Add a minimal SIMD-accelerated FASTA parser for tests and CLI (41cfdf1b) · Commits · Martin Larralde / PyFastANI · GitLab

Skip to content

GitLab

Explore

Sign in

Primary navigation

Project

PyFastANI
- Activity
- Members
- Labels
- Issues
- Issue boards
- Milestones
- Wiki
- Environments
- Terraform modules
- Incidents
- Service Desk

Snippets Groups Projects

41cfdf1b

Commit 41cfdf1b authored 3 years ago by Martin Larralde

Downloads
- Patches
- Plain Diff

Add a minimal SIMD-accelerated FASTA parser for tests and CLI

parent 6f8d7676

No related branches found

No related tags found

No related merge requests found

Changes 5

Hide whitespace changes

Inline Side-by-side

Showing

pyfastani/_fasta.pyx 100 additions, 0 deletions

pyfastani/_fasta.pyx
pyfastani/_simd.c 87 additions, 0 deletions

pyfastani/_simd.c
pyfastani/_simd.h 21 additions, 0 deletions

pyfastani/_simd.h
pyfastani/_simd.pxd 2 additions, 0 deletions

pyfastani/_simd.pxd
setup.py 19 additions, 12 deletions

setup.py

with 229 additions and 12 deletions

Loading

0% Loading or .

You are about to add 0 people to the discussion. Proceed with caution.

Finish editing this message first!

Please register or sign in to comment