diff --git a/Snakefile b/Snakefile index 41f513a718add0714f92075b5e6887c0f0596a6b..ffaf9c4ffdc8226913bb1e460dd36cf4f7ccd0b2 100644 --- a/Snakefile +++ b/Snakefile @@ -728,7 +728,7 @@ rule create_haplotag_table: rule merge_haplotag_tables: input: - tsvs=lambda wc: ['haplotag/table/{}/by-cell/haplotag-counts.{}.{}.{}.tsv'.format(sample,cell,wc.windows,wc.bpdens) for cell in BAM_PER_SAMPLE[wc.sample]], + tsvs=lambda wc: ['haplotag/table/{}/by-cell/haplotag-counts.{}.{}.{}.tsv'.format(wc.sample,cell,wc.windows,wc.bpdens) for cell in BAM_PER_SAMPLE[wc.sample]], output: tsv='haplotag/table/{sample}/full/haplotag-counts.{windows}.{bpdens}.tsv' shell: