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Created with Raphaël 2.2.05Feb4331Jan302928272422920Dec1814131110976530Nov2928272625222120191815141211109432131Oct3028272625222015141372130Sep2624232013126315Aug14131298752131Jul2624221817161585432124Jun2010765330May22Stopped using RoiSet as iteratorUse df.index for label in mapHarmonized column / index naming in serialization/deserializationjoin and drop calls are scrambling indexClassifications columns use MultiIndexUse .apply notation instead of .itertuplesChasing down errors with RoiSet multiindex tableStarted implementing multi index levels on RoiSet dataframe columnsprocess_2d operates on numpy arrays so needs to be aligned with accessor dimensionsMerge branch 'dev_phenobase' into 'staging'Repaired phenobase test validation of CSVCorrected error in mono methodaccessor.apply can send only YXZ data with mono=True flagaccessor.apply can take optional dictionary of params to pass to functoinPass complete RoiSetExportParams to add_roiset, not just the patchesAutomatically write phenobase CSV after an RoiSet is pushedEndpoint to generically add a RoiSet to PhenoBase is working and covered; would still like to add optional export products and test with multiple ROIsRemoved redundant TestCase that was redeclaredWrite patches to subdirectories by defaultDefault to no expansion of ROIsMoved roiset pipeline handler to same shared moduleAdded docstringsShared pipeline handler to register RoiSet into sessionAPI method to list entire phenobase tableMerge remote-tracking branch 'origin/dev_phenobase' into dev_phenobaseTest covers addition of zero-length RoiSetSession initializes and inserts into PhenoBaseSession initializes and inserts into PhenoBaseAdded method to initiate from RoiSet objectPhenoBase.push gets only patch parameters, not full export parametersRemoved table registration from SessionShared pipeline handler to register RoiSet into sessionPhenoBase validates uniqueness of RoiSet key.push method validates patch sets are specified in RoiSet export parametersTests cover RoiSet push still working out what to do when exporting patchesCan now index RoiSets by a dictionary of multiple entriesAdded test coverage of sampling methodNow moving to session and API hooks for phenobaseTest on phenobase update passesImplemented phenobase update method but not passing test yet