From da8424dc96a82e92db84142ac156778aa8c9ed5b Mon Sep 17 00:00:00 2001
From: Josep Moscardo <josep.moscardo@embl.de>
Date: Sat, 18 Jul 2020 01:13:59 +0200
Subject: [PATCH] try install seurat
---
packages.R | 3 ++-
1 file changed, 2 insertions(+), 1 deletion(-)
diff --git a/packages.R b/packages.R
index b2a5b8a..d9f45e7 100644
--- a/packages.R
+++ b/packages.R
@@ -22,7 +22,8 @@ install.packages("ggrepel")
install.packages("RColorBrewer")
install.packages("dplyr")
install.packages('Seurat')
-##devtools::install_github(repo = 'satijalab/seurat', ref = 'develop')
+# try install seurat Error in GetAssayData: could not find function "GetAssayData"
+devtools::install_github(repo = 'satijalab/seurat', ref = 'develop')
install.packages(c("sp", "polyclip"))
if (!requireNamespace("BiocManager", quietly = TRUE))
install.packages("BiocManager")
--
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