model_server
model_server implement image analysis jobs for online use (e.g. in feedback microscopy), including adapters to ilastik
Installation on Windows
- Install Git:
https://git-scm.com/download/win - Install Miniforge for environment management:
https://github.com/conda-forge/miniforge/releases/latest/download/Miniforge-pypy3-Windows-x86_64.exe - Under the Start menu, open
Miniforge3 > Miniforge Prompt - In the new terminal, run:
cd %userprofile%
git clone https://almf-staff:KJmFvyPRbpzoVZDqfMzV@git.embl.de/rhodes/model_server.git - Open the newly created project root:
cd model_server - Create the environment:
mamba create -n model_server_env --override-channels -c pytorch -c ilastik-forge -c conda-forge ilastik - In the same terminal, run:
mamba init - Now close and re-open the terminal:
Miniforge3 > Miniforge Prompt - Now activate the environment:
mamba activate model_server_env