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Created with Raphaël 2.2.03Jun30May22876326Apr1917151211109543229Mar2825222176429Feb282019157653226Jan259822Dec21201913Nov10763231Oct30272625222019181716141312111098529Sep2827262513127654131Aug302928Trying to complete meaningful test with both raw and derived channelsRoiSet can now return and export two-channel images as both TIFs and PNGsPNG export can handle two-channel data without error, appending blank blue channelCan handle and export arbitrary multi-channel patchesMerge branch 'issue_multiple_labels' into 'staging'Fixed underlying error when constructing RoiSets with no objectsTest covers issue creating an RoiSet with no ROI objectsRemoved test for handling multiple object labels in a patch, now that underlying cause of this problem has been fixedRelaxed requirements, conda env installs, still hitting some errors in testsMerge branch 'issue0038' into 'staging'Drop none-valued query parameters by defaultDrop none-valued query parameters by defaultMerge branch 'staging' into issue0038Merge branch 'issue0037' into 'staging'ilastik model loading now takes duplicate in request bodyMerge branch 'staging' into issue0037Pass model-associated request data in body, not queryPass model-associated request data in body, not queryMerge branch 'dev_connectivity_patch_obmaps' into 'staging'Specify connectivity of labelingAdded object method to write to and class method to read from fileMerge branch 'dev_allow_unpadded_patches' into 'staging'Allow None to certain int parametersMerge branch 'dev_ilastik_params_upon_loading' into 'staging'Expose gaussian blur in ilastik segmentation modelModels now generically use Pydyantic models for parameterizationilastik load endpoints now use Pydyantic modelsMoved project file into model.params; removed autogeneration of segmentation model from pixel predictions modelMerge branch 'dev_watershed_centroids' into 'staging'Added static constructor for making RoiSets from segmentation masksMerge branch 'dev_multichannel_ilastik' into 'staging'Removed in-progress RoiSet testilastik workflow now interprets channel=None to use all input channelsilastik workflow now interprets channel=None to use all input channelsilastik now allows multichannel inputsTest coverage of ilastik workflow and API endpoint that currently restricts multichannel inputsConfirms that ilastik pixel object already works with multichannel inputConfirms that ilastik pixel classification already works with multichannel inputRun pixel and object classification on ilastik projects' own inputsStable conversion to relpaths