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Commit 8a26c517 authored by Martin Larralde's avatar Martin Larralde
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Add default values of `DigitalMSA.identity_filter` to `easel.pyi`

parent b0cd0e1b
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......@@ -446,14 +446,15 @@ class DigitalMSA(MSA):
def identity_filter(
self,
max_identity: float = 0.8,
fragment_threshold: float = ...,
consensus_fraction: float = ...,
ignore_rf: bool = ...,
sample: bool = ...,
sample_threshold: int = ...,
sample_count: int = ...,
max_fragments: int = ...,
seed: int = ...,
*,
fragment_threshold: float = 0.5,
consensus_fraction: float = 0.5,
ignore_rf: bool = False,
sample: bool = True,
sample_threshold: int = 50000,
sample_count: int = 10000,
max_fragments: int = 5000,
seed: int = 42,
preference: IDENTITY_FILTER_PREFERENCE = "conscover",
) -> DigitalMSA: ...
......
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