Meaning of Warnings
In the output, I see the following output / warnings:
WARN [2022-08-01 17:48:41] In this version, the GRN should be filtered before
WARN [2022-08-01 17:48:41] Both DE data and GRN should contain ENSEMBL ID for the Genes
What does it mean exactly? Why this is a warning, how GRaNPA can detect whether it is a filtered or unfiltered network? What is the consequence of not having Ensembl IDs for both DE and the GRN?