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Reformat the CI/CD into two Jbrowse2 steps
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# Stage 1: Jbrowse config file generated
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More json edits  
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FROM quay.io/biocontainers/jbrowse2:2.15.3--hbbc3ce4_0
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Reformat the CI/CD into two Jbrowse2 steps
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WORKDIR /app
COPY jbrowse_script_base.sh .
RUN ./jbrowse_script_base.sh