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ALMF
SVLT
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f9f8621180a9dd5e837b3f62f1e0d066e03752ec
Select Git revision
Branches
6
37-unnecessary-for-loop-in-rois-features
dev-nda-stream
dev_patch_viz
master
default
protected
migrate_model_server
staging
protected
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4
2024.10.01
2024.06.03
2024.04.19
2024.03.01
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Created with Raphaël 2.2.0
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PhenoBase tests pass
Looking to classifications grouping for labels
Cleaned up coordinate indexing of RoiSets in PhenoBase
RoiSet tests pass on multiindex refactor
Need to set using bracket notation in multiindex columns
Refactoring to multiindex on annotators, etc.
Updating to multiindex references
Updating to multiindex references
Stopped using RoiSet as iterator
Use df.index for label in map
Harmonized column / index naming in serialization/deserialization
join and drop calls are scrambling index
Classifications columns use MultiIndex
Use .apply notation instead of .itertuples
Chasing down errors with RoiSet multiindex table
Started implementing multi index levels on RoiSet dataframe columns
process_2d operates on numpy arrays so needs to be aligned with accessor dimensions
Merge branch 'dev_phenobase' into 'staging'
Repaired phenobase test validation of CSV
Corrected error in mono method
accessor.apply can send only YXZ data with mono=True flag
accessor.apply can take optional dictionary of params to pass to functoin
Pass complete RoiSetExportParams to add_roiset, not just the patches
Automatically write phenobase CSV after an RoiSet is pushed
Endpoint to generically add a RoiSet to PhenoBase is working and covered; would still like to add optional export products and test with multiple ROIs
Removed redundant TestCase that was redeclared
Write patches to subdirectories by default
Default to no expansion of ROIs
Moved roiset pipeline handler to same shared module
Added docstrings
Shared pipeline handler to register RoiSet into session
API method to list entire phenobase table
Merge remote-tracking branch 'origin/dev_phenobase' into dev_phenobase
Test covers addition of zero-length RoiSet
Session initializes and inserts into PhenoBase
Session initializes and inserts into PhenoBase
Added method to initiate from RoiSet object
PhenoBase.push gets only patch parameters, not full export parameters
Removed table registration from Session
Shared pipeline handler to register RoiSet into session
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