Commits · a082f5b64a68d0dbd5ce0c32643ffb48ba744136 · Kimberly Isobel Meechan / platy-browser-data · GitLab

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Jul 08, 2019
- Update prospr segmented regions · a082f5b6
  Constantin Pape authored 5 years ago
  
  a082f5b6
- Automatic platy browser update · b336445d
  Constantin Pape authored 5 years ago
  
  0.1.1
  
  b336445d
Jul 07, 2019
- Add cilia segmentation data · b92f1e23
  Constantin Pape authored 5 years ago
  
  0.1.0
  
  b92f1e23
- Copy segment id lut when copying segmentation xml · d9a5b411
  Constantin Pape authored 5 years ago
  
  d9a5b411
Jul 06, 2019
- Add export scripts for cilia segmentation · f634feca
  Constantin Pape authored 5 years ago
  
  f634feca
- Automatic platy browser update · 9ca8db04
  Constantin Pape authored 5 years ago
  
  0.0.1
  
  9ca8db04
- Add scripts to copy tables · 72dfb368
  Constantin Pape authored 5 years ago
  
  72dfb368
Jun 30, 2019
- Implement anchor correction · 1c8e755e
  Constantin Pape authored 5 years ago
  
  1c8e755e
- Fix several issues in update_platy_browser · 886241a6
  Constantin Pape authored 5 years ago
  
  886241a6
Jun 29, 2019
- Restrict numpy threads for morphology extraction · 33bcbdb4
  Constantin Pape authored 5 years ago
  
  33bcbdb4
Jun 27, 2019
- Merge branch 'dev' of https://git.embl.de/tischer/platy-browser-tables into dev · 950f116b
  Constantin Pape authored 5 years ago
  
  0.0.0
  
  950f116b
- Add segmented prospr regions to region attributes and adapt muscle mapping · 4816b25e
  Constantin Pape authored 5 years ago
  
  4816b25e
- Add segmented prospr regions to initial version and copy scripts · 07f762e0
  Constantin Pape authored 5 years ago
  
  07f762e0
- Add segmented prospr regions · e374895d
  Constantin Pape authored 5 years ago
  
  e374895d
- Add prospr directory · 09b2f9b6
  Constantin Pape authored 5 years ago
  
  09b2f9b6
Jun 21, 2019
- Add test for region attributes · 36796d67
  Constantin Pape authored 5 years ago
  
  36796d67
- Fix name issues in attribute scripts · ce5d435b
  Constantin Pape authored 5 years ago
  
  ce5d435b
- Change to ne file-paths in tests · 14fb24f4
  Constantin Pape authored 5 years ago
  
  14fb24f4
- Add bookmarks.json to misc data · 635f6c74
  Constantin Pape authored 5 years ago
  
  635f6c74
- Use new segmentation names in update script · 34b3a563
  Constantin Pape authored 5 years ago
  
  34b3a563
- Finish file renaming and update scripts · 8a1e833c
  Constantin Pape authored 5 years ago
  
  8a1e833c
- Merge branch 'dev' of https://git.embl.de/tischer/platy-browser-tables into dev · b76d9761
  Constantin Pape authored 5 years ago
  
  b76d9761
- Implemnt file renaming WIP · 423233da
  Constantin Pape authored 5 years ago
  
  423233da
- Update README.md · 7eb7b7b7
  Constantin Pape authored 5 years ago
  
  7eb7b7b7
- Add bigdataserver file · d8fcd34f
  Constantin Pape authored 5 years ago
  
  d8fcd34f
- Add test helper file · d541b89f
  Constantin Pape authored 5 years ago
  
  d541b89f
Jun 20, 2019
- Add all MED files · a37678aa
  Constantin Pape authored 5 years ago
  
  a37678aa
- Add cell region script and table · 4202df6b
  Constantin Pape authored 5 years ago
  
  4202df6b
- Add (binary) muscle segmentation and tissue segmentation · c96105a9
  Constantin Pape authored 5 years ago
  
  c96105a9
Jun 13, 2019
- Skip invalid labels in morphology computation instead of placeholder features · 408c9dad
  Constantin Pape authored 5 years ago
  
  408c9dad
- Recompute tables to fix issues in morphology computation · dd94a972
  Constantin Pape authored 5 years ago
  
  dd94a972
- Merge branch 'morphp' into 'dev' · eba5ba63
  Constantin Pape authored 5 years ago
  
  Wrap morphology calculation in cluster task; parallelize it See merge request tischer/platy-browser-tables!1
  eba5ba63
- Wrap morphology calculation in cluster task; parallelize it · 224f2ea2
  Constantin Pape authored 5 years ago
  
  224f2ea2
Jun 12, 2019
- Wrap gene expression in cluster task; vectorize and parallelize computation · 2aa06f51
  Constantin Pape authored 5 years ago
  
  2aa06f51
- Simplify cell property calculation for gene attributes · 7ddc3228
  Constantin Pape authored 5 years ago
  
  7ddc3228
Jun 11, 2019
- Add morphology tables · 66c67a78
  Constantin Pape authored 5 years ago
  
  66c67a78
- Add test for morphology attributes · eddbc834
  Constantin Pape authored 5 years ago
  
  eddbc834
- Refactor morphology functions and simplify bounding box calculation · fe2a9c01
  Constantin Pape authored 5 years ago
  
  fe2a9c01
- Correct default tables · 77239a84
  Constantin Pape authored 5 years ago
  
  77239a84
- Fix bug in base attributes · 560d3cea
  Constantin Pape authored 5 years ago
  
  560d3cea