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Zaugg Group
SUMseq
Issues
Open
11
Closed
61
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72
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Title
Issue
Merged fragment files?
#70
·
created
4 months ago
by
Jonas Rauchhaus
updated 1 week ago
Issue
Additional QC plots
#69
·
created
5 months ago
by
Evi Vlachou
Issue
Check container for ATAC: bcl-convert
#66
·
created
5 months ago
by
Christian Arnold
ATAC preprocessing + QC
bug
Issue
Optionally provide a rule for ATAC to demulitplex by sample
#64
·
created
5 months ago
by
Christian Arnold
ATAC preprocessing + QC
Low priority
New feature
updated 5 months ago
Issue
Clarify mapping statistics
#62
·
created
7 months ago
by
Maksim Kholmatov
RNA preprocessing + QC
Implemented
Low priority
updated 5 months ago
Issue
Check barcodes againt whitelist
#60
·
created
8 months ago
by
Christian Arnold
ATAC+RNA modality integration and QC
New feature
updated 5 months ago
Issue
hg38_mm10 genome integration
#59
·
created
8 months ago
by
Christian Arnold
ATAC preprocessing + QC
Low priority
New feature
updated 5 months ago
Issue
RNA: Combine samples for Seurat
#52
·
created
8 months ago
by
Christian Arnold
RNA preprocessing + QC
updated 5 months ago
Issue
Demultiplex by I1
#50
·
created
9 months ago
by
Christian Arnold
RNA preprocessing + QC
Low priority
New feature
updated 5 months ago
Issue
RNA: Heatmap rule
#48
·
created
1 year ago
by
Christian Arnold
RNA preprocessing + QC
updated 5 months ago
Issue
Thresholds and implementation for cell calling and filters
#20
·
created
1 year ago
by
Christian Arnold
updated 5 months ago
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