From ff357ff1f6a2ea7696a7cbabb57e650b5497a3e3 Mon Sep 17 00:00:00 2001
From: Tobias Marschall <tobias.marschall@0ohm.net>
Date: Fri, 21 Sep 2018 16:38:22 +0200
Subject: [PATCH] Add some more GTCUTOFF parameters
---
Snakefile | 6 ++++++
1 file changed, 6 insertions(+)
diff --git a/Snakefile b/Snakefile
index 3c35f68..e35572d 100644
--- a/Snakefile
+++ b/Snakefile
@@ -36,10 +36,16 @@ METHODS = [
"simpleCalls_llr4_poppriorsTRUE_haplotagsFALSE_gtcutoff0_regfactor6",
"simpleCalls_llr4_poppriorsTRUE_haplotagsFALSE_gtcutoff0.005_regfactor6",
"simpleCalls_llr4_poppriorsTRUE_haplotagsFALSE_gtcutoff0.01_regfactor6",
+ "simpleCalls_llr4_poppriorsTRUE_haplotagsFALSE_gtcutoff0.02_regfactor6",
+ "simpleCalls_llr4_poppriorsTRUE_haplotagsFALSE_gtcutoff0.03_regfactor6",
+ "simpleCalls_llr4_poppriorsTRUE_haplotagsFALSE_gtcutoff0.04_regfactor6",
"simpleCalls_llr4_poppriorsTRUE_haplotagsFALSE_gtcutoff0.05_regfactor6",
"simpleCalls_llr4_poppriorsTRUE_haplotagsTRUE_gtcutoff0_regfactor6",
"simpleCalls_llr4_poppriorsTRUE_haplotagsTRUE_gtcutoff0.005_regfactor6",
"simpleCalls_llr4_poppriorsTRUE_haplotagsTRUE_gtcutoff0.01_regfactor6",
+ "simpleCalls_llr4_poppriorsTRUE_haplotagsTRUE_gtcutoff0.02_regfactor6",
+ "simpleCalls_llr4_poppriorsTRUE_haplotagsTRUE_gtcutoff0.03_regfactor6",
+ "simpleCalls_llr4_poppriorsTRUE_haplotagsTRUE_gtcutoff0.04_regfactor6",
"simpleCalls_llr4_poppriorsTRUE_haplotagsTRUE_gtcutoff0.05_regfactor6",
]
--
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