Commits · f7537a42dae06fcd1c7c7b11483afe0dfc695de0 · ALMF / SVLT · GitLab

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Nov 02, 2023
- Merge in ilastik API support for segmentation-to-object workflow · f7537a42
  Christopher Randolph Rhodes authored 1 year ago
  
  f7537a42
Oct 31, 2023
- Merge in path-changing API · 9a2a8a5c
  Christopher Randolph Rhodes authored 1 year ago
  
  9a2a8a5c
- Merge in path-change API · d2ea41f9
  Christopher Randolph Rhodes authored 1 year ago
  
  d2ea41f9
Oct 25, 2023
- Merged in server script and API · 0a8de9c8
  Christopher Randolph Rhodes authored 1 year ago
  
  0a8de9c8
Sep 25, 2023
- ilastik extension now manages its own API · 67e20ac1
  Christopher Randolph Rhodes authored 1 year ago
  
  67e20ac1
- Moved ilastik to its own extensions package · de6f2ecd
  Christopher Randolph Rhodes authored 1 year ago
  
  de6f2ecd
Sep 07, 2023
- Option to skip loading a model if its project file is already in a loaded one · fe4dda4f
  Christopher Randolph Rhodes authored 1 year ago
  
  fe4dda4f
Sep 05, 2023
- Implemented workflow and endpoint for two-stage (px -> ob) classification in... · b8635fdb
  Christopher Randolph Rhodes authored 1 year ago
  
  Implemented workflow and endpoint for two-stage (px -> ob) classification in ilastik; tests pass and image data is correct
  b8635fdb
- Consolidated ilastik model load API endpoints; report out error when loading project file · e5661bce
  Christopher Randolph Rhodes authored 1 year ago
  
  e5661bce
- Can now restart session by API with new data root · 6ce61a64
  Christopher Randolph Rhodes authored 1 year ago
  
  6ce61a64
- Reorganized default paths · 95c5c9fd
  Christopher Randolph Rhodes authored 1 year ago
  
  95c5c9fd
Sep 04, 2023
- Unfinished changes to automic simulator and testing 3D ilastik model · f36da7c8
  Christopher Randolph Rhodes authored 1 year ago
  
  f36da7c8
- Added endpoint to restart session, i.e. to clear loaded models · d09bdffb
  Christopher Randolph Rhodes authored 1 year ago
  
  d09bdffb
Sep 01, 2023
- Added endpoint and test to help debug argument passing · 30c94dd4
  Christopher Randolph Rhodes authored 1 year ago
  
  30c94dd4
Aug 31, 2023
- Can now load ilastik models by API · b9f27095
  Christopher Randolph Rhodes authored 1 year ago
  
  b9f27095
- Inference API now works again with dummy model · 2291d080
  Christopher Randolph Rhodes authored 1 year ago
  
  2291d080
- Session returns JSON-compliant model list · e147a54f
  Christopher Randolph Rhodes authored 1 year ago
  
  e147a54f
- Updated API for loading models but still need to makes some fixes for tests to pass · 3a7f41e0
  Christopher Randolph Rhodes authored 1 year ago
  
  3a7f41e0
Aug 30, 2023
- Stuck on type validation in test. def test_load_ilastik_model() · 9010a5a1
  Christopher Randolph Rhodes authored 1 year ago
  
  9010a5a1
- Added more reporting of inference and model-loading events · 2004c53a
  Christopher Randolph Rhodes authored 1 year ago
  
  2004c53a
- Pass stack trace of unhandled exceptions to response body · 2d3e0e87
  Christopher Randolph Rhodes authored 1 year ago
  
  2d3e0e87
Aug 29, 2023
- Updated test for channel selection, and conforming image data to XYCZ order · e3162d6b
  Christopher Randolph Rhodes authored 1 year ago
  
  e3162d6b
Aug 28, 2023
- Reconfigured inference endpoint as pure PUT; can now pass params to model inference method · 125847bc
  Christopher Randolph Rhodes authored 1 year ago
  
  125847bc
- Successfully tested calling inference over API · e2e7ea21
  Christopher Randolph Rhodes authored 1 year ago
  
  e2e7ea21
- Changed superclass of dummy model · d331f923
  Christopher Randolph Rhodes authored 1 year ago
  
  d331f923
- Implemented model-loading logic at session level · a29dc6bb
  Christopher Randolph Rhodes authored 1 year ago
  
  a29dc6bb
Aug 24, 2023
- Ignore pycache files · d7642645
  Christopher Randolph Rhodes authored 1 year ago
  
  d7642645
- Abstractified Model base class · f8dd4aa2
  Christopher Randolph Rhodes authored 1 year ago
  
  f8dd4aa2
- Extended pydantic data validation, evaluated output image in several tests · ca9709e6
  Christopher Randolph Rhodes authored 1 year ago
  
  ca9709e6
Aug 23, 2023
- Abstracted away inference logic from API, successfully tested · c73727c0
  Christopher Randolph Rhodes authored 1 year ago
  
  c73727c0
Aug 22, 2023
- Basic logic is drafted, completely untested · 3c3666b5
  Christopher Randolph Rhodes authored 1 year ago
  
  3c3666b5
- Initial commit · 8e940508
  Christopher Randolph Rhodes authored 1 year ago
  
  8e940508
- Initial commit · 32818f49
  Christopher Randolph Rhodes authored 1 year ago
  
  32818f49