Commits · f37361ee40bbdac0aa45363eb354e3528126f1a8 · Martin Larralde / PyHMMER · GitLab

Snippets Groups Projects

Oct 22, 2023
- Use `importlib.resources` to get test data instead of `pkg_resources` · c05c7d8f
  Martin Larralde authored 1 year ago
  
  c05c7d8f
Oct 04, 2023
- Add CI configuration for Python 3.12 · 2ec2e67b
  Martin Larralde authored 1 year ago
  
  2ec2e67b
Aug 16, 2023
- Update macro definitions for HMMER v3.4 and Easel v0.49 in `setup.cfg` · eff44219
  Martin Larralde authored 1 year ago
  
  eff44219
Aug 02, 2023
- Bump Cython build dependency to `v3.0` · fb40facd
  Martin Larralde authored 1 year ago
  
  fb40facd
Apr 30, 2023
- Add `CITATION.cff` file with application note DOI [ci skip] · 5be2acfe
  Martin Larralde authored 1 year ago
  
  5be2acfe
Dec 04, 2022
- Release v0.7.0 · 373075f8
  Martin Larralde authored 2 years ago
  
  v0.7.0
  
  373075f8
Dec 01, 2022
- Fix list of packages included in `setup.cfg` · fa0ffddb
  Martin Larralde authored 2 years ago
  
  fa0ffddb
Nov 30, 2022
- Update `coverage` configuration in `setup.cfg` to also report pure Python files · be6a662e
  Martin Larralde authored 2 years ago
  
  be6a662e
Apr 20, 2022
- Add type stubs for `pyhmmer.daemon` and fix remaining `mypy` errors · 6e716e33
  Martin Larralde authored 2 years ago
  
  6e716e33
Dec 13, 2021
- Add CI configuration to test and package for Python 3.10 · 66c32e8a
  Martin Larralde authored 3 years ago
  
  66c32e8a
Jul 01, 2021
- Make `python setup.py configure` actually check compiler supports SSE or VMX · 508d149c
  Martin Larralde authored 3 years ago
  
  508d149c
Jan 29, 2021
- Add more project URLs to `setup.cfg` [ci skip] · ed0fc493
  Martin Larralde authored 4 years ago
  
  ed0fc493
Jan 20, 2021
- Use `psutil` to detect the thread count for `phmmer` and `hmmsearch` · 6c85dd93
  Martin Larralde authored 4 years ago
  
  6c85dd93
Jan 07, 2021
- Remove Python 3.5 from supported versions in `setup.cfg` · 618bee48
  Martin Larralde authored 4 years ago
  
  618bee48
Dec 01, 2020
- Release v0.1.0 · b901c93b
  Martin Larralde authored 4 years ago
  
  v0.1.0
  
  b901c93b
Nov 28, 2020
- Fix invalid license classifier in `setup.cfg` · 54994444
  Martin Larralde authored 4 years ago
  
  54994444
Nov 27, 2020
- Update Easel to `v0.48` and HMMER to `v3.3.2` · 46bba3d8
  Martin Larralde authored 4 years ago
  
  46bba3d8
- Add link to the Zenodo page in `setup.cfg` [ci skip] · d7869ebc
  Martin Larralde authored 4 years ago
  
  d7869ebc
Nov 24, 2020
- Fix PyPI listing license as GPLv3 instead of MIT [ci skip] · 6bfd0c35
  Martin Larralde authored 4 years ago
  
  6bfd0c35
- Add Python 3.9 to supported versions and Travis-CI deployments · 28fe49c3
  Martin Larralde authored 4 years ago
  
  28fe49c3
Nov 12, 2020
- Add typing marker to the package distribution and metadata · 6f0077af
  Martin Larralde authored 4 years ago
  
  6f0077af
- Add untestable error patterns to ignored coverage lines in `setup.cfg` · 47dd337d
  Martin Larralde authored 4 years ago
  
  47dd337d
Nov 11, 2020
- Implement `autoconf`-style command in `setup.py` to generate C headers · c1467e49
  Martin Larralde authored 4 years ago
  
  c1467e49
Nov 10, 2020
- Change development status to Alpha in `setup.cfg` [ci skip] · e6213eba
  Martin Larralde authored 4 years ago
  
  e6213eba
- Add missing test suite configuration value to `setup.cfg` · 3d16b657
  Martin Larralde authored 4 years ago
  
  3d16b657
Nov 02, 2020
- Make sure to build C libs in debug mode in CI · a34fa732
  Martin Larralde authored 4 years ago
  
  a34fa732
- Add `MANIFEST.in` file to bundle source files in `sdist` · a2d79420
  Martin Larralde authored 4 years ago
  
  a2d79420
Nov 01, 2020
- Rename to `pyhmmer` to avoid conflict with EBI-Metagenomics/hmmer · e093d9df
  Martin Larralde authored 4 years ago
  
  e093d9df
Oct 31, 2020
- Fix path to modules in `setup.cfg` · 51f462bc
  Martin Larralde authored 4 years ago
  
  51f462bc
Oct 30, 2020
- Tag project to be compatible only with POSIX platforms in `setup.cfg` · da83c15b
  Martin Larralde authored 4 years ago
  
  da83c15b
- Add setuptools configuration files with Cython support · eca38e33
  Martin Larralde authored 4 years ago
  
  eca38e33