Additional tool is needed for splitting image containing multiple tissue slices
In some cases multiple smaller tissue slices are placed in the same well. To simplify acquisition protocol, entire well is acquired and stitched as one tilescan image.
The analysis protocol implemented before, expects image files containing individual tissue slices as an input. In order to perform the same analysis with image data containing multiple tissue slices in image file, additional script is needed to split each image file into multiple image files containing individual tissue slices.