From 93e64c21a8c7b6834e06b3d1ee8168fc0f21f220 Mon Sep 17 00:00:00 2001
From: Sascha Meiers <meiers@embl.de>
Date: Thu, 11 Jan 2018 15:18:42 +0100
Subject: [PATCH] Remove sample name from config
---
Snake.config.json | 3 +--
1 file changed, 1 insertion(+), 2 deletions(-)
diff --git a/Snake.config.json b/Snake.config.json
index 04054eb..cb6269f 100644
--- a/Snake.config.json
+++ b/Snake.config.json
@@ -1,5 +1,4 @@
{
- "sample" : "D2Rfb",
"chromosomes" : ["chr1","chr2","chr3","chr4","chr5","chr6","chr7","chr8","chr9","chr10","chr11","chr12","chr13","chr14","chr15","chr16","chr17","chr18","chr19","chr20","chr21","chr22"],
"reference" : "/g/korbel/shared/datasets/refgenomes/human/hg19_chr1_22XYM.fa",
@@ -10,7 +9,7 @@
"samtools" : "samtools",
"bcftools" : "bcftools",
- "snv_calls" : "",
+ "snv_calls" : {},
"exclude_file" : "/g/korbel/meiers/tools/mosaicatcher/mosaicatcher/data/exclude/hg19.exclude",
"variable_bins" : {
--
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