test this now

.gitlab-ci.yml

@@ -52,6 +52,7 @@ kustomize_build_apply:
     - envsubst < deployment/jbrowse2-dep.tmpl > deployment/jbrowse2-dep.yaml
     - kubectl apply -k deployment
     - kubectl -n $NS wait --for=condition=available --timeout=60s deploy/jbrowse2
+    - kubectl -n $NS rollout status deployment/jbrowse2
   dependencies:
     - cluster_access_test
 

image/jbrowse_script.sh

@@ -3,5 +3,5 @@
 jbrowse create annelids
 cd annelids
 jbrowse add-assembly https://s3.embl.de/annelids/pdumv021/pdumv021_genome.fa.gz --name pdumv021
-jbrowse add-track https://s3.embl.de/annelids/pdumv021/pdumv021.sorted.gff.gz -d "Kevin pdumv021 GTF file" -n "Genes models" --category "Annotations"
+jbrowse add-track https://s3.embl.de/annelids/pdumv021/pdumv021.gff.gz -d "Kevin pdumv021 GTF file" -n "Genes models" --category "Annotations"
 jbrowse add-track https://s3.embl.de/annelids/pdumv021/transdecoder.gff.gz -d "Kevin runs transdecoder" -n "Transdecoder results" --category "Annotations"