initial commit

README.rst

+Materials for Graphics
+######################
+
+:contributions: denes@ebi.ac.uk
+:issues: https://github.com/saezlab/graphix/issues
+
+This is a collection of handy stuff for making presentations, posters and figures.
+Some of these stuff have been made according to the EMBL style guidelines. 
+See the `branding guidlines`_ and `style guide`_ for more details. (I don't think it is better to follow this style, I am doing it just for fun.)
+
+.. _`branding guidlines`: http://intranet.ebi.ac.uk/sites/intranet.ebi.ac.uk/files/content/outreach/EMBL_branding_guidelines.pdf
+.. _`style guide`: http://intranet.ebi.ac.uk/outreach/writing-embl-style-guide
+
+What to find here?
+==================
+
+embl.gpl
+--------
+
+Palette of official EMBL colors in ``gpl`` RGB format. Copy to ``~/.config/inkscape/palettes/`` to use it in Inkscape. GIMP is able to import gpl palettes too. It has RGB 0-255 values in 3 columns, and color names. There are 5 colors (green, blue, yellow, red, black), each in 7 tones, plus the brown used often in titles on the webpage.
+
+colors.py
+---------
+
+Some methods for reading and converting colors.
+
+beamer_embl.tex
+---------------
+
+This is a presentation template for XeLaTeX and Beamer. Based on the PaloAlto template.
+
+embl1.pdf
+---------
+
+EMBL logo vector graphics.
+
+embl1.svg
+---------
+
+EMBL logo vector graphics.
+
+embl.svg
+--------
+
+EMBL logo with EMBL acronym.
+
+workflow2.svg
+
+fonts
+-----
+
+Without having these fonts, anything lacking embedded fonts (SVG and TeX) won't work for you.
+See also the `icon fonts`_ from EMBL.
+
+.. _`icon fonts`: http://intranet.ebi.ac.uk/outreach/fonts-and-icons
+
+workflow2.svg
+-------------
+
+Some simple, reusable graphic elements related to bioinformatics.
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beamer_embl.tex

+../Dokumentumok/pw/slides/beamer_embl.tex
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colors.py

+#!/usr/bin/env python2
+# -*- coding: utf-8 -*-
+
+#
+#  Copyright (c) 2014-2015 - EMBL-EBI
+#
+#  File author(s): Dénes Türei (denes@ebi.ac.uk)
+#
+#  Distributed under the GPLv3 License.
+#  See accompanying file LICENSE.txt or copy at
+#      http://www.gnu.org/licenses/gpl-3.0.html
+#
+#  Website: http://www.ebi.ac.uk/~denes
+#
+
+def embl_palette(inFile = 'embl_colors.tab'):
+    cols = []
+    with open(inFile, 'r') as f:
+        series = []
+        for i, l in enumerate(f):
+            l = [x.strip() for x in l.split(',')]
+            series.append(rgb2hex(tuple([256 * float(x) for x in l[0:3]])))
+            if len(series) == 7:
+                cols.append(series)
+                series = []
+    return cols
+
+# color converting functions
+def rgb2hex(rgb):
+    return '#%02x%02x%02x' % rgb
+
+def hex2rgb(self, rgbhex):
+    rgbhex = rgbhex.lstrip('#')
+    lv = len(rgbhex)
+    return tuple(int(rgbhex[i:i + 2], 16) for i in range(0, lv, 2))
+
+def rgb1(self, rgb256):
+    return rgb256 if not any([i > 1 for i in rgb256]) \
+        else tuple([x / float(255) for x in rgb256])
+
+def rgb256(rgb1):
+    return rgb1 if any([i > 1.0 for i in rgb1]) \
+        else tuple([x * 255.0 for x in rgb1])
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embl.gpl

+../Dokumentumok/embl.gpl
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embl.svg

+../Dokumentumok/pw/slides/embl.svg
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embl1.pdf

+../Dokumentumok/pw/slides/embl1.pdf
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embl1.svg

+../Dokumentumok/pw/slides/embl1.svg
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embl_colors.tab

+../Dokumentumok/pw/a2/src/bioigraph/data/embl_colors
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workflow2.svg

+../Dokumentumok/pw/slides/workflow2.svg
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