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assembly,trackID,name,type,category,description,path,is_text_index
pmassv1_masked,annotation,Gene models,GTF,Annotation,Kevin's GTF file,/g/arendt/data/platynereis_massiliensis/genes/pmassv1.gtf,TRUE
cyril.cros's avatar
Squashing origin/next_work into dev  
cyril.cros committed
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pmassv1_masked,emapper,EMAPPER models,GFF,Annotation,Kevin's GFF file from EMAPPER,/g/arendt/data/platynereis_massiliensis/proteome/annotation/pmassv1_EMAPPER.gff,FALSE
Cyril Christophe Daniel Robert Cros's avatar
Updating tracks
Cyril Christophe Daniel Robert Cros committed
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pdumv021,annotation,Gene models,GTF,Annotation,Kevin's GTF file,/g/arendt/data/genome_assemblies/pdum-v2.1/genes/pdumv021.gtf,TRUE
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Squashing origin/next_work into dev  
cyril.cros committed
5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 
pdumv021,emapper,EMAPPER models,GFF,Annotation,Kevin's GFF file from EMAPPER,/g/arendt/data/genome_assemblies/pdum-v2.1/proteome/annotation/pdumv021_EMAPPER.emapper.gff,FALSE
pdumv021,SN035_vcf,SN035,VCF,Variants,Tobi's variants,/g/arendt/gerber/Processed_Files/Variants_PlanetaryBiology/Variants_SN035.vcf,FALSE
pdumv021,SN054_vcf,SN054,VCF,Variants,Tobi's variants,/g/arendt/gerber/Processed_Files/Variants_PlanetaryBiology/Variants_SN054.vcf,FALSE
pdumv021,SN055_vcf,SN055,VCF,Variants,Tobi's variants,/g/arendt/gerber/Processed_Files/Variants_PlanetaryBiology/Variants_SN055.vcf,FALSE
pdumv021,SN056_vcf,SN056,VCF,Variants,Tobi's variants,/g/arendt/gerber/Processed_Files/Variants_PlanetaryBiology/Variants_SN056.vcf,FALSE
pdumv021,SN057_vcf,SN057,VCF,Variants,Tobi's variants,/g/arendt/gerber/Processed_Files/Variants_PlanetaryBiology/Variants_SN057.vcf,FALSE
pdumv021,SN058_vcf,SN058,VCF,Variants,Tobi's variants,/g/arendt/gerber/Processed_Files/Variants_PlanetaryBiology/Variants_SN058.vcf,FALSE
pdumv021,SN001_vcf,SN001,VCF,Variants,Tobi's variants,/g/arendt/gerber/Processed_Files/Variants_Atlas/Variants_Libs/Variants_SN001.vcf,FALSE
pdumv021,SN002_vcf,SN002,VCF,Variants,Tobi's variants,/g/arendt/gerber/Processed_Files/Variants_Atlas/Variants_Libs/Variants_SN002.vcf,FALSE
pdumv021,SN003_vcf,SN003,VCF,Variants,Tobi's variants,/g/arendt/gerber/Processed_Files/Variants_Atlas/Variants_Libs/Variants_SN003.vcf,FALSE
pdumv021,SN004_vcf,SN004,VCF,Variants,Tobi's variants,/g/arendt/gerber/Processed_Files/Variants_Atlas/Variants_Libs/Variants_SN004.vcf,FALSE
pdumv021,SN015_vcf,SN015,VCF,Variants,Tobi's variants,/g/arendt/gerber/Processed_Files/Variants_Atlas/Variants_Libs/Variants_SN015.vcf,FALSE
pdumv021,SN016_vcf,SN016,VCF,Variants,Tobi's variants,/g/arendt/gerber/Processed_Files/Variants_Atlas/Variants_Libs/Variants_SN016.vcf,FALSE
pdumv021,SN018_vcf,SN018,VCF,Variants,Tobi's variants,/g/arendt/gerber/Processed_Files/Variants_Atlas/Variants_Libs/Variants_SN018.vcf,FALSE
pdumv021,SN019_vcf,SN019,VCF,Variants,Tobi's variants,/g/arendt/gerber/Processed_Files/Variants_Atlas/Variants_Libs/Variants_SN019.vcf,FALSE
pdumv021,SN020_vcf,SN020,VCF,Variants,Tobi's variants,/g/arendt/gerber/Processed_Files/Variants_Atlas/Variants_Libs/Variants_SN020.vcf,FALSE
pdumv021,SN021_vcf,SN021,VCF,Variants,Tobi's variants,/g/arendt/gerber/Processed_Files/Variants_Atlas/Variants_Libs/Variants_SN021.vcf,FALSE
pdumv021,SN028_vcf,SN028,VCF,Variants,Tobi's variants,/g/arendt/gerber/Processed_Files/Variants_Atlas/Variants_Libs/Variants_SN028.vcf,FALSE
pdumv021,SN029_vcf,SN029,VCF,Variants,Tobi's variants,/g/arendt/gerber/Processed_Files/Variants_Atlas/Variants_Libs/Variants_SN029.vcf,FALSE
pdumv021,SN030_vcf,SN030,VCF,Variants,Tobi's variants,/g/arendt/gerber/Processed_Files/Variants_Atlas/Variants_Libs/Variants_SN030.vcf,FALSE
pdumv021,SN031_vcf,SN031,VCF,Variants,Tobi's variants,/g/arendt/gerber/Processed_Files/Variants_Atlas/Variants_Libs/Variants_SN031.vcf,FALSE
pdumv021,library_bam_1,Library 1,BAM,ATACseq,Lara's Snakemake outputs,/g/arendt/Lara/8.FinalOutput/1.final.bam,FALSE
pdumv021,library_bam_2,Library 2,BAM,ATACseq,Lara's Snakemake outputs,/g/arendt/Lara/8.FinalOutput/2.final.bam,FALSE
pdumv021,library_bam_3,Library 3,BAM,ATACseq,Lara's Snakemake outputs,/g/arendt/Lara/8.FinalOutput/3.final.bam,FALSE
pdumv021,library_bam_4,Library 4,BAM,ATACseq,Lara's Snakemake outputs,/g/arendt/Lara/8.FinalOutput/4.final.bam,FALSE
pdumv021,library_bam_5,Library 5,BAM,ATACseq,Lara's Snakemake outputs,/g/arendt/Lara/8.FinalOutput/5.final.bam,FALSE
pdumv021,library_bigwig_1,Library 1,BigWig,ATACseq,Lara's Snakemake outputs,/g/arendt/Lara/8.FinalOutput/1.final.bigwig,FALSE
pdumv021,library_bigwig_2,Library 2,BigWig,ATACseq,Lara's Snakemake outputs,/g/arendt/Lara/8.FinalOutput/2.final.bigwig,FALSE
pdumv021,library_bigwig_3,Library 3,BigWig,ATACseq,Lara's Snakemake outputs,/g/arendt/Lara/8.FinalOutput/3.final.bigwig,FALSE
pdumv021,library_bigwig_4,Library 4,BigWig,ATACseq,Lara's Snakemake outputs,/g/arendt/Lara/8.FinalOutput/4.final.bigwig,FALSE
pdumv021,library_bigwig_5,Library 5,BigWig,ATACseq,Lara's Snakemake outputs,/g/arendt/Lara/8.FinalOutput/5.final.bigwig,FALSE
pdumv021,SN073_15ng_collapsed,SN073 MASseq isoforms from the 15ng prep,GFF,MASseq,MASseq outputs from running isoseq collapse against the Pdum genome,/scratch/cros/MASseq_output_new/SN073/collapsed.gff,FALSE
pdumv021,SN073_60ng_collapsed,SN073 MASseq isoforms,GFF,MASseq,MASseq outputs from running isoseq collapse against the Pdum genome,/scratch/cros/MASseq_output_new/SN073_60ng/collapsed.gff,FALSE