... | ... | @@ -54,12 +54,12 @@ R packages used by the IDE require the following libraries: libssl, liblzma, lib |
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### R packages
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The IDE requires some R packages and will try to install them if it can't detect them on the system. In case of problems, it may be better to install the required packages manually. Note that package installation can take several minutes depending on how many dependencies are already present on the system.
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The IDE requires the following packages from CRAN: devtools, data.table, DT, shiny, shinyFiles, shinycssloaders, shinydashboard, shinyjs, shinyWidgets, shinybusy, assertthat, ggplot2, plotly, RANN, MASS, dbscan, uwot, xgboost, Ckmeans.1d.dp, e1071, caret, RColorBrewer, aws.s3.
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The IDE requires the following packages from CRAN: devtools, data.table, DT, shiny, shinyFiles, shinycssloaders, shinydashboard, shinyjs, shinyWidgets, shinybusy, assertthat, ggplot2, plotly, RANN, MASS, dbscan, uwot, xgboost, Ckmeans.1d.dp, e1071, caret, RColorBrewer, aws.s3, configr.
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From within an R console, install with:
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```
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install.packages(c("devtools", "data.table", "DT", "shiny", "shinyFiles", "shinycssloaders", "shinydashboard", "shinyjs", "shinyWidgets", "shinybusy", "assertthat", "ggplot2", "plotly", "RANN", "MASS", "dbscan", "uwot", "xgboost", "Ckmeans.1d.dp", "e1071", "caret", "RColorBrewer", "aws.s3"))
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install.packages(c("devtools", "data.table", "DT", "shiny", "shinyFiles", "shinycssloaders", "shinydashboard", "shinyjs", "shinyWidgets", "shinybusy", "assertthat", "ggplot2", "plotly", "RANN", "MASS", "dbscan", "uwot", "xgboost", "Ckmeans.1d.dp", "e1071", "caret", "RColorBrewer", "aws.s3", "configr"))
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```
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and from Bioconductor: EBImage and RBioFormats
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