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Commit 396b5efc authored by Holger Dinkel's avatar Holger Dinkel
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BUGFIX: missing line to initialize code block ('::')

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...@@ -207,6 +207,7 @@ You can use transliteration to replace all instances of a character with another ...@@ -207,6 +207,7 @@ You can use transliteration to replace all instances of a character with another
For example, to switch Thymines to Uridines in a sequence: For example, to switch Thymines to Uridines in a sequence:
:: ::
# echo "AGTGGCTAAGTCCCTTTAATCAGG" | sed 'y/T/U/' # echo "AGTGGCTAAGTCCCTTTAATCAGG" | sed 'y/T/U/'
AGUGGCUAAGTCCCUUUAAUCAGG AGUGGCUAAGTCCCUUUAAUCAGG
...@@ -215,6 +216,7 @@ with the character in the equivalent position in the second set. For example, t ...@@ -215,6 +216,7 @@ with the character in the equivalent position in the second set. For example, t
reverse transcript of a DNA sequence: reverse transcript of a DNA sequence:
:: ::
# echo "AGTGGCTAAGTCCCTTTAATCAGG" | sed 'y/ACGT/UGCA/' # echo "AGTGGCTAAGTCCCTTTAATCAGG" | sed 'y/ACGT/UGCA/'
UCACCGAUUCAGGGAAAUUAGUCC UCACCGAUUCAGGGAAAUUAGUCC
...@@ -222,6 +224,7 @@ This is the complementary sequence, but we wanted the reverse complement, so we ...@@ -222,6 +224,7 @@ This is the complementary sequence, but we wanted the reverse complement, so we
the Linux command ``rev`` to reverse the output of the ``sed`` command: the Linux command ``rev`` to reverse the output of the ``sed`` command:
:: ::
# echo "AGTGGCTAAGTCCCTTTAATCAGG" | sed 'y/ACGT/UGCA/' | rev # echo "AGTGGCTAAGTCCCTTTAATCAGG" | sed 'y/ACGT/UGCA/' | rev
CCUGAUUAAAGGGACUUAGCCACU CCUGAUUAAAGGGACUUAGCCACU
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