model_server
model_server implement image analysis jobs for online use (e.g. in feedback microscopy), including adapters to ilastik
Installation on Windows
- Install Git:
https://git-scm.com/download/win - Install Miniforge for environment management:
https://github.com/conda-forge/miniforge/releases/latest/download/Miniforge-pypy3-Windows-x86_64.exe - Under the Start menu, open
Miniforge3 > Miniforge Prompt
- In the new terminal, run:
cd %userprofile%
git clone https://almf-staff:KJmFvyPRbpzoVZDqfMzV@git.embl.de/rhodes/model_server.git
- Open the newly created project root:
cd model_server
- Create the environment:
mamba env create --file requirements.yml --name model_server_env
- Activate the environment:
mamba activate model_server_env