Commits · ef31604c4d986dd8d9550490236979e92a13b945 · ALMF / SVLT

Oct 25, 2024
- ilastik and pipeline tests now all use TestServer request assertions · ef31604c
  Christopher Randolph Rhodes authored 5 months ago
  
  ef31604c
- Pass optional model ID to ilastik models · c7485174
  Christopher Randolph Rhodes authored 5 months ago
  
  c7485174
- Incomplete, but replacing manual status code assertions with assertion methods... · 92b2a71c
  Christopher Randolph Rhodes authored 5 months ago
  
  Incomplete, but replacing manual status code assertions with assertion methods of TestServerBaseClass
  92b2a71c
Sep 23, 2024
- Repaired a few things that were causing ilastik test failures · 71ce1f57
  Christopher Randolph Rhodes authored 6 months ago
  
  71ce1f57
Aug 15, 2024
- Implemented hierarchical routing · dce34bcf
  Christopher Randolph Rhodes authored 7 months ago
  
  dce34bcf
- Renamed ._unique to .unique · ddb55f55
  Christopher Randolph Rhodes authored 7 months ago
  
  ddb55f55
Aug 13, 2024
- Consolidated some recurring steps in API testing · 24ab120e
  Christopher Randolph Rhodes authored 7 months ago
  
  24ab120e
Aug 12, 2024
- Can read accessor from file with name in path itself · 58f2e40f
  Christopher Randolph Rhodes authored 7 months ago
  
  58f2e40f
- ilastik tests pass · d166583b
  Christopher Randolph Rhodes authored 7 months ago
  
  d166583b
- Test passes on ilastik pipeline · 2ec75e0b
  Christopher Randolph Rhodes authored 7 months ago
  
  2ec75e0b
- Still adapting ilastik pipeline test · f9191561
  Christopher Randolph Rhodes authored 7 months ago
  
  f9191561
Aug 08, 2024
- Option to specify model ID · 20e3a20e
  Christopher Randolph Rhodes authored 7 months ago
  
  20e3a20e
- Confirmed ilastik pipeline runs with new module format · 8bf70444
  Christopher Randolph Rhodes authored 7 months ago
  
  8bf70444
Aug 07, 2024
- Merged in RoiSet polygon logic so far from YOLO dev branch · ebaf5ac1
  Christopher Randolph Rhodes authored 7 months ago
  
  ebaf5ac1
Aug 05, 2024
- Last commit misplaced ilastik tests; these now all pass · cf493168
  Christopher Randolph Rhodes authored 7 months ago
  
  cf493168
- In the middle of restoring dummy tests, now declared within testing modules themselves · 1696fbee
  Christopher Randolph Rhodes authored 7 months ago
  
  1696fbee
Jul 17, 2024
- Changed names of static methods · 03e748c1
  Christopher Randolph Rhodes authored 8 months ago
  
  03e748c1
Jul 05, 2024
- Confirmed ilastik tests pass with new test data module · bbd7c2cd
  Christopher Randolph Rhodes authored 8 months ago
  
  bbd7c2cd
- Moved test configuration to its own module · d8661a0d
  Christopher Randolph Rhodes authored 8 months ago
  
  d8661a0d
- base.util implements test data loading method · 1387df21
  Christopher Randolph Rhodes authored 8 months ago
  
  1387df21
- Test base classes now in base.util, not test package · b5f4a003
  Christopher Randolph Rhodes authored 8 months ago
  
  b5f4a003
- Split base and ilastik tests, parse directories from environmental variables · 5a49ef0d
  Christopher Randolph Rhodes authored 8 months ago
  
  5a49ef0d
Jul 03, 2024
- Still trying to quiet ilastik and its dependencies on main log · 38c11c24
  Christopher Randolph Rhodes authored 8 months ago
  
  38c11c24
- Relative imports was causing problems in debugger · 37a09ce4
  Christopher Randolph Rhodes authored 8 months ago
  
  37a09ce4
- Moved test configuration into tests folder · 3a91b12c
  Christopher Randolph Rhodes authored 8 months ago
  
  3a91b12c
Jul 01, 2024
- Move ilastik tests into same test directory · 006a60b9
  Christopher Randolph Rhodes authored 8 months ago
  
  006a60b9
Jun 06, 2024
- Removed test of load_model with different path formats · 87146409
  Christopher Randolph Rhodes authored 9 months ago
  
  87146409
- Testing inference time, probably not a great idea... · 16927ba9
  Christopher Randolph Rhodes authored 9 months ago
  
  16927ba9
Jun 03, 2024
- Renamed get_one_channel_data to get_mono · 03786d14
  Christopher Randolph Rhodes authored 9 months ago
  
  03786d14
- Removed test for handling multiple object labels in a patch, now that... · 1e4090f3
  Christopher Randolph Rhodes authored 9 months ago
  
  Removed test for handling multiple object labels in a patch, now that underlying cause of this problem has been fixed
  1e4090f3
May 22, 2024
- ilastik model loading now takes duplicate in request body · 1ab12cb8
  Christopher Randolph Rhodes authored 10 months ago
  
  1ab12cb8
May 06, 2024
- Expose gaussian blur in ilastik segmentation model · cb77c5f9
  Christopher Randolph Rhodes authored 10 months ago
  
  cb77c5f9
- ilastik load endpoints now use Pydyantic models · fff8a36f
  Christopher Randolph Rhodes authored 10 months ago
  
  fff8a36f
Apr 26, 2024
- Removed in-progress RoiSet test · 2310314b
  Christopher Randolph Rhodes authored 11 months ago
  
  2310314b
- ilastik workflow now interprets channel=None to use all input channels · 9db2ea50
  Christopher Randolph Rhodes authored 11 months ago
  
  9db2ea50
- ilastik workflow now interprets channel=None to use all input channels · ff6547b2
  Christopher Randolph Rhodes authored 11 months ago
  
  ff6547b2
- Test coverage of ilastik workflow and API endpoint that currently restricts multichannel inputs · b9037651
  Christopher Randolph Rhodes authored 11 months ago
  
  b9037651
- Confirms that ilastik pixel object already works with multichannel input · 9a811694
  Christopher Randolph Rhodes authored 11 months ago
  
  9a811694
- Confirms that ilastik pixel classification already works with multichannel input · 0bd3a302
  Christopher Randolph Rhodes authored 11 months ago
  
  0bd3a302
Apr 17, 2024

Disabled generation of ilastik object model that receives segmentation masks... · e2b759e4

Christopher Randolph Rhodes authored 11 months ago

Disabled generation of ilastik object model that receives segmentation masks from one that receives pixel probabilities; this was causing inaccurate results

e2b759e4