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Genetic Interactions Screen on Lipid Levels
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ALMF
Genetic Interactions Screen on Lipid Levels
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aae98bfbf4ecf0b4e0d9dceeed7478b208ce9bcf
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ext-yunfeng.huang-master-patch-15596
ext-yunfeng.huang-master-patch-95019
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secondary screen replicate III step II
master
master
stepI script for the replicateII formatting (secondary screen)
dealing with the output path
accounting for swapped gene and siRNA tags in one of replicates; cleaning the code
merging information about gene IDs
final formatting of replicates 1 and II of the secondary screen
formatting changes
reanming script for the replicates I and II
copying image fiels
function for getting new treatment tag
monitoring position folders
merge
minor
working on the script for secondary screen formatting
script for preparing primary screen for IDR
add summary plot for interaction values and Zscores
Merge branch 'ext-yunfeng.huang-master-patch-15596' into 'master'
Update README.md
ext-yunfeng.hua…
ext-yunfeng.huang-master-patch-15596
links to the rscripts from the readme
Update of the main readme
updating readme for CoRNAi
update readme for CoRNAi data
updating gitignore to exclude output plots from the repo
adding README for CoRNAi
renaming coRNAi plots scripts
cleaning script for boxblots
removing unused packages
cleaning primary screen analysis script - obsolete plots and tables
renaming scripts for RNAi analysis
delete changelog
Merge branch 'ext-yunfeng.huang-master-patch-95019' into 'master'
Add new file - LICENSE
ext-yunfeng.hua…
ext-yunfeng.huang-master-patch-95019
Update README
Upload New File - README for UKBB analysis scripts
Merge branch 'ext-yunfeng.huang-master-patch-95019' into 'master'
Upload New File - Stratified analysis for LPL PTV-burden on gain-of-function variant S447Ter
Upload New File - R code for interaction analysis on PTV-burden with PRS for lipids in the UKBB
Upload New File - R code for pairwise gene-gene interaction analysis on PTV-burden with lead GWAS SNP for lipids in the UKBB
Upload New File - R code for pairwise gene-gene interaction analysis on lead GWAS SNP for lipids and CAD in the UKBB
Upload New File - R code for pairwise gene-gene interaction analysis on PTV-burden for lipids in the UKBB
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