GitLab

Bio-IT Linux Commandline courses

EMBL Python User Group

Introduction to Python course materials

a suite to handle barcoded fastq files with (or without) Unique Molecule Identifiers (UMIs) and filter read duplicates using these UMIs

Snakemake biological workflow management tutorial

UI for the Lab DataWareHouse Tool

Materials relating to the EMBL Bio-IT course on Scientific Data Management.

Dynamic genome browsing

Materials for a course on statistical methods in bioinformatics

Source code for "Genome-wide quantification of differential transcription factor activity: diffTF"

Clean repository for the working version of SIAMCAT.

Materials for a Bio-IT Workshop on Regular Expressions

Spherical harmonic (A_lm) representations of scattering amplitude, using GPU computation

a tool to compute drug enrichnment