Merge branch 'submission' into 'main'

deeptools last version

See merge request !12

.gitlab-ci.yml

@@ -37,6 +37,14 @@ image:
 ## WRITE YOUR TEST RULE HERE AFTER BRANCHING ON SUBMISSION AND CREATE A MERGE REQUEST
 
 
+deeptools-351-test:
+  extends: .templateTest
+  variables:
+    BASENAME: deeptools
+    TAG: 351
+    RECIPE_PATH: recipes/analysis-suites/deeptools
+
+
 #####################
 # Image analysis
 #####################

recipes/analysis-suites/deeptools/Singularity.deeptools-351

+Bootstrap: docker
+From: ubuntu:focal
+ 
+%help
+    This singularity install deeptools
+
+%post
+
+    # ~~~~~~ General setup and folder creation ~~~~~~ #
+    
+    apt-get update && apt-get install -y wget bzip2
+    
+    # ~~~~~ MINICONDA 3.4.0.5 ~~~~~ #
+    wget https://repo.anaconda.com/miniconda/Miniconda3-4.7.12.1-Linux-x86_64.sh && \
+    bash Miniconda3-4.7.12.1-Linux-x86_64.sh -b -p /conda && \
+    rm -f Miniconda3-4.7.12.1-Linux-x86_64.sh
+    export PATH="/conda/bin:${PATH}"
+       
+    # ~~~~~ deeptools v3.5.1 ~~~~~ #
+    conda install -c bioconda deeptools=3.5.1
+    
+%environment
+    export PATH="${PATH}:/conda/bin"
+
+%labels
+    Author Nicolas Descostes
+    Version v0.0.1