Commits · 19261090ca52d37b8f00c79ebed96ae9a1d347ee · ALMF / SVLT · GitLab

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Sep 12, 2024
- Implemented segmentation IOU · 19261090
  Christopher Randolph Rhodes authored 6 months ago
  
  19261090
- Implemented bounding box intersection metric · 88cd7cae
  Christopher Randolph Rhodes authored 6 months ago
  
  88cd7cae
Sep 06, 2024
- Successful test of multi-set bbox overlap · f7037423
  Christopher Randolph Rhodes authored 6 months ago
  
  f7037423
Sep 03, 2024
- Roughed in optional to compare overlaps between two DataFrames, pathway to... · e8a8428b
  Christopher Randolph Rhodes authored 6 months ago
  
  Roughed in optional to compare overlaps between two DataFrames, pathway to transferring classification labels
  e8a8428b
Aug 02, 2024
- Overlap tests pass; getting pandas warning · b51fec7e
  Christopher Randolph Rhodes authored 7 months ago
  
  b51fec7e
- filter_df_overlap_bbox now includes both sides of an overlapping Roi pair as separate rows · 1de55e7c
  Christopher Randolph Rhodes authored 7 months ago
  
  1de55e7c
- filter_df_overlap_bbox does not include "second" ROI in index so can be incomplete · 1de38621
  Christopher Randolph Rhodes authored 7 months ago
  
  1de38621
Aug 01, 2024
- Implemented and tested creation of RoiSet from polygon coordinates · 799f2ea5
  Christopher Randolph Rhodes authored 7 months ago
  
  799f2ea5
- Docstring and assertion in polymer fit · c6656826
  Christopher Randolph Rhodes authored 7 months ago
  
  c6656826
- Removed additional cases where accessor data was sliced directly · c87d3bb1
  Christopher Randolph Rhodes authored 7 months ago
  
  c87d3bb1
- Test cover use .data_xy and .data_xyz properties · 75dca594
  Christopher Randolph Rhodes authored 7 months ago
  
  75dca594
Jul 31, 2024
- Implemented polygon fitting · 531fac85
  Christopher Randolph Rhodes authored 7 months ago
  
  531fac85
Jul 18, 2024
- Untested create from Bounding boxes · b257dfe4
  Christopher Randolph Rhodes authored 8 months ago
  
  b257dfe4
Jul 17, 2024
- Added docstring · 978adaf9
  Christopher Randolph Rhodes authored 8 months ago
  
  978adaf9
- Object classification and object map creation are now separate functions; no... · 6f12d7e9
  Christopher Randolph Rhodes authored 8 months ago
  
  Object classification and object map creation are now separate functions; no longer persist object maps.
  6f12d7e9
- Removed focal point projection · 2c7493d6
  Christopher Randolph Rhodes authored 8 months ago
  
  2c7493d6
- Changed names of static methods · 03e748c1
  Christopher Randolph Rhodes authored 8 months ago
  
  03e748c1
- Tests pass, code is still ugly · 1124e5a0
  Christopher Randolph Rhodes authored 8 months ago
  
  1124e5a0
- Accidentally not taking mask MIP · 51339418
  Christopher Randolph Rhodes authored 8 months ago
  
  51339418
Jul 16, 2024
- Need to standardize whether binary_mask is (Y, X, 1, 1) or (Y, X) · 8e56b0e6
  Christopher Randolph Rhodes authored 8 months ago
  
  8e56b0e6
- Generally removing necessity of instantiating with a map of object IDs · 8ecc14be
  Christopher Randolph Rhodes authored 8 months ago
  
  8ecc14be
- Renamed dataframe maker and moved derivative dataframe columns into separate method · b4693d69
  Christopher Randolph Rhodes authored 8 months ago
  
  b4693d69
- Removed image-flattening from focal points · 3bf6161c
  Christopher Randolph Rhodes authored 8 months ago
  
  3bf6161c
Jul 15, 2024
- Implemented logic to find overlapping bounding boxes · 83259e77
  Christopher Randolph Rhodes authored 8 months ago
  
  83259e77
- Renamed static generator function · dc1b5e08
  Christopher Randolph Rhodes authored 8 months ago
  
  dc1b5e08
Jul 01, 2024
- Migrating to relative imports · 106e519a
  Christopher Randolph Rhodes authored 8 months ago
  
  106e519a
Jun 24, 2024
- Removed model_server. prefix from imports · 489fa02d
  Christopher Randolph Rhodes authored 9 months ago
  
  489fa02d
Jun 06, 2024
- Started looping over stack's z-levels to implement COCO-compliant data export · f18af398
  Christopher Randolph Rhodes authored 9 months ago
  
  f18af398
Jun 03, 2024
- _derived_accessor() method now sets class of accessor that apply() returns · 42c609f7
  Christopher Randolph Rhodes authored 9 months ago
  
  42c609f7
- Renamed get_one_channel_data to get_mono · 03786d14
  Christopher Randolph Rhodes authored 9 months ago
  
  03786d14
- RoiSet can now return and export two-channel images as both TIFs and PNGs · 655fbb62
  Christopher Randolph Rhodes authored 9 months ago
  
  655fbb62
- Can handle and export arbitrary multi-channel patches · 952379b5
  Christopher Randolph Rhodes authored 9 months ago
  
  952379b5
- Fixed underlying error when constructing RoiSets with no objects · 9c0dbc62
  Christopher Randolph Rhodes authored 9 months ago
  
  9c0dbc62
May 08, 2024
- Specify connectivity of labeling · e2d864b6
  Christopher Randolph Rhodes authored 10 months ago
  
  e2d864b6
May 07, 2024
- Allow None to certain int parameters · 4b8721ca
  Christopher Randolph Rhodes authored 10 months ago
  
  4b8721ca
May 03, 2024
- Added static constructor for making RoiSets from segmentation masks · 426b5b79
  Christopher Randolph Rhodes authored 10 months ago
  
  426b5b79
Apr 11, 2024
- Method to export derived channels as patch stacks · 5cdfcf06
  Christopher Randolph Rhodes authored 11 months ago
  
  5cdfcf06
- Added doc string to explain callables for derived channels · 76f7ceed
  Christopher Randolph Rhodes authored 11 months ago
  
  76f7ceed
- Pass function handles to add derived classes to object classification · ddb9b416
  Christopher Randolph Rhodes authored 11 months ago
  
  ddb9b416
- Create new accessor for given channels · 9f82d6fd
  Christopher Randolph Rhodes authored 11 months ago
  
  9f82d6fd