Explore projects

R package to read, register and compare point sets from single molecule localization microscopy.

Extends the Rarr package to deal with images in ome-zarr format.

A NumPy port of the foldseek code for encoding protein structures to 3di.

Centre for Bioimage Analysis

Krim Anlas - Trivedi lab;

Nicola Gritti - MIF

Keywords: bioimage analysis, support, MIF, python, matlab, TGMM, gastruloids, TGMM, tracking

Demo of a Poissonian Cellular-Potts model

Physicochemical properties and indices for amino-acid sequences (ported from R).

GRaNIE R package for building eGRNs