replace by main

.gitlab-ci.yml

@@ -36,14 +36,6 @@ image:
 
 ## WRITE YOUR TEST RULE HERE AFTER BRANCHING ON SUBMISSION AND CREATE A MERGE REQUEST
 
-
-parallelfastqdump-063-test:
-  extends: .templateTest
-  variables:
-    BASENAME: parallelfastqdump
-    TAG: v063
-    RECIPE_PATH: recipes/fastq-operations/parallelfastqdump
-
 #####################
 ## Include
 #####################
@@ -55,6 +47,11 @@ include:
   #####################
   - local: "yaml-files/quality-control/fastqc-deploy.yaml"
 
+  #####################
+  # fastq operations
+  #####################
+  - local: "yaml-files/fastq-operations/parallelfastqdump-deploy.yaml"
+
   #####################
   # Analysis suites
   #####################

recipes/fastq-operations/parallelfastqdump/Singularity.parallelfastqdump-v063

@@ -25,4 +25,3 @@ From: ubuntu:bionic
 %labels
     Author Nicolas Descostes
     Version v0.0.2
-

yaml-files/fastq-operations/parallelfastqdump-deploy.yaml

+parallelfastqdump-063-builddeploy:
+  extends: .templateBuildDeploy
+  variables:
+    BASENAME: parallelfastqdump
+    TAG: v063
+    RECIPE_PATH: recipes/fastq-operations/parallelfastqdump
+  only:
+    changes:
+      - recipes/fastq-operations/parallelfastqdump/Singularity.parallelfastqdump-v063

yaml-files/fastq-operations/parallelfastqdump-test.backup

+parallelfastqdump-063-test:
+  extends: .templateTest
+  variables:
+    BASENAME: parallelfastqdump
+    TAG: v063
+    RECIPE_PATH: recipes/fastq-operations/parallelfastqdump