This repository contains the Rmarkdowns and scripts to reproduce all the analyses contained in the paper 'Adaptive penalization in high-dimensional regression and classification with external covariates using variational Bayes'. In particular we provide scripts for the simulation example (simulation) and scalability assessment (run_time) as well as for the applications on the CLL study (CLL) and the GTEx data (GTEX). Additional helper files contain general functions for fitting and evaluation of various regression methods.
Britta Velten
authored
moved creation of data grid for simulation parameters from comments to an if-data-not-exists-statment
| Name | Last commit | Last update |
|---|---|---|
| CLL | ||
| CLL_std | ||
| GTEX | ||
| run_time | ||
| simulation | ||
| standardization | ||
| .gitignore | ||
| README.md | ||
| getFromSummary.R | ||
| mygrridge.R | ||
| session_info.txt | ||
| util_defs.R | ||
| utils.R | ||
| utils_eval.R |