Changed label in existing project file

extensions/chaeo/examples/transfer_labels_to_ilastik_object_classifier.py

+from pathlib import Path
+import h5py
+import ilastik.applets.objectClassification
+import pandas as pd
+
+from extensions.ilastik.models import IlastikObjectClassifierModel
+
+def transfer_labels_to_ilastik_ilp(ilp, df_stack_meta):
+
+    with h5py.File(ilp, 'r+') as h5:
+        ts = h5['ObjectClassification']['LabelInputs']['0000']
+        for ti in ts.items():
+            idx = int(ti[0])
+            ds = ti[1]
+            la_old = ds[1]
+            ds[1] = float(df_stack_meta.loc[df_stack_meta.zi == idx, 'annotation_class_id'].iat[0])
+            print(f'Changed label {ti} from {la_old} to {ds[1]}')
+
+if __name__ == '__main__':
+    ilp = 'c:/Users/rhodes/model-server/ilastik/test_automate_obj_labels.ilp'
+    df = pd.read_csv(
+        'c:/Users/rhodes/projects/proj0011-plankton-seg/exp0009/output/labeled_patches-20231013-0022/training_stack.csv'
+    )
+    transfer_labels_to_ilastik_ilp(ilp, df)
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