diff --git a/Snakefile b/Snakefile index 7365e0186a82c8dc87071262fb78ab4a8152825a..8fca7bbb6239b409c5063c78a12566fd8f66fdd2 100644 --- a/Snakefile +++ b/Snakefile @@ -312,7 +312,7 @@ rule generate_exclude_file_1: output: temp("log/exclude_file.temp") input: - bam = expand("bam/{sample}/selected/{bam}.bam", sample = SAMPLES[0], bam = ALLBAMS_PER_SAMPLE[SAMPLES[0]][0]) + bam = expand("bam/{sample}/selected/{bam}.bam", sample = SAMPLES[0], bam = BAM_PER_SAMPLE[SAMPLES[0]][0]) log: "log/generate_exclude_file_1.log" params: