Merge branch 'submission' into 'main'

test manual

See merge request !6

.gitlab-ci.yml

@@ -31,7 +31,7 @@ image:
     - singularity push --docker-username gitlab-ci-token --docker-password $CI_JOB_TOKEN container.sif oras://"$CI_REGISTRY_IMAGE"/$BASENAME:$TAG
 
 #####################
-## Quality control
+## Submission area
 #####################
 
 
@@ -42,6 +42,12 @@ image:
 #    TAG: 0119cv7
 #    RECIPE_PATH: recipes/quality-control/fastqc/
 
+
+
+#####################
+## Quality control
+#####################
+
 fastqc-0119cv7-builddeploy:
   extends: .templateBuildDeploy
   variables:
@@ -51,3 +57,4 @@ fastqc-0119cv7-builddeploy:
   only:
     changes:
       - recipes/quality-control/fastqc/Singularity.fastqc-0119cv7
+

recipes/quality-control/fastqc/Singularity.fastqc-0119cv8

+Bootstrap: docker
+From: biocontainers/fastqc:v0.11.9_cv8
+
+%runscript
+    echo "Running container biocontainers/fastqc:v0.11.9_cv8, FastQC v0.11.9"
+    exec /bin/bash "$@"
+
+%post
+    mkdir /cluster /work /tsd /projects
+
+%labels
+    Author Nicolas Descostes