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Kosinski group / pyxlinks
GNU General Public License v3.0 or laterA Python package for dealing with cross-linking/MS data
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Martin Larralde / PytrimAl
GNU General Public License v3.0 onlyCython bindings and Python interface to trimAl, a tool for automated alignment trimming.
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Materials for the Bio-IT "Image Processing with Python" course. Materials have been adapted from those originally forked from Karin Sasaki's GitHub repo.
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Martin Larralde / PySWRD
GNU General Public License v3.0 onlyCython bindings and Python interface to SWORD (Smith Waterman On Reduced Database), a method for fast database search.
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Martin Larralde / Pyskani
MIT LicensePyO3 bindings and Python interface to skani, a method for fast fast genomic identity calculation using sparse chaining.
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Martin Larralde / Pyrodigal
GNU General Public License v3.0 onlyPython interface to Prodigal, an ORF finder for genomes, progenomes and metagenomes.
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Martin Larralde / PyFastANI
MIT LicenseCython bindings and Python interface to FastANI, a method for fast whole-genome similarity estimation.
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Martin Schorb / py-EM
GNU General Public License v3.0 onlyUpdated -
Scripts associated with the paper "Disentangling the impact of genetic and environmental factors on the proteotypes across individuals"
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Holger Dinkel / proteomics-scripts
Creative Commons Attribution Non Commercial Share Alike 3.0 UnportedCollection of scripts to help with proteomics data analysis
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Arendt Group / prospr-dash
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Bartosz Jan Bartmanski / PoolingScheme
MIT LicenseUpdated -
Zimmermann-Kogadeeva Group / PlottingOnGenome
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