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  • 29-deserialization-can-lead-to-disconnected-objects
  • 30-ilastik-model-classes-preclude-multiple-channels
  • 32-roiset-patch-exports-don-t-support-multiple-specified-channels
  • 36-roiset-creation-may-error-when-created-with-blank-label-map
  • 37-422-when-loading-ilastik-model-from-imagej-client
  • 38-imagej-client-is-forced-to-specify-a-single-channel
  • 48-pipeline-router-circular-import-error
  • 50-running-scripts-run_server-from-command-line-raises-errors
  • 64-long-compute-time-blocks-pipeline-requests
  • 7-composing-pipelines-can-be-convoluted-with-accessor-class
  • 73-batch-runner-scrambles-stack-index
  • 78-task-timer-results-in-batch-jobs
  • build-2024.06.03
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  • chaeo_pipeline
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  • dev-proj0024-exp0005
  • dev_boundary_seg_pipeline
  • dev_conda_build
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  • 2025.02.01
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Created with Raphaël 2.2.03Sep15Aug14131298752131Jul2624221817161585432124Jun22212010765330May2217876326Apr1917151211109543229Mar2825222176429Feb282019157653226Jan259822Dec21201914Nov1310763231OctRoughed in optional to compare overlaps between two DataFrames, pathway to transferring classification labelsAdded option to remove all accessorsAPI maps RoiSet products as accessorsRoiSet can also return ordered dictionary of its export products as accessorsmodel can report its own nameserver start script call configuration module that resolves routing dynamicallyRoiSet workflows also use hierarchical routingImplemented hierarchical routingRenamed ._unique to .uniquecleaned up commentsall roiset_obmap tests passworkflow test passes with nontrivial RoiSetFixed bug where empty RoiSet throws error when calling classify_byAdded second segmentation pipeline with specific z-stack processingAdded mip convenience functionConsolidated shared methods and classes in one moduleException subclasses originate from pipeline utilSimplify pipeline callPut simplest functional RoiSet pipeline model_server for now; derived channel and boundary seg alternatives in trec-adaptive-feedbackShortcut when initializing PipelineTraceMoved boundary pipeline calls to trec-adaptive-feedback from nowdocstrings onlySeparated out derived channel functionality from main RoiSet class and testsTest covers derived inputs pipeline method directlyConsolidate some testing methodsConsolidated some recurring steps in API testingSuccessful test calling RoiSet workflow over APIwrite_accessor returns filename, not pathExpose method to get dataframe in a format that is JSON-serializableStill wiring up API router....Server starts; needed to remove old app routing from test class. Loading a real object classifier instead of dummy.Getting server errorsFirst test passes on direct pipeline call with accessorsWork in progress: translating RoiSet workflow from trec-adapative-feedbackRemoved YOLOv8 wrappers; delintCan read accessor from file with name in path itselfilastik tests passNo longer assume that accessor_id and model_id are the defaultsTest passes on ilastik pipelineStill adapting ilastik pipeline test
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