... | @@ -4,12 +4,12 @@ |
... | @@ -4,12 +4,12 @@ |
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Requires `sparx` , `EMAN2` , (`mpi4py`)
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Requires `sparx` , `EMAN2` , (`mpi4py`)
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```
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```
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*** Computes contrast-enhanced cryo-EM potential maps by local amplitude scaling ***
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usage: locscale.py [-h] -em EM_MAP -mm MODEL_MAP -p APIX [-ma MASK]
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usage: locscale.py [-h] -em EM_MAP -mm MODEL_MAP -p APIX [-ma MASK]
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[-w WINDOW_SIZE] -o OUTFILE [-mpi]
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[-w WINDOW_SIZE] -o OUTFILE [-mpi]
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*** Performs local amplitude scaling against atomic reference ***
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optional arguments:
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Optional arguments:
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-h, --help show this help message and exit
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-h, --help show this help message and exit
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-em EM_MAP, --em_map EM_MAP
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-em EM_MAP, --em_map EM_MAP
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Input filename EM map
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Input filename EM map
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... | @@ -23,7 +23,7 @@ Optional arguments: |
... | @@ -23,7 +23,7 @@ Optional arguments: |
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-o OUTFILE, --outfile OUTFILE
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-o OUTFILE, --outfile OUTFILE
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Output filename
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Output filename
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-mpi, --mpi MPI version call by: "mpirun -np 4 python locscale.py
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-mpi, --mpi MPI version call by: "mpirun -np 4 python locscale.py
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-em map1.mrc -mm map2.mrc -ma mask.mrc -p 1.0 -w 10
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-em emmap.mrc -mm modmap.mrc -ma mask.mrc -p 1.0 -w 10
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-mpi -o scaled.mrc"
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-mpi -o scaled.mrc"
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```
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```
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