Skip to content
Snippets Groups Projects
Select Git revision
  • 37-unnecessary-for-loop-in-rois-features
  • dev-nda-stream
  • dev-phenobase
  • dev_patch_viz
  • master default protected
  • migrate_model_server
  • staging protected
  • 2024.10.01
  • 2024.06.03
  • 2024.04.19
  • 2024.03.01
11 results
You can move around the graph by using the arrow keys.
Created with Raphaël 2.2.04Apr3229Mar2825222176429Feb282019157653226Jan259822Dec21201913Nov10763231Oct30272625222019181716141312111098529Sep2827262513127654131Aug302928242322Serialize after running other exports, as patch path is embedded in dataframe; write this with subdirectoryMerge branch 'use_relative_patch_paths' into 'staging'Changed name of path mask path columnMerge branch 'use_relative_patch_paths' into 'staging'Harmonize relative paths with exported dataframe, toorun_exports returns only relative paths to all productsMerge branch 'key_error_running_exports' into 'staging'Standardized that export record is a list of path strings, or nested list of the sameAddressed key error when merging in patch pathsPatch mask export also returns dataframe so that index is maintainedPatch export returns dataframe so that index is maintainedMerge branch 'issue0024' into 'staging'Removed pixel probabilities option from RoiSet exportsMerge branch 'issue0027-serialize-roiset' into 'staging'Merge branch 'revert-1851ba66' into 'master'Revert "Merge branch 'issue0027-serialize-roiset' into 'master'"Merge branch 'issue0027-serialize-roiset' into 'master'Fixed a few parameters in tests, confirmed all export products look the way they shouldFixed a few parameters in tests, confirmed all export products look the way they shouldPatch masks are the same after deserializationSerialization/deserialization tests passStill not showing equivalency between test and reference RoiSetsSerialization/deserialization leads to identical z-masksMove DataFrame and patch mask exports to .serialize()Exporting patch masks does not automatically make a PatchStack, which forces them to all be the same sizeAdded height, width fields for convenienceTest on expanded, padded patchesCorrectly export 3D patchesCorrectly export 3D patchesBy default, return non-expanded patches and masks; allow contour and mask overlays in non-expanded patchesStandardize patch (mask) getters return ad-hoc DataFrames, and _acc methods wrap these in PatchStack accessors (which automatically become shape of largest patch)Option to export non-expanded patchesReturn simple list of path objects instead of dictionariesslice object is now tight bounding box, expanded_slice is post-expansionForce export of dataset and patches; just need to override bounding box expansionNo longer export slice, relative_slice, and mask (all non-serialized) to CSV exportRolled back changes to how masks and slices are handled, but kept updated testsRoiSet init can now access both 2d and 3d segmentationsBroadcasting is work except in some cases that appear to coincide with truncation of ROI in patch boundsNow just running into broadcast errors, presumably on patch mask boundaries