Explore projects
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Laura Bianchi - Ruprecht lab (CRG)
Gopi Shah - MIF
Nicola Gritti - MIF
Keywords: Luxendo, MuVi SPIM, python, cellpose, apoptosis, segmentation, tracking, support, external, bioimage analysis, zebrafish
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Zimmermann-Kogadeeva Group / PlottingOnGenome
MIT LicenseUpdated -
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Zimmermann-Kogadeeva Group / GEMsembler
MIT LicenseGEMsembler tool for assembling and comparing several types of Genome-Scale Metabolic Models (GEMs)
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Martin Larralde / NAF codec
MIT LicenseRust coder/decoder for Nucleotide Archive Format (NAF) files.
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Kosinski group / alphafold_howto
GNU General Public License v3.0 or laterNotes and SLURM templates for using AlphaFold and related tools on the EMBL HD cluser
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Martin Schorb / py-EM
GNU General Public License v3.0 onlyUpdated -
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Martin Larralde / Pyrodigal
GNU General Public License v3.0 onlyPython interface to Prodigal, an ORF finder for genomes, progenomes and metagenomes.
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Martin Larralde / gb-io.py
MIT LicenseA Python interface to gb-io, a fast GenBank parser and serializer written in Rust.
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Roman Belousov / dycpm
Creative Commons Attribution 4.0 InternationalDemo of a Poissonian Cellular-Potts model
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Zaugg Group / ATAC-Seq_course_2024
MIT LicenseUpdated -
Martin Larralde / Software Engineering
Creative Commons Attribution Non Commercial Share Alike 4.0 InternationalUpdated