Skip to content
GitLab
Projects Groups Snippets
  • /
  • Help
    • Help
    • Support
    • Community forum
    • Submit feedback
    • Contribute to GitLab
  • Sign in
  • mypic mypic
  • Project information
    • Project information
    • Activity
    • Labels
    • Members
  • Repository
    • Repository
    • Files
    • Commits
    • Branches
    • Tags
    • Contributors
    • Graph
    • Compare
  • Issues 7
    • Issues 7
    • List
    • Boards
    • Service Desk
    • Milestones
  • Deployments
    • Deployments
    • Releases
  • Packages and registries
    • Packages and registries
    • Container Registry
  • Monitor
    • Monitor
    • Incidents
  • Analytics
    • Analytics
    • Value stream
    • Repository
  • Wiki
    • Wiki
  • Activity
  • Graph
  • Create a new issue
  • Commits
  • Issue Boards
Collapse sidebar
  • Ellenberg GroupEllenberg Group
  • mypicmypic
  • Wiki
  • AdaptiveFeedback

AdaptiveFeedback · Changes

Page history
Update AdaptiveFeedback authored Aug 27, 2017 by Antonio Politi's avatar Antonio Politi
Hide whitespace changes
Inline Side-by-side
AdaptiveFeedback.md
View page @ 29899c98
......@@ -26,7 +26,7 @@ The communication between the image analysis software is through the [windows re
## <a name= trigger></a> Trigger1 and Trigger2 pipelines
## [<img src="./images/up.PNG">](#back)<a name= trigger></a> Trigger1 and Trigger2 pipelines
The pipelines **Trigger1** or **Trigger2** are executed when the command ```trigger1``` or ```trigger2```, respectively, is received through the windows registry [**CodeMic**](#codemic). A typical workflow is a multi-position low-resolution imaging using the **Default** pipeline. When objects of interest are detected using online image analysis then the **Trigger1/2** pipeline is started with position(s) specified using the registry keys [**X, Y, Z**](#xyz). If no stage coordinates are specified imaging is performed at the current stage and focus position of the **Default** pipeline.
......@@ -47,7 +47,7 @@ Trigger1/2 pipelines | Explanations of the buttons
## <a name=adaptiveFeedback></a> Adaptive feedback workflows
## [<img src="./images/up.PNG">](#back) <a name=adaptiveFeedback></a> Adaptive feedback workflows
With adaptive feedback microscopy complex experiments can be performed. We provide here an example for high-throughout F(C)CS and imaging using the ImageJ/FiJi macro [Automated FCS](https://git.embl.de/politi/adaptive_feedback_mic_fiji).
......
Clone repository
  • AdaptiveFeedback
  • Home