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model_server

model_server implement image analysis jobs for online use (e.g. in feedback microscopy), including adapters to ilastik

Installation on Windows

  1. Install Git:
    https://git-scm.com/download/win
  2. Install Miniforge for environment management:
    https://github.com/conda-forge/miniforge/releases/latest/download/Miniforge-pypy3-Windows-x86_64.exe
  3. Under the Start menu, open Miniforge3 > Miniforge Prompt
  4. In the new terminal, run:
    cd %userprofile%
    git clone https://almf-staff:KJmFvyPRbpzoVZDqfMzV@git.embl.de/rhodes/model_server.git
  5. Open the newly created project root: cd model_server
  6. Create the environment: mamba env create --file requirements.yml --name model_server_env
  7. Activate the environment: mamba activate model_server_env

Examples