-MED.xml | 39 - .../prospr-6dpf-1-whole-ENR10-UPP-MED.xml | 39 - .../prospr-6dpf-1-whole-ENR12-UNC22-MED.xml | 39 - .../prospr-6dpf-1-whole-ENR13-NDUS1-MED.xml | 39 - .../prospr-6dpf-1-whole-ENR16-ODO2-MED.xml | 39 - ...prospr-6dpf-1-whole-ENR19-FboxLike-MED.xml | 39 - .../prospr-6dpf-1-whole-ENR2-RYR2-MED.xml | 39 - .../prospr-6dpf-1-whole-ENR20-PPIB-MED.xml | 39 - .../prospr-6dpf-1-whole-ENR22-CO1A1-MED.xml | 39 - ...pr-6dpf-1-whole-ENR25-Synaptopodin-MED.xml | 39 - .../prospr-6dpf-1-whole-ENR29-USP9X-MED.xml | 39 - .../prospr-6dpf-1-whole-ENR3-JKIP3-MED.xml | 39 - .../prospr-6dpf-1-whole-ENR30-CCG5-MED.xml | 39 - ...spr-6dpf-1-whole-ENR31-Leucin-rich-MED.xml | 39 - .../prospr-6dpf-1-whole-ENR32-GRIK3-MED.xml | 39 - .../prospr-6dpf-1-whole-ENR34-MTHFSD-MED.xml | 39 - .../prospr-6dpf-1-whole-ENR39-RPC2-MED.xml | 39 - .../prospr-6dpf-1-whole-ENR4-SND1-MED.xml | 39 - ...spr-6dpf-1-whole-ENR46-Calexcitin2-MED.xml | 39 - ...ospr-6dpf-1-whole-ENR54-Boule-like-MED.xml | 39 - ...r-6dpf-1-whole-ENR57-Junctophilin1-MED.xml | 39 - ...prospr-6dpf-1-whole-ENR6-Nucleolin-MED.xml | 39 - .../prospr-6dpf-1-whole-ENR62-NB5R3-MED.xml | 39 - .../prospr-6dpf-1-whole-ENR64-PSMF1-MED.xml | 39 - .../prospr-6dpf-1-whole-ENR69-BCA1-MED.xml | 39 - .../prospr-6dpf-1-whole-ENR71-Patched-MED.xml | 39 - ...r-6dpf-1-whole-ENR8-Non-muscle-MHC-MED.xml | 39 - .../prospr-6dpf-1-whole-ENR9-NOE1-MED.xml | 39 - .../prospr-6dpf-1-whole-Edu42to48-MED.xml | 39 - .../images/prospr-6dpf-1-whole-ElaV-MED.xml | 39 - .../images/prospr-6dpf-1-whole-FOR-MED.xml | 39 - .../images/prospr-6dpf-1-whole-FVRI-MED.xml | 39 - .../images/prospr-6dpf-1-whole-FoxD3-MED.xml | 39 - .../images/prospr-6dpf-1-whole-FoxN4-MED.xml | 39 - .../images/prospr-6dpf-1-whole-GAD-MED.xml | 39 - .../images/prospr-6dpf-1-whole-GCB-MED.xml | 39 - 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<affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-allcr2.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-allcr2.xml new file mode 100644 index 0000000..dd5d380 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-allcr2.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-allcr2.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-anpra.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-anpra.xml new file mode 100644 index 0000000..069b2b6 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-anpra.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-anpra.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-anprb.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-anprb.xml new file mode 100644 index 0000000..19bfc1c --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-anprb.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-anprb.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/prospr-6dpf-1-whole-ANPRB-MED.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-ap2.xml similarity index 91% rename from data/0.6.5/images/prospr-6dpf-1-whole-ANPRB-MED.xml rename to data/0.6.5/images/local/prospr-6dpf-1-whole-ap2.xml index 7ff46c4..1a40fbc 100644 --- a/data/0.6.5/images/prospr-6dpf-1-whole-ANPRB-MED.xml +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-ap2.xml @@ -2,7 +2,7 @@ <BasePath type="relative">.</BasePath> <SequenceDescription> <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.6.3/images/prospr-6dpf-1-whole-ANPRB-MED.h5</hdf5> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-ap2.h5</hdf5> </ImageLoader> <ViewSetups> <Attributes name="channel"> diff --git a/data/0.6.5/images/prospr-6dpf-1-whole-AP2-MED.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-arx.xml similarity index 91% rename from data/0.6.5/images/prospr-6dpf-1-whole-AP2-MED.xml rename to data/0.6.5/images/local/prospr-6dpf-1-whole-arx.xml index bb1d5ca..e2f5976 100644 --- a/data/0.6.5/images/prospr-6dpf-1-whole-AP2-MED.xml +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-arx.xml @@ -2,7 +2,7 @@ <BasePath type="relative">.</BasePath> <SequenceDescription> <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.6.3/images/prospr-6dpf-1-whole-AP2-MED.h5</hdf5> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-arx.h5</hdf5> </ImageLoader> <ViewSetups> <Attributes name="channel"> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-ascb.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-ascb.xml new file mode 100644 index 0000000..bb5b002 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-ascb.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-ascb.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-asci.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-asci.xml new file mode 100644 index 0000000..cf3c275 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-asci.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-asci.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-ascii.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-ascii.xml new file mode 100644 index 0000000..178aa60 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-ascii.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-ascii.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-ash.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-ash.xml new file mode 100644 index 0000000..a3cfe55 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-ash.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-ash.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-asicalpha.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-asicalpha.xml new file mode 100644 index 0000000..caf1725 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-asicalpha.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-asicalpha.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-ato2.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-ato2.xml new file mode 100644 index 0000000..0b925aa --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-ato2.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-ato2.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-baiap.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-baiap.xml new file mode 100644 index 0000000..6c7e4bb --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-baiap.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-baiap.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-barh1.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-barh1.xml new file mode 100644 index 0000000..cd4fbe4 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-barh1.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-barh1.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-bca1.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-bca1.xml new file mode 100644 index 0000000..c832f2f --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-bca1.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-bca1.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-beta3.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-beta3.xml new file mode 100644 index 0000000..2590db3 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-beta3.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-beta3.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-bmpr1.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-bmpr1.xml new file mode 100644 index 0000000..f698421 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-bmpr1.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-bmpr1.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-boule-like.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-boule-like.xml new file mode 100644 index 0000000..ed51d0e --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-boule-like.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-boule-like.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-brn124.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-brn124.xml new file mode 100644 index 0000000..27a0bc5 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-brn124.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-brn124.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-brn3a.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-brn3a.xml new file mode 100644 index 0000000..bd37a6e --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-brn3a.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-brn3a.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-bsx.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-bsx.xml new file mode 100644 index 0000000..047b136 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-bsx.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-bsx.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-cal2.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-cal2.xml new file mode 100644 index 0000000..1cb0f44 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-cal2.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-cal2.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-calexcitin2.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-calexcitin2.xml new file mode 100644 index 0000000..6dfd50f --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-calexcitin2.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-calexcitin2.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-calmodulin.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-calmodulin.xml new file mode 100644 index 0000000..8736050 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-calmodulin.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-calmodulin.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-catl.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-catl.xml new file mode 100644 index 0000000..6db6c1f --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-catl.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-catl.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-ccvd.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-ccvd.xml new file mode 100644 index 0000000..741e838 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-ccvd.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-ccvd.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-cepu1.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-cepu1.xml new file mode 100644 index 0000000..dc79367 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-cepu1.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-cepu1.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-chat.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-chat.xml new file mode 100644 index 0000000..0f096c3 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-chat.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-chat.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-chx10.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-chx10.xml new file mode 100644 index 0000000..619b6d6 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-chx10.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-chx10.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-cnga.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-cnga.xml new file mode 100644 index 0000000..1e74292 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-cnga.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-cnga.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-co1a1.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-co1a1.xml new file mode 100644 index 0000000..c72e66a --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-co1a1.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-co1a1.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-coe.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-coe.xml new file mode 100644 index 0000000..75960cf --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-coe.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-coe.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-dach.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-dach.xml new file mode 100644 index 0000000..82547d8 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-dach.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-dach.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-dbhlike.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-dbhlike.xml new file mode 100644 index 0000000..e81a704 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-dbhlike.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-dbhlike.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-dbx1.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-dbx1.xml new file mode 100644 index 0000000..1e4a4e7 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-dbx1.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-dbx1.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-delta.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-delta.xml new file mode 100644 index 0000000..cd917bb --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-delta.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-delta.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-dlx.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-dlx.xml new file mode 100644 index 0000000..1622945 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-dlx.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-dlx.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-dopard2.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-dopard2.xml new file mode 100644 index 0000000..12542b1 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-dopard2.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-dopard2.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-edu3to4at6dpf.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-edu3to4at6dpf.xml new file mode 100644 index 0000000..9b86cd9 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-edu3to4at6dpf.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-edu3to4at6dpf.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-edu42to48.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-edu42to48.xml new file mode 100644 index 0000000..044cafa --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-edu42to48.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-edu42to48.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-edu4to5at6dpf.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-edu4to5at6dpf.xml new file mode 100644 index 0000000..536ef74 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-edu4to5at6dpf.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-edu4to5at6dpf.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-edu5to6at6dpf.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-edu5to6at6dpf.xml new file mode 100644 index 0000000..7ce2566 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-edu5to6at6dpf.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-edu5to6at6dpf.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-elav.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-elav.xml new file mode 100644 index 0000000..7b41f4f --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-elav.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-elav.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-eve.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-eve.xml new file mode 100644 index 0000000..5df33d3 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-eve.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-eve.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-eya.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-eya.xml new file mode 100644 index 0000000..d4b6a25 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-eya.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-eya.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-fezf.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-fezf.xml new file mode 100644 index 0000000..ad5c1c1 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-fezf.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-fezf.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-for.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-for.xml new file mode 100644 index 0000000..e2954a1 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-for.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-for.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-foxd3.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-foxd3.xml new file mode 100644 index 0000000..c46b9df --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-foxd3.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-foxd3.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-foxn4.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-foxn4.xml new file mode 100644 index 0000000..aa1ffb4 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-foxn4.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-foxn4.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-fvri.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-fvri.xml new file mode 100644 index 0000000..6fa5b13 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-fvri.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-fvri.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-fxl21.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-fxl21.xml new file mode 100644 index 0000000..8803195 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-fxl21.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-fxl21.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-gad.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-gad.xml new file mode 100644 index 0000000..b04ad56 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-gad.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-gad.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-gata123.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-gata123.xml new file mode 100644 index 0000000..4083a27 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-gata123.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-gata123.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-gcb.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-gcb.xml new file mode 100644 index 0000000..8f87475 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-gcb.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-gcb.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-gcd.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-gcd.xml new file mode 100644 index 0000000..51cba85 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-gcd.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-gcd.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-gdpd1.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-gdpd1.xml new file mode 100644 index 0000000..4165da4 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-gdpd1.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-gdpd1.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-globin-like.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-globin-like.xml new file mode 100644 index 0000000..6bf8780 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-globin-like.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-globin-like.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-glt1.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-glt1.xml new file mode 100644 index 0000000..bb77cf1 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-glt1.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-glt1.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-glyt.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-glyt.xml new file mode 100644 index 0000000..a6ab514 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-glyt.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-glyt.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-gnrh.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-gnrh.xml new file mode 100644 index 0000000..b3ce8b6 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-gnrh.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-gnrh.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-gnrhr.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-gnrhr.xml new file mode 100644 index 0000000..73eaeca --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-gnrhr.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-gnrhr.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-gpb.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-gpb.xml new file mode 100644 index 0000000..485e28b --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-gpb.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-gpb.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-gpcr2.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-gpcr2.xml new file mode 100644 index 0000000..13f977d --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-gpcr2.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-gpcr2.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-gpcr203.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-gpcr203.xml new file mode 100644 index 0000000..edb0653 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-gpcr203.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-gpcr203.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-gpcr209.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-gpcr209.xml new file mode 100644 index 0000000..8a04ef9 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-gpcr209.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-gpcr209.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-gpcr210.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-gpcr210.xml new file mode 100644 index 0000000..f066849 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-gpcr210.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-gpcr210.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-gpcr32.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-gpcr32.xml new file mode 100644 index 0000000..d3cf263 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-gpcr32.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-gpcr32.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-gppcr21.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-gppcr21.xml new file mode 100644 index 0000000..83bd15b --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-gppcr21.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-gppcr21.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-grik3.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-grik3.xml new file mode 100644 index 0000000..2d6f442 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-grik3.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-grik3.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-grm7.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-grm7.xml new file mode 100644 index 0000000..99566fe --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-grm7.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-grm7.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-gsx.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-gsx.xml new file mode 100644 index 0000000..51b17fb --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-gsx.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-gsx.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-gucy.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-gucy.xml new file mode 100644 index 0000000..97c44d9 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-gucy.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-gucy.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-hand.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-hand.xml new file mode 100644 index 0000000..35bd7d1 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-hand.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-hand.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-hb9.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-hb9.xml new file mode 100644 index 0000000..6ceda08 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-hb9.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-hb9.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-hcn1.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-hcn1.xml new file mode 100644 index 0000000..c9d1618 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-hcn1.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-hcn1.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-hnf6.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-hnf6.xml new file mode 100644 index 0000000..14b20d4 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-hnf6.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-hnf6.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-hox1.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-hox1.xml new file mode 100644 index 0000000..e2691b2 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-hox1.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-hox1.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-hox4.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-hox4.xml new file mode 100644 index 0000000..1b9ccff --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-hox4.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-hox4.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-hox7.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-hox7.xml new file mode 100644 index 0000000..eaed27a --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-hox7.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-hox7.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-hr38.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-hr38.xml new file mode 100644 index 0000000..3e5a7b9 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-hr38.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-hr38.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-irx2546.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-irx2546.xml new file mode 100644 index 0000000..f68c04d --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-irx2546.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-irx2546.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-irx6.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-irx6.xml new file mode 100644 index 0000000..0853409 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-irx6.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-irx6.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-isl.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-isl.xml new file mode 100644 index 0000000..fc23f07 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-isl.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-isl.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-jkip3.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-jkip3.xml new file mode 100644 index 0000000..dcdce55 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-jkip3.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-jkip3.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-junctophilin1.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-junctophilin1.xml new file mode 100644 index 0000000..ab940a2 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-junctophilin1.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-junctophilin1.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-kanl3.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-kanl3.xml new file mode 100644 index 0000000..03abd22 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-kanl3.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-kanl3.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-kv33b.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-kv33b.xml new file mode 100644 index 0000000..6df9a5b --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-kv33b.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-kv33b.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-kv33e.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-kv33e.xml new file mode 100644 index 0000000..072172f --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-kv33e.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-kv33e.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-lbx1b.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-lbx1b.xml new file mode 100644 index 0000000..4241310 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-lbx1b.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-lbx1b.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-leucin-rich.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-leucin-rich.xml new file mode 100644 index 0000000..a016d14 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-leucin-rich.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-leucin-rich.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-lhx15.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-lhx15.xml new file mode 100644 index 0000000..9b20b75 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-lhx15.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-lhx15.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-lhx2.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-lhx2.xml new file mode 100644 index 0000000..2c94cc8 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-lhx2.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-lhx2.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-lhx3.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-lhx3.xml new file mode 100644 index 0000000..331a88a --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-lhx3.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-lhx3.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-lhx6.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-lhx6.xml new file mode 100644 index 0000000..eb4001b --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-lhx6.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-lhx6.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-lmo4.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-lmo4.xml new file mode 100644 index 0000000..b137db9 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-lmo4.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-lmo4.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-lmx1.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-lmx1.xml new file mode 100644 index 0000000..a4924d7 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-lmx1.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-lmx1.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-loc28250.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-loc28250.xml new file mode 100644 index 0000000..408a006 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-loc28250.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-loc28250.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-loc5285ct.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-loc5285ct.xml new file mode 100644 index 0000000..a6a6c9e --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-loc5285ct.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-loc5285ct.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-loc77859.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-loc77859.xml new file mode 100644 index 0000000..23d5dba --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-loc77859.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-loc77859.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-loc8913nt.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-loc8913nt.xml new file mode 100644 index 0000000..74a711e --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-loc8913nt.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-loc8913nt.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-maf.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-maf.xml new file mode 100644 index 0000000..d19e994 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-maf.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-maf.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-mecom.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-mecom.xml new file mode 100644 index 0000000..1944297 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-mecom.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-mecom.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-mhcl4.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-mhcl4.xml new file mode 100644 index 0000000..c97a228 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-mhcl4.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-mhcl4.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-mitf.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-mitf.xml new file mode 100644 index 0000000..4b0c665 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-mitf.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-mitf.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-mrlc2.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-mrlc2.xml new file mode 100644 index 0000000..7f855ab --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-mrlc2.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-mrlc2.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-msx.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-msx.xml new file mode 100644 index 0000000..3356f27 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-msx.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-msx.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-mthfsd.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-mthfsd.xml new file mode 100644 index 0000000..8eca253 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-mthfsd.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-mthfsd.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-munc22.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-munc22.xml new file mode 100644 index 0000000..34b56f9 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-munc22.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-munc22.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-muncb.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-muncb.xml new file mode 100644 index 0000000..cbe0dd8 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-muncb.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-muncb.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-nachr.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-nachr.xml new file mode 100644 index 0000000..7a34a26 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-nachr.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-nachr.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-nb5r3.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-nb5r3.xml new file mode 100644 index 0000000..d795396 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-nb5r3.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-nb5r3.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-ndus1.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-ndus1.xml new file mode 100644 index 0000000..31c3cc1 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-ndus1.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-ndus1.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-neog.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-neog.xml new file mode 100644 index 0000000..3d87783 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-neog.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-neog.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-netrin.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-netrin.xml new file mode 100644 index 0000000..1196cad --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-netrin.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-netrin.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-neurod.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-neurod.xml new file mode 100644 index 0000000..6c6370b --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-neurod.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-neurod.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-ngb.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-ngb.xml new file mode 100644 index 0000000..e1d0312 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-ngb.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-ngb.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-ngn.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-ngn.xml new file mode 100644 index 0000000..9a8ad8e --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-ngn.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-ngn.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-nk21.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-nk21.xml new file mode 100644 index 0000000..bed0300 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-nk21.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-nk21.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-nk22.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-nk22.xml new file mode 100644 index 0000000..e97c950 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-nk22.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-nk22.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-nk6.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-nk6.xml new file mode 100644 index 0000000..8e39a5c --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-nk6.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-nk6.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-nmdar.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-nmdar.xml new file mode 100644 index 0000000..f1debe1 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-nmdar.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-nmdar.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-noe1.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-noe1.xml new file mode 100644 index 0000000..c119fb8 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-noe1.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-noe1.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-nompc3.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-nompc3.xml new file mode 100644 index 0000000..0c1009a --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-nompc3.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-nompc3.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-non-muscle-mhc.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-non-muscle-mhc.xml new file mode 100644 index 0000000..7c05582 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-non-muscle-mhc.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-non-muscle-mhc.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-nov2.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-nov2.xml new file mode 100644 index 0000000..7d3cd6f --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-nov2.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-nov2.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-nov29.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-nov29.xml new file mode 100644 index 0000000..ae3a214 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-nov29.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-nov29.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-npr1a.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-npr1a.xml new file mode 100644 index 0000000..e26cb47 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-npr1a.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-npr1a.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-ntrps.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-ntrps.xml new file mode 100644 index 0000000..a8dfa35 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-ntrps.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-ntrps.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-nucleolin.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-nucleolin.xml new file mode 100644 index 0000000..7a1d335 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-nucleolin.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-nucleolin.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-odo2.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-odo2.xml new file mode 100644 index 0000000..9168c5c --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-odo2.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-odo2.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-olig.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-olig.xml new file mode 100644 index 0000000..5c535ea --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-olig.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-olig.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-olm2a.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-olm2a.xml new file mode 100644 index 0000000..1cf217a --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-olm2a.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-olm2a.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-otp.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-otp.xml new file mode 100644 index 0000000..2f8082a --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-otp.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-otp.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-p56.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-p56.xml new file mode 100644 index 0000000..50b7ef5 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-p56.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-p56.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-paraxis.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-paraxis.xml new file mode 100644 index 0000000..756e8f5 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-paraxis.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-paraxis.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-patched.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-patched.xml new file mode 100644 index 0000000..03452b1 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-patched.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-patched.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-pax258.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-pax258.xml new file mode 100644 index 0000000..55af96a --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-pax258.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-pax258.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-pax6.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-pax6.xml new file mode 100644 index 0000000..a120da9 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-pax6.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-pax6.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-pcdh15.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-pcdh15.xml new file mode 100644 index 0000000..837026c --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-pcdh15.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-pcdh15.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-pde9.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-pde9.xml new file mode 100644 index 0000000..49ce509 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-pde9.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-pde9.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-pdf.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-pdf.xml new file mode 100644 index 0000000..903c8e1 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-pdf.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-pdf.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-pea3.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-pea3.xml new file mode 100644 index 0000000..0b472d2 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-pea3.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-pea3.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-pgam.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-pgam.xml new file mode 100644 index 0000000..143e253 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-pgam.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-pgam.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-phc2.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-phc2.xml new file mode 100644 index 0000000..ebccdcd --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-phc2.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-phc2.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-phox2b.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-phox2b.xml new file mode 100644 index 0000000..61a5685 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-phox2b.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-phox2b.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-pikachu.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-pikachu.xml new file mode 100644 index 0000000..b8e0def --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-pikachu.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-pikachu.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-pitxb.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-pitxb.xml new file mode 100644 index 0000000..0df1f6c --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-pitxb.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-pitxb.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-pkd1.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-pkd1.xml new file mode 100644 index 0000000..55acb85 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-pkd1.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-pkd1.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-pkd2.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-pkd2.xml new file mode 100644 index 0000000..916779f --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-pkd2.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-pkd2.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-plcg.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-plcg.xml new file mode 100644 index 0000000..f38cad3 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-plcg.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-plcg.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-ppib.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-ppib.xml new file mode 100644 index 0000000..8ede8bf --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-ppib.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-ppib.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-prdm8.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-prdm8.xml new file mode 100644 index 0000000..2a4e932 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-prdm8.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-prdm8.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-prox.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-prox.xml new file mode 100644 index 0000000..2e73b92 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-prox.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-prox.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-psmf1.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-psmf1.xml new file mode 100644 index 0000000..3d27c97 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-psmf1.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-psmf1.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-ptf1.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-ptf1.xml new file mode 100644 index 0000000..37a77ab --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-ptf1.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-ptf1.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-rab3.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-rab3.xml new file mode 100644 index 0000000..46a8470 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-rab3.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-rab3.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-rims.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-rims.xml new file mode 100644 index 0000000..fe3fd7b --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-rims.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-rims.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-robo.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-robo.xml new file mode 100644 index 0000000..b9cfb36 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-robo.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-robo.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-rpc2.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-rpc2.xml new file mode 100644 index 0000000..2587003 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-rpc2.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-rpc2.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/prospr-6dpf-1-whole-AChE-MED.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-rx.xml similarity index 91% rename from data/0.6.5/images/prospr-6dpf-1-whole-AChE-MED.xml rename to data/0.6.5/images/local/prospr-6dpf-1-whole-rx.xml index daf020d..4b77cb5 100644 --- a/data/0.6.5/images/prospr-6dpf-1-whole-AChE-MED.xml +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-rx.xml @@ -2,7 +2,7 @@ <BasePath type="relative">.</BasePath> <SequenceDescription> <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.6.3/images/prospr-6dpf-1-whole-AChE-MED.h5</hdf5> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-rx.h5</hdf5> </ImageLoader> <ViewSetups> <Attributes name="channel"> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-ryr2.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-ryr2.xml new file mode 100644 index 0000000..6e22add --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-ryr2.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-ryr2.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-scn8aa.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-scn8aa.xml new file mode 100644 index 0000000..bc5bb50 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-scn8aa.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-scn8aa.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-segmented-allglands.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-segmented-allglands.xml new file mode 100644 index 0000000..18825f1 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-segmented-allglands.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-segmented-allglands.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-segmented-crypticsegment.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-segmented-crypticsegment.xml new file mode 100644 index 0000000..718e1e8 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-segmented-crypticsegment.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-segmented-crypticsegment.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-segmented-foregut.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-segmented-foregut.xml new file mode 100644 index 0000000..49c39c5 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-segmented-foregut.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-segmented-foregut.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-segmented-glands.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-segmented-glands.xml new file mode 100644 index 0000000..0b50030 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-segmented-glands.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-segmented-glands.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-segmented-head.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-segmented-head.xml new file mode 100644 index 0000000..42cb142 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-segmented-head.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-segmented-head.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-segmented-lateralectoderm.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-segmented-lateralectoderm.xml new file mode 100644 index 0000000..0465a19 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-segmented-lateralectoderm.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-segmented-lateralectoderm.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-segmented-prospr6-ref.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-segmented-prospr6-ref.xml new file mode 100644 index 0000000..0448db1 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-segmented-prospr6-ref.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-segmented-prospr6-ref.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-segmented-pygidium.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-segmented-pygidium.xml new file mode 100644 index 0000000..4a098c8 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-segmented-pygidium.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-segmented-pygidium.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-segmented-restofanimal.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-segmented-restofanimal.xml new file mode 100644 index 0000000..514e705 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-segmented-restofanimal.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-segmented-restofanimal.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-segmented-vnc.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-segmented-vnc.xml new file mode 100644 index 0000000..a415b2a --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-segmented-vnc.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-segmented-vnc.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-sema2.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-sema2.xml new file mode 100644 index 0000000..ae95671 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-sema2.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-sema2.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-sert.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-sert.xml new file mode 100644 index 0000000..2184983 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-sert.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-sert.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-sim1.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-sim1.xml new file mode 100644 index 0000000..479356c --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-sim1.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-sim1.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-six12.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-six12.xml new file mode 100644 index 0000000..339ffc1 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-six12.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-six12.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-six4.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-six4.xml new file mode 100644 index 0000000..410701f --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-six4.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-six4.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-slit.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-slit.xml new file mode 100644 index 0000000..0ab762b --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-slit.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-slit.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-snd1.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-snd1.xml new file mode 100644 index 0000000..11e548c --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-snd1.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-snd1.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-sox2.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-sox2.xml new file mode 100644 index 0000000..1d0e1e8 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-sox2.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-sox2.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-sox4.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-sox4.xml new file mode 100644 index 0000000..fd84ca4 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-sox4.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-sox4.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-soxb12.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-soxb12.xml new file mode 100644 index 0000000..42d06a2 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-soxb12.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-soxb12.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-soxb2.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-soxb2.xml new file mode 100644 index 0000000..038719e --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-soxb2.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-soxb2.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-sp8.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-sp8.xml new file mode 100644 index 0000000..49cbe22 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-sp8.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-sp8.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-stathmin.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-stathmin.xml new file mode 100644 index 0000000..6ea0f8f --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-stathmin.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-stathmin.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-synaptopodin.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-synaptopodin.xml new file mode 100644 index 0000000..87aac72 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-synaptopodin.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-synaptopodin.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-syt.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-syt.xml new file mode 100644 index 0000000..c6be4f5 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-syt.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-syt.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-syt12.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-syt12.xml new file mode 100644 index 0000000..0848a8e --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-syt12.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-syt12.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-syt7.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-syt7.xml new file mode 100644 index 0000000..1fb550a --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-syt7.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-syt7.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-syta.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-syta.xml new file mode 100644 index 0000000..86840d7 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-syta.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-syta.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-tal.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-tal.xml new file mode 100644 index 0000000..c323f6e --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-tal.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-tal.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-tbh.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-tbh.xml new file mode 100644 index 0000000..4625d87 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-tbh.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-tbh.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-tbx20.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-tbx20.xml new file mode 100644 index 0000000..f1e0ff5 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-tbx20.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-tbx20.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/prospr-6dpf-1-whole-ANPRA-MED.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-th.xml similarity index 91% rename from data/0.6.5/images/prospr-6dpf-1-whole-ANPRA-MED.xml rename to data/0.6.5/images/local/prospr-6dpf-1-whole-th.xml index 6fdc706..1c16c8f 100644 --- a/data/0.6.5/images/prospr-6dpf-1-whole-ANPRA-MED.xml +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-th.xml @@ -2,7 +2,7 @@ <BasePath type="relative">.</BasePath> <SequenceDescription> <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.6.3/images/prospr-6dpf-1-whole-ANPRA-MED.h5</hdf5> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-th.h5</hdf5> </ImageLoader> <ViewSetups> <Attributes name="channel"> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-timp.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-timp.xml new file mode 100644 index 0000000..e67596c --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-timp.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-timp.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-tlx.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-tlx.xml new file mode 100644 index 0000000..83238fc --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-tlx.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-tlx.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-tmtc3.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-tmtc3.xml new file mode 100644 index 0000000..8cddb03 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-tmtc3.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-tmtc3.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-trk.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-trk.xml new file mode 100644 index 0000000..e8b88b8 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-trk.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-trk.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-trph.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-trph.xml new file mode 100644 index 0000000..28e8fa2 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-trph.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-trph.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-trpv.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-trpv.xml new file mode 100644 index 0000000..8139c62 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-trpv.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-trpv.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-trpv4.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-trpv4.xml new file mode 100644 index 0000000..f927713 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-trpv4.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-trpv4.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-trpv5.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-trpv5.xml new file mode 100644 index 0000000..03b8745 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-trpv5.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-trpv5.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-twist.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-twist.xml new file mode 100644 index 0000000..20dac16 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-twist.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-twist.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-unc22.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-unc22.xml new file mode 100644 index 0000000..922b941 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-unc22.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-unc22.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-uncs.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-uncs.xml new file mode 100644 index 0000000..78349c2 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-uncs.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-uncs.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-uncx.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-uncx.xml new file mode 100644 index 0000000..ab3362e --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-uncx.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-uncx.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-upp.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-upp.xml new file mode 100644 index 0000000..379dc6f --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-upp.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-upp.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-usp9x.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-usp9x.xml new file mode 100644 index 0000000..6be60e1 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-usp9x.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-usp9x.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-vacht.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-vacht.xml new file mode 100644 index 0000000..792a4ca --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-vacht.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-vacht.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-vat1l.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-vat1l.xml new file mode 100644 index 0000000..3a6b019 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-vat1l.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-vat1l.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-vegfr.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-vegfr.xml new file mode 100644 index 0000000..8026ee3 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-vegfr.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-vegfr.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-vglut.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-vglut.xml new file mode 100644 index 0000000..dd9d772 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-vglut.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-vglut.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-virtual-cells.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-virtual-cells.xml new file mode 100644 index 0000000..28cb9bf --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-virtual-cells.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-virtual-cells.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-wnt16.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-wnt16.xml new file mode 100644 index 0000000..732dbd6 --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-wnt16.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-wnt16.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/local/prospr-6dpf-1-whole-wnt5.xml b/data/0.6.5/images/local/prospr-6dpf-1-whole-wnt5.xml new file mode 100644 index 0000000..80b208c --- /dev/null +++ b/data/0.6.5/images/local/prospr-6dpf-1-whole-wnt5.xml @@ -0,0 +1,39 @@ +<SpimData version="0.2"> + <BasePath type="relative">.</BasePath> + <SequenceDescription> + <ImageLoader format="bdv.hdf5"> + <hdf5 type="relative">../../../0.6.3/images/local/prospr-6dpf-1-whole-wnt5.h5</hdf5> + </ImageLoader> + <ViewSetups> + <Attributes name="channel"> + <Channel> + <id>0</id> + <name>0</name> + </Channel> + </Attributes> + <ViewSetup> + <id>0</id> + <name>Setup0</name> + <size>500 471 519</size> + <voxelSize> + <unit>micrometer</unit> + <size>0.55 0.55 0.55</size> + </voxelSize> + <attributes> + <channel>0</channel> + </attributes> + </ViewSetup> + </ViewSetups> + <Timepoints type="range"> + <first>0</first> + <last>0</last> + </Timepoints> + </SequenceDescription> + <ViewRegistrations> + <ViewRegistration setup="0" timepoint="0"> + <ViewTransform type="affine"> + <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> + </ViewTransform> + </ViewRegistration> + </ViewRegistrations> +</SpimData> diff --git a/data/0.6.5/images/sbem-6dpf-1-whole-raw.xml b/data/0.6.5/images/local/sbem-6dpf-1-whole-raw.xml similarity index 92% rename from data/0.6.5/images/sbem-6dpf-1-whole-raw.xml rename to data/0.6.5/images/local/sbem-6dpf-1-whole-raw.xml index fcf8dfd..5bcba36 100644 --- a/data/0.6.5/images/sbem-6dpf-1-whole-raw.xml +++ b/data/0.6.5/images/local/sbem-6dpf-1-whole-raw.xml @@ -2,7 +2,7 @@ <BasePath type="relative">.</BasePath> <SequenceDescription> <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../rawdata/sbem-6dpf-1-whole-raw.h5</hdf5> + <hdf5 type="relative">../../../rawdata/sbem-6dpf-1-whole-raw.h5</hdf5> </ImageLoader> <ViewSetups> <Attributes name="channel"> diff --git a/data/0.6.5/segmentations/sbem-6dpf-1-whole-segmented-cells-labels.xml b/data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-cells.xml similarity index 92% rename from data/0.6.5/segmentations/sbem-6dpf-1-whole-segmented-cells-labels.xml rename to data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-cells.xml index 5a00028..9605c3a 100644 --- a/data/0.6.5/segmentations/sbem-6dpf-1-whole-segmented-cells-labels.xml +++ b/data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-cells.xml @@ -2,7 +2,7 @@ <BasePath type="relative">.</BasePath> <SequenceDescription> <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">sbem-6dpf-1-whole-segmented-cells-labels.h5</hdf5> + <hdf5 type="relative">sbem-6dpf-1-whole-segmented-cells.h5</hdf5> </ImageLoader> <ViewSetups> <Attributes name="channel"> diff --git a/data/0.6.5/segmentations/sbem-6dpf-1-whole-segmented-chromatin-labels.xml b/data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-chromatin.xml similarity index 91% rename from data/0.6.5/segmentations/sbem-6dpf-1-whole-segmented-chromatin-labels.xml rename to data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-chromatin.xml index 25dd2b4..e1e82b0 100644 --- a/data/0.6.5/segmentations/sbem-6dpf-1-whole-segmented-chromatin-labels.xml +++ b/data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-chromatin.xml @@ -2,7 +2,7 @@ <BasePath type="relative">.</BasePath> <SequenceDescription> <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../rawdata/sbem-6dpf-1-whole-segmented-chromatin-labels.h5</hdf5> + <hdf5 type="relative">../../../rawdata/sbem-6dpf-1-whole-segmented-chromatin.h5</hdf5> </ImageLoader> <ViewSetups> <Attributes name="channel"> diff --git a/data/0.6.5/segmentations/sbem-6dpf-1-whole-segmented-cilia-labels.xml b/data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-cilia.xml similarity index 90% rename from data/0.6.5/segmentations/sbem-6dpf-1-whole-segmented-cilia-labels.xml rename to data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-cilia.xml index 1736936..4ace6f7 100644 --- a/data/0.6.5/segmentations/sbem-6dpf-1-whole-segmented-cilia-labels.xml +++ b/data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-cilia.xml @@ -2,7 +2,7 @@ <BasePath type="relative">.</BasePath> <SequenceDescription> <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.6.2/segmentations/sbem-6dpf-1-whole-segmented-cilia-labels.h5</hdf5> + <hdf5 type="relative">../../../0.6.2/images/local/sbem-6dpf-1-whole-segmented-cilia.h5</hdf5> </ImageLoader> <ViewSetups> <Attributes name="channel"> diff --git a/data/0.6.5/segmentations/sbem-6dpf-1-whole-segmented-ganglia-labels.xml b/data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-extrapolated.xml similarity index 91% rename from data/0.6.5/segmentations/sbem-6dpf-1-whole-segmented-ganglia-labels.xml rename to data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-extrapolated.xml index 9d7c6f7..6eec23b 100644 --- a/data/0.6.5/segmentations/sbem-6dpf-1-whole-segmented-ganglia-labels.xml +++ b/data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-extrapolated.xml @@ -2,7 +2,7 @@ <BasePath type="relative">.</BasePath> <SequenceDescription> <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../rawdata/sbem-6dpf-1-whole-segmented-ganglia-labels.h5</hdf5> + <hdf5 type="relative">../../../rawdata/sbem-6dpf-1-whole-segmented-extrapolated.h5</hdf5> </ImageLoader> <ViewSetups> <Attributes name="channel"> diff --git a/data/0.6.5/images/sbem-6dpf-1-whole-mask-extrapolated.xml b/data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-ganglia.xml similarity index 91% rename from data/0.6.5/images/sbem-6dpf-1-whole-mask-extrapolated.xml rename to data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-ganglia.xml index c508249..b23ffe0 100644 --- a/data/0.6.5/images/sbem-6dpf-1-whole-mask-extrapolated.xml +++ b/data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-ganglia.xml @@ -2,7 +2,7 @@ <BasePath type="relative">.</BasePath> <SequenceDescription> <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../rawdata/sbem-6dpf-1-whole-mask-extrapolated.h5</hdf5> + <hdf5 type="relative">../../../rawdata/sbem-6dpf-1-whole-segmented-ganglia.h5</hdf5> </ImageLoader> <ViewSetups> <Attributes name="channel"> diff --git a/data/0.6.5/images/sbem-6dpf-1-whole-mask-inside.xml b/data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-inside.xml similarity index 91% rename from data/0.6.5/images/sbem-6dpf-1-whole-mask-inside.xml rename to data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-inside.xml index 9c923a7..2da1264 100644 --- a/data/0.6.5/images/sbem-6dpf-1-whole-mask-inside.xml +++ b/data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-inside.xml @@ -2,7 +2,7 @@ <BasePath type="relative">.</BasePath> <SequenceDescription> <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../rawdata/sbem-6dpf-1-whole-mask-inside.h5</hdf5> + <hdf5 type="relative">../../../rawdata/sbem-6dpf-1-whole-segmented-inside.h5</hdf5> </ImageLoader> <ViewSetups> <Attributes name="channel"> diff --git a/data/0.6.5/segmentations/sbem-6dpf-1-whole-segmented-midgut.xml b/data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-midgut.xml similarity index 91% rename from data/0.6.5/segmentations/sbem-6dpf-1-whole-segmented-midgut.xml rename to data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-midgut.xml index 2874daa..6746dd1 100644 --- a/data/0.6.5/segmentations/sbem-6dpf-1-whole-segmented-midgut.xml +++ b/data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-midgut.xml @@ -2,7 +2,7 @@ <BasePath type="relative">.</BasePath> <SequenceDescription> <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../rawdata/sbem-6dpf-1-whole-segmented-midgut.h5</hdf5> + <hdf5 type="relative">../../../rawdata/sbem-6dpf-1-whole-segmented-midgut.h5</hdf5> </ImageLoader> <ViewSetups> <Attributes name="channel"> diff --git a/data/0.6.5/segmentations/sbem-6dpf-1-whole-segmented-muscle.xml b/data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-muscle.xml similarity index 91% rename from data/0.6.5/segmentations/sbem-6dpf-1-whole-segmented-muscle.xml rename to data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-muscle.xml index 26ba713..e70beed 100644 --- a/data/0.6.5/segmentations/sbem-6dpf-1-whole-segmented-muscle.xml +++ b/data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-muscle.xml @@ -2,7 +2,7 @@ <BasePath type="relative">.</BasePath> <SequenceDescription> <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../rawdata/sbem-6dpf-1-whole-segmented-muscle.h5</hdf5> + <hdf5 type="relative">../../../rawdata/sbem-6dpf-1-whole-segmented-muscle.h5</hdf5> </ImageLoader> <ViewSetups> <ViewSetup> diff --git a/data/0.6.5/segmentations/sbem-6dpf-1-whole-segmented-nephridia.xml b/data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-nephridia.xml similarity index 91% rename from data/0.6.5/segmentations/sbem-6dpf-1-whole-segmented-nephridia.xml rename to data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-nephridia.xml index ba8625a..ce8e776 100644 --- a/data/0.6.5/segmentations/sbem-6dpf-1-whole-segmented-nephridia.xml +++ b/data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-nephridia.xml @@ -2,7 +2,7 @@ <BasePath type="relative">.</BasePath> <SequenceDescription> <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../sbem-6dpf-1-whole-segmented-nephridia.h5</hdf5> + <hdf5 type="relative">../../../rawdata/sbem-6dpf-1-whole-segmented-nephridia.h5</hdf5> </ImageLoader> <ViewSetups> <Attributes name="channel"> diff --git a/data/0.6.5/segmentations/sbem-6dpf-1-whole-segmented-ariande-neuropil.xml b/data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-neuropil.xml similarity index 91% rename from data/0.6.5/segmentations/sbem-6dpf-1-whole-segmented-ariande-neuropil.xml rename to data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-neuropil.xml index 2b06347..ed6d3cf 100644 --- a/data/0.6.5/segmentations/sbem-6dpf-1-whole-segmented-ariande-neuropil.xml +++ b/data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-neuropil.xml @@ -2,7 +2,7 @@ <BasePath type="relative">.</BasePath> <SequenceDescription> <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../rawdata/sbem-6dpf-1-whole-segmented-ariande-neuropil.h5</hdf5> + <hdf5 type="relative">../../../rawdata/sbem-6dpf-1-whole-segmented-neuropil.h5</hdf5> </ImageLoader> <ViewSetups> <ViewSetup> diff --git a/data/0.6.5/segmentations/sbem-6dpf-1-whole-segmented-nuclei-labels.xml b/data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-nuclei.xml similarity index 90% rename from data/0.6.5/segmentations/sbem-6dpf-1-whole-segmented-nuclei-labels.xml rename to data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-nuclei.xml index f818c38..1f61d26 100644 --- a/data/0.6.5/segmentations/sbem-6dpf-1-whole-segmented-nuclei-labels.xml +++ b/data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-nuclei.xml @@ -2,7 +2,7 @@ <BasePath type="relative">.</BasePath> <SequenceDescription> <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.0.0/segmentations/sbem-6dpf-1-whole-segmented-nuclei-labels.h5</hdf5> + <hdf5 type="relative">../../../0.0.0/images/local/sbem-6dpf-1-whole-segmented-nuclei.h5</hdf5> </ImageLoader> <ViewSetups> <Attributes name="channel"> diff --git a/data/0.6.5/images/sbem-6dpf-1-whole-mask-outside.xml b/data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-outside.xml similarity index 91% rename from data/0.6.5/images/sbem-6dpf-1-whole-mask-outside.xml rename to data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-outside.xml index 5f3be7f..c0a4209 100644 --- a/data/0.6.5/images/sbem-6dpf-1-whole-mask-outside.xml +++ b/data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-outside.xml @@ -2,7 +2,7 @@ <BasePath type="relative">.</BasePath> <SequenceDescription> <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../rawdata/sbem-6dpf-1-whole-mask-outside.h5</hdf5> + <hdf5 type="relative">../../../rawdata/sbem-6dpf-1-whole-segmented-outside.h5</hdf5> </ImageLoader> <ViewSetups> <Attributes name="channel"> diff --git a/data/0.6.5/images/sbem-6dpf-1-whole-mask-resin.xml b/data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-resin.xml similarity index 91% rename from data/0.6.5/images/sbem-6dpf-1-whole-mask-resin.xml rename to data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-resin.xml index f71df8d..098e39d 100644 --- a/data/0.6.5/images/sbem-6dpf-1-whole-mask-resin.xml +++ b/data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-resin.xml @@ -2,7 +2,7 @@ <BasePath type="relative">.</BasePath> <SequenceDescription> <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../rawdata/sbem-6dpf-1-whole-mask-resin.h5</hdf5> + <hdf5 type="relative">../../../rawdata/sbem-6dpf-1-whole-segmented-resin.h5</hdf5> </ImageLoader> <ViewSetups> <Attributes name="channel"> diff --git a/data/0.6.5/segmentations/sbem-6dpf-1-whole-segmented-tissue-labels.xml b/data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-tissue.xml similarity index 91% rename from data/0.6.5/segmentations/sbem-6dpf-1-whole-segmented-tissue-labels.xml rename to data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-tissue.xml index 390dbdb..767f2a6 100644 --- a/data/0.6.5/segmentations/sbem-6dpf-1-whole-segmented-tissue-labels.xml +++ b/data/0.6.5/images/local/sbem-6dpf-1-whole-segmented-tissue.xml @@ -2,7 +2,7 @@ <BasePath type="relative">.</BasePath> <SequenceDescription> <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../rawdata/sbem-6dpf-1-whole-segmented-tissue-labels.h5</hdf5> + <hdf5 type="relative">../../../rawdata/sbem-6dpf-1-whole-segmented-tissue.h5</hdf5> </ImageLoader> <ViewSetups> <Attributes name="channel"> diff --git a/data/0.6.5/images/prospr-6dpf-1-whole-ASCb-MED.xml b/data/0.6.5/images/prospr-6dpf-1-whole-ASCb-MED.xml deleted file mode 100644 index 36581fd..0000000 --- a/data/0.6.5/images/prospr-6dpf-1-whole-ASCb-MED.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.6.3/images/prospr-6dpf-1-whole-ASCb-MED.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - <ViewRegistrations> - <ViewRegistration setup="0" timepoint="0"> - <ViewTransform type="affine"> - <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> - </ViewTransform> - </ViewRegistration> - </ViewRegistrations> -</SpimData> diff --git a/data/0.6.5/images/prospr-6dpf-1-whole-AllCR1-MED.xml b/data/0.6.5/images/prospr-6dpf-1-whole-AllCR1-MED.xml deleted file mode 100644 index 06fbae9..0000000 --- a/data/0.6.5/images/prospr-6dpf-1-whole-AllCR1-MED.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.6.3/images/prospr-6dpf-1-whole-AllCR1-MED.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - <ViewRegistrations> - <ViewRegistration setup="0" timepoint="0"> - <ViewTransform type="affine"> - <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> - </ViewTransform> - </ViewRegistration> - </ViewRegistrations> -</SpimData> diff --git a/data/0.6.5/images/prospr-6dpf-1-whole-AllCR2-MED.xml b/data/0.6.5/images/prospr-6dpf-1-whole-AllCR2-MED.xml deleted file mode 100644 index ff7de68..0000000 --- a/data/0.6.5/images/prospr-6dpf-1-whole-AllCR2-MED.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.6.3/images/prospr-6dpf-1-whole-AllCR2-MED.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - <ViewRegistrations> - <ViewRegistration setup="0" timepoint="0"> - <ViewTransform type="affine"> - <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> - </ViewTransform> - </ViewRegistration> - </ViewRegistrations> -</SpimData> diff --git a/data/0.6.5/images/prospr-6dpf-1-whole-Arx-MED.xml b/data/0.6.5/images/prospr-6dpf-1-whole-Arx-MED.xml deleted file mode 100644 index 25f459f..0000000 --- a/data/0.6.5/images/prospr-6dpf-1-whole-Arx-MED.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.6.3/images/prospr-6dpf-1-whole-Arx-MED.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - <ViewRegistrations> - <ViewRegistration setup="0" timepoint="0"> - <ViewTransform type="affine"> - <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> - </ViewTransform> - </ViewRegistration> - </ViewRegistrations> -</SpimData> diff --git a/data/0.6.5/images/prospr-6dpf-1-whole-Ash-MED.xml b/data/0.6.5/images/prospr-6dpf-1-whole-Ash-MED.xml deleted file mode 100644 index 1329484..0000000 --- a/data/0.6.5/images/prospr-6dpf-1-whole-Ash-MED.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.6.3/images/prospr-6dpf-1-whole-Ash-MED.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - <ViewRegistrations> - <ViewRegistration setup="0" timepoint="0"> - <ViewTransform type="affine"> - <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> - </ViewTransform> - </ViewRegistration> - </ViewRegistrations> -</SpimData> diff --git a/data/0.6.5/images/prospr-6dpf-1-whole-BAIAP-MED.xml b/data/0.6.5/images/prospr-6dpf-1-whole-BAIAP-MED.xml deleted file mode 100644 index c2f5f58..0000000 --- a/data/0.6.5/images/prospr-6dpf-1-whole-BAIAP-MED.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.6.3/images/prospr-6dpf-1-whole-BAIAP-MED.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - 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<voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - <ViewRegistrations> - <ViewRegistration setup="0" timepoint="0"> - <ViewTransform type="affine"> - <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> - </ViewTransform> - </ViewRegistration> - </ViewRegistrations> -</SpimData> diff --git a/data/0.6.5/images/prospr-6dpf-1-whole-Beta3-MED.xml b/data/0.6.5/images/prospr-6dpf-1-whole-Beta3-MED.xml deleted file mode 100644 index 1ab0dd4..0000000 --- a/data/0.6.5/images/prospr-6dpf-1-whole-Beta3-MED.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.6.3/images/prospr-6dpf-1-whole-Beta3-MED.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - <ViewRegistrations> - <ViewRegistration setup="0" timepoint="0"> - <ViewTransform type="affine"> - <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> - </ViewTransform> - </ViewRegistration> - </ViewRegistrations> -</SpimData> diff --git a/data/0.6.5/images/prospr-6dpf-1-whole-Bmpr1-MED.xml b/data/0.6.5/images/prospr-6dpf-1-whole-Bmpr1-MED.xml deleted file mode 100644 index 2faa085..0000000 --- a/data/0.6.5/images/prospr-6dpf-1-whole-Bmpr1-MED.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - 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b/data/0.6.5/images/prospr-6dpf-1-whole-Brn124-MED.xml deleted file mode 100644 index 92bcfbe..0000000 --- a/data/0.6.5/images/prospr-6dpf-1-whole-Brn124-MED.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.6.3/images/prospr-6dpf-1-whole-Brn124-MED.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - <ViewRegistrations> - <ViewRegistration setup="0" timepoint="0"> - <ViewTransform type="affine"> - <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> - </ViewTransform> - </ViewRegistration> - </ViewRegistrations> -</SpimData> diff --git a/data/0.6.5/images/prospr-6dpf-1-whole-Brn3a-MED.xml b/data/0.6.5/images/prospr-6dpf-1-whole-Brn3a-MED.xml deleted file mode 100644 index 654f76b..0000000 --- a/data/0.6.5/images/prospr-6dpf-1-whole-Brn3a-MED.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.6.3/images/prospr-6dpf-1-whole-Brn3a-MED.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints 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a/data/0.6.5/images/prospr-6dpf-1-whole-ChAT-MED.xml b/data/0.6.5/images/prospr-6dpf-1-whole-ChAT-MED.xml deleted file mode 100644 index 37efbff..0000000 --- a/data/0.6.5/images/prospr-6dpf-1-whole-ChAT-MED.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.6.3/images/prospr-6dpf-1-whole-ChAT-MED.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - <ViewRegistrations> - <ViewRegistration setup="0" timepoint="0"> 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a/data/0.6.5/images/prospr-6dpf-1-whole-ENR31-Leucin-rich-MED.xml b/data/0.6.5/images/prospr-6dpf-1-whole-ENR31-Leucin-rich-MED.xml deleted file mode 100644 index cdda6a9..0000000 --- a/data/0.6.5/images/prospr-6dpf-1-whole-ENR31-Leucin-rich-MED.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.6.3/images/prospr-6dpf-1-whole-ENR31-Leucin-rich-MED.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - 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a/data/0.6.5/images/prospr-6dpf-1-whole-NOV6-Stathmin-MED.xml b/data/0.6.5/images/prospr-6dpf-1-whole-NOV6-Stathmin-MED.xml deleted file mode 100644 index 2438bee..0000000 --- a/data/0.6.5/images/prospr-6dpf-1-whole-NOV6-Stathmin-MED.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.6.3/images/prospr-6dpf-1-whole-NOV6-Stathmin-MED.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - <ViewRegistrations> - 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b/data/0.6.5/images/prospr-6dpf-1-whole-muncB-MED.xml deleted file mode 100644 index 5646a82..0000000 --- a/data/0.6.5/images/prospr-6dpf-1-whole-muncB-MED.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.6.3/images/prospr-6dpf-1-whole-muncB-MED.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - <ViewRegistrations> - <ViewRegistration setup="0" timepoint="0"> - <ViewTransform type="affine"> - <affine>0.55 0.0 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b/data/0.6.5/images/prospr-6dpf-1-whole-nk22-MED.xml deleted file mode 100644 index 28cf485..0000000 --- a/data/0.6.5/images/prospr-6dpf-1-whole-nk22-MED.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.6.3/images/prospr-6dpf-1-whole-nk22-MED.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - <ViewRegistrations> - <ViewRegistration setup="0" timepoint="0"> - <ViewTransform type="affine"> - <affine>0.55 0.0 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b/data/0.6.5/images/prospr-6dpf-1-whole-paraxis-MED.xml deleted file mode 100644 index e8bb0f8..0000000 --- a/data/0.6.5/images/prospr-6dpf-1-whole-paraxis-MED.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.6.3/images/prospr-6dpf-1-whole-paraxis-MED.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - <ViewRegistrations> - <ViewRegistration setup="0" timepoint="0"> - <ViewTransform type="affine"> - 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a/data/0.6.5/images/prospr-6dpf-1-whole-segmented-CrypticSegment.xml b/data/0.6.5/images/prospr-6dpf-1-whole-segmented-CrypticSegment.xml deleted file mode 100644 index 252c606..0000000 --- a/data/0.6.5/images/prospr-6dpf-1-whole-segmented-CrypticSegment.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.6.3/images/prospr-6dpf-1-whole-segmented-CrypticSegment.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - 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b/data/0.6.5/images/prospr-6dpf-1-whole-segmented-ProSPr6-Ref.xml deleted file mode 100644 index a7c5acb..0000000 --- a/data/0.6.5/images/prospr-6dpf-1-whole-segmented-ProSPr6-Ref.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.6.3/images/prospr-6dpf-1-whole-segmented-ProSPr6-Ref.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - <ViewRegistrations> - <ViewRegistration setup="0" timepoint="0"> - 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b/data/0.6.5/images/prospr-6dpf-1-whole-segmented-VNC.xml deleted file mode 100644 index 356b29d..0000000 --- a/data/0.6.5/images/prospr-6dpf-1-whole-segmented-VNC.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.6.3/images/prospr-6dpf-1-whole-segmented-VNC.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - <ViewRegistrations> - <ViewRegistration setup="0" timepoint="0"> - <ViewTransform type="affine"> - 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</ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - <ViewRegistrations> - <ViewRegistration setup="0" timepoint="0"> - <ViewTransform type="affine"> - <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> - </ViewTransform> - </ViewRegistration> - </ViewRegistrations> -</SpimData> diff --git a/data/0.6.5/images/prospr-6dpf-1-whole-tlx-MED.xml b/data/0.6.5/images/prospr-6dpf-1-whole-tlx-MED.xml deleted file mode 100644 index 72b4613..0000000 --- a/data/0.6.5/images/prospr-6dpf-1-whole-tlx-MED.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.6.3/images/prospr-6dpf-1-whole-tlx-MED.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - <ViewRegistrations> - <ViewRegistration setup="0" timepoint="0"> - <ViewTransform type="affine"> - <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> - </ViewTransform> - </ViewRegistration> - </ViewRegistrations> -</SpimData> diff --git a/data/0.6.5/images/prospr-6dpf-1-whole-trk-MED.xml b/data/0.6.5/images/prospr-6dpf-1-whole-trk-MED.xml deleted file mode 100644 index 8cb7faf..0000000 --- a/data/0.6.5/images/prospr-6dpf-1-whole-trk-MED.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.6.3/images/prospr-6dpf-1-whole-trk-MED.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - <ViewRegistrations> - <ViewRegistration setup="0" timepoint="0"> - <ViewTransform type="affine"> - <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> - </ViewTransform> - </ViewRegistration> - </ViewRegistrations> -</SpimData> diff --git a/data/0.6.5/images/prospr-6dpf-1-whole-uncx-MED.xml b/data/0.6.5/images/prospr-6dpf-1-whole-uncx-MED.xml deleted file mode 100644 index 05bba21..0000000 --- a/data/0.6.5/images/prospr-6dpf-1-whole-uncx-MED.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.6.3/images/prospr-6dpf-1-whole-uncx-MED.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - <ViewRegistrations> - <ViewRegistration setup="0" timepoint="0"> - <ViewTransform type="affine"> - <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> - </ViewTransform> - </ViewRegistration> - </ViewRegistrations> -</SpimData> diff --git a/data/0.6.5/misc/bdv_server.txt b/data/0.6.5/misc/bdv_server.txt deleted file mode 100644 index bdf3047..0000000 --- a/data/0.6.5/misc/bdv_server.txt +++ /dev/null @@ -1,229 +0,0 @@ -sbem-6dpf-1-whole-raw ../images/sbem-6dpf-1-whole-raw.xml -sbem-6dpf-1-whole-mask-resin ../images/sbem-6dpf-1-whole-mask-resin.xml -sbem-6dpf-1-whole-mask-inside ../images/sbem-6dpf-1-whole-mask-inside.xml -sbem-6dpf-1-whole-mask-outside ../images/sbem-6dpf-1-whole-mask-outside.xml -prospr-6dpf-1-whole-ENR69-BCA1-MED ../images/prospr-6dpf-1-whole-ENR69-BCA1-MED.xml -prospr-6dpf-1-whole-AllCR2-MED ../images/prospr-6dpf-1-whole-AllCR2-MED.xml -prospr-6dpf-1-whole-ANPRB-MED ../images/prospr-6dpf-1-whole-ANPRB-MED.xml -prospr-6dpf-1-whole-Calmodulin-MED ../images/prospr-6dpf-1-whole-Calmodulin-MED.xml -prospr-6dpf-1-whole-ENR22-CO1A1-MED ../images/prospr-6dpf-1-whole-ENR22-CO1A1-MED.xml -prospr-6dpf-1-whole-ENR39-RPC2-MED ../images/prospr-6dpf-1-whole-ENR39-RPC2-MED.xml -prospr-6dpf-1-whole-ChAT-MED ../images/prospr-6dpf-1-whole-ChAT-MED.xml -prospr-6dpf-1-whole-Arx-MED ../images/prospr-6dpf-1-whole-Arx-MED.xml -prospr-6dpf-1-whole-Brn124-MED ../images/prospr-6dpf-1-whole-Brn124-MED.xml -prospr-6dpf-1-whole-ANPRA-MED ../images/prospr-6dpf-1-whole-ANPRA-MED.xml -prospr-6dpf-1-whole-Beta3-MED ../images/prospr-6dpf-1-whole-Beta3-MED.xml -prospr-6dpf-1-whole-DbhLike-MED ../images/prospr-6dpf-1-whole-DbhLike-MED.xml -prospr-6dpf-1-whole-Chx10-MED ../images/prospr-6dpf-1-whole-Chx10-MED.xml -prospr-6dpf-1-whole-AP2-MED ../images/prospr-6dpf-1-whole-AP2-MED.xml -prospr-6dpf-1-whole-ENR20-PPIB-MED ../images/prospr-6dpf-1-whole-ENR20-PPIB-MED.xml 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-sbem-6dpf-1-whole-segmented-chromatin-labels ../segmentations/sbem-6dpf-1-whole-segmented-chromatin-labels.xml -sbem-6dpf-1-whole-segmented-tissue-labels ../segmentations/sbem-6dpf-1-whole-segmented-tissue-labels.xml -sbem-6dpf-1-whole-segmented-muscle ../segmentations/sbem-6dpf-1-whole-segmented-muscle.xml -sbem-6dpf-1-whole-segmented-cells-labels ../segmentations/sbem-6dpf-1-whole-segmented-cells-labels.xml -sbem-6dpf-1-whole-segmented-nuclei-labels ../segmentations/sbem-6dpf-1-whole-segmented-nuclei-labels.xml -sbem-6dpf-1-whole-segmented-cilia-labels ../segmentations/sbem-6dpf-1-whole-segmented-cilia-labels.xml -sbem-6dpf-1-whole-segmented-ariande-neuropil ../segmentations/sbem-6dpf-1-whole-segmented-ariande-neuropil.xml -sbem-6dpf-1-whole-segmented-cats-neuropil ../segmentations/sbem-6dpf-1-whole-segmented-cats-neuropil.xml -prospr-6dpf-1-whole-virtual-cells-labels ../segmentations/prospr-6dpf-1-whole-virtual-cells-labels.xml diff --git a/data/0.6.5/segmentations/prospr-6dpf-1-whole-virtual-cells-labels.xml b/data/0.6.5/segmentations/prospr-6dpf-1-whole-virtual-cells-labels.xml deleted file mode 100644 index 9e8ba97..0000000 --- a/data/0.6.5/segmentations/prospr-6dpf-1-whole-virtual-cells-labels.xml +++ /dev/null @@ -1,39 +0,0 @@ -<SpimData version="0.2"> - <BasePath type="relative">.</BasePath> - <SequenceDescription> - <ImageLoader format="bdv.hdf5"> - <hdf5 type="relative">../../0.6.3/segmentations/prospr-6dpf-1-whole-virtual-cells-labels.h5</hdf5> - </ImageLoader> - <ViewSetups> - <Attributes name="channel"> - <Channel> - <id>0</id> - <name>0</name> - </Channel> - </Attributes> - <ViewSetup> - <id>0</id> - <name>Setup0</name> - <size>500 471 519</size> - <voxelSize> - <unit>micrometer</unit> - <size>0.55 0.55 0.55</size> - </voxelSize> - <attributes> - <channel>0</channel> - </attributes> - </ViewSetup> - </ViewSetups> - <Timepoints type="range"> - <first>0</first> - <last>0</last> - </Timepoints> - </SequenceDescription> - <ViewRegistrations> - <ViewRegistration setup="0" timepoint="0"> - <ViewTransform type="affine"> - <affine>0.55 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.0 0.55 0.0</affine> - </ViewTransform> - </ViewRegistration> - </ViewRegistrations> -</SpimData> -- GitLab