diff --git a/Snakefile b/Snakefile index 3c35f68c38de778bbba35b2dcd5ac200ccc0be43..e35572dd7ba5c40e7e1d2d3d6784d90d8b2e9439 100644 --- a/Snakefile +++ b/Snakefile @@ -36,10 +36,16 @@ METHODS = [ "simpleCalls_llr4_poppriorsTRUE_haplotagsFALSE_gtcutoff0_regfactor6", "simpleCalls_llr4_poppriorsTRUE_haplotagsFALSE_gtcutoff0.005_regfactor6", "simpleCalls_llr4_poppriorsTRUE_haplotagsFALSE_gtcutoff0.01_regfactor6", + "simpleCalls_llr4_poppriorsTRUE_haplotagsFALSE_gtcutoff0.02_regfactor6", + "simpleCalls_llr4_poppriorsTRUE_haplotagsFALSE_gtcutoff0.03_regfactor6", + "simpleCalls_llr4_poppriorsTRUE_haplotagsFALSE_gtcutoff0.04_regfactor6", "simpleCalls_llr4_poppriorsTRUE_haplotagsFALSE_gtcutoff0.05_regfactor6", "simpleCalls_llr4_poppriorsTRUE_haplotagsTRUE_gtcutoff0_regfactor6", "simpleCalls_llr4_poppriorsTRUE_haplotagsTRUE_gtcutoff0.005_regfactor6", "simpleCalls_llr4_poppriorsTRUE_haplotagsTRUE_gtcutoff0.01_regfactor6", + "simpleCalls_llr4_poppriorsTRUE_haplotagsTRUE_gtcutoff0.02_regfactor6", + "simpleCalls_llr4_poppriorsTRUE_haplotagsTRUE_gtcutoff0.03_regfactor6", + "simpleCalls_llr4_poppriorsTRUE_haplotagsTRUE_gtcutoff0.04_regfactor6", "simpleCalls_llr4_poppriorsTRUE_haplotagsTRUE_gtcutoff0.05_regfactor6", ]