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Created with Raphaël 2.2.031Mar28272625242221201918171454314Feb131287654331Jan302928272422920Dec1814131110976530Nov2928272625222120191815141211109432131Oct3028272625222015141372130Sep2624232013126315AugMerge branch 'release-2025.03.01' into 'master'2025.03.01 master2025.03.01 masterpyproject file updates only, for releasedev-proj0024dev-proj0024Merge branch 'patch_square_roiset_product' into 'master'Two test-level changes with revised RoiSet coordinate keysStill trying to make expanded mask the right shapeError in indexingMerge remote-tracking branch 'origin/patch_square_roiset_product' into patch_square_roiset_productError in indexingError in indexingMask is not always 2d, this was causing errorsMask is not always 2d, this was causing errorsMerge branch 'dev-phenobase-client-coords' into 'master'Allow non-int coordinate in RoiSet filenamesAllow strings in roiset index, tooPhenoBase client passes coordinates to task body if specifiedMerge branch 'dev-phenobase-client' into 'master'Square bounding boxes test passesSquare bounding boxes now just replace expanded bounding boxesSquare bounding box is mostly implemented, no strictly square when at boundariesCorrected mistake in relative bounding boxes that was decentering patch masks when expandedPatch masks are expanded, just not centeredNo need for warning nowRoiSet constructor enforces at least 2 x 2 (h x w) ROIsAutowrite phenobase.csv everytime a RoiSet is pushedMaintain int types when writing phenobase dataframePhenoBase table was written to session folder, client now properly sets this to output folderMerge branch 'dev-phenobase' into 'master'Test pipeline thresholds on channel 1 nowWrote docstrings and cleaned up return typesDo not verify optional modelsAssertions cover exported patches organized by classificationCan write single-tif patch stacks by classification categoryTestAddRoiSetOverApi.test_add_roiset now uses labeling parameter to get an RoiSet with > 1 ROIPrototyped method to write patches in subdirectories by classification name and classTest asserts that a patch is writtenClient writes PhenoBase data to the correct locationSet up RoiSet export endpoint in PhenoBase batch job, but not yet passingSet up RoiSet export endpoint in PhenoBase batch job, but not yet passingMinor corrections during unittestingRemoved filter and chroma methods