a suite to handle barcoded fastq files with (or without) Unique Molecule Identifiers (UMIs) and filter read duplicates using these UMIs

Snakemake biological workflow management tutorial

UI for the Lab DataWareHouse Tool

Bio-IT Linux Commandline courses

Dynamic genome browsing

Materials for a course on statistical methods in bioinformatics

EMBL 2018 Course Analysis and Integration of Transcriptome and Proteome Data

Materials relating to the EMBL Bio-IT course on Scientific Data Management.

EMBL Python User Group

Introduction to Python course materials

Materials for a Bio-IT Workshop on Regular Expressions

Spherical harmonic (A_lm) representations of scattering amplitude, using GPU computation

a tool to compute drug enrichnment

Data handling and graphics in R

A metagenomic SNV calling pipeline

Materials for the Bio-IT "Image Processing with Python" course. Materials have been adapted from those originally forked from Karin Sasaki's GitHub repo.