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Created with Raphaël 2.2.028Mar25222176429Feb282019157653226Jan259822Dec21201913Nov10763231Oct30272625222019181716141312111098529Sep2827262513127654131Aug302928242322Passes, long warnings that convex hull calcs don't workImplementing alternative dataframe generation where z-positions are in object map, i.e. do not need to be de-projected from rawImplemented and tested object identity labeling in 3D with and without connectivity between z-framesTest coverage with 3D object identities mapBypass init with factory method that takes 2d object identities mapMerge branch 'roiset_api' into 'staging'Revert "Temporary error-handling for debug..."Temporary error-handling for debug...Stopped assuming that object is identified in patchParameterize reload to command line optionParameterize reload to command line optionReload False by default, just to be conservativeParameterize auto-reload and deactivate daemon accordinglyEnable uvicorn reload by defaultChanged text of warningsChanged text of warningsTesting server verification...Added method to verify server is upAdded method to verify server is upMerge branch 'persist_roiset_data' into 'staging'Added generic persistent table functionality to SessionMerge branch 'patch_stack_one_channel' into 'staging'RoiSet now classifies objects on a patch basis via .label_patch_stack methodImprove normalization when generating instance segmentation modelMerge branch 'patch_stack_one_channel' into 'staging'Correct error when trying to extract a single channel from a PatchStackMerge branch 'ilastik_px_predictions_to_instance_seg' into 'staging'Generate an InstanceSegmentationModel from an IlastikObjectClassifierFromPixelPredictionsModel given binarization parametersMerge branch 'ilastik_model_validation' into 'staging'Set default values for time, color, and z-axes in ilastik model validationMerge branch '4-events-are-not-logged-to-session-manifest' into 'staging'Merge branch '1-ilastik-models-do-not-validate-dimensionality-of-input-data' into 'staging'Removed manifest JSON from sessionReport out session logs on APIMoved session restart endpointLogged ilastik eventsRemoved JSON manifest file, logged summaries to logging service insteadChanged log entry formattingCleaned up testsMerge branch 'issue0017' into expose_session_logs_in_api