a suite to handle barcoded fastq files with (or without) Unique Molecule Identifiers (UMIs) and filter read duplicates using these UMIs

Snakemake biological workflow management tutorial

Introduction to Python course materials

EMBL Python User Group

UI for the Lab DataWareHouse Tool

Bio-IT Linux Commandline courses

PROOF OF CONCEPT: a Python client for the high-level DMA API.

Materials for a course on statistical methods in bioinformatics

Source code for "Genome-wide quantification of differential transcription factor activity: diffTF"

Dynamic genome browsing

Materials relating to the EMBL Bio-IT course on Scientific Data Management.

Materials for a Bio-IT Workshop on Regular Expressions

Spherical harmonic (A_lm) representations of scattering amplitude, using GPU computation

Clean repository for the working version of SIAMCAT.