Merge branch 'master' of https://git.embl.de/tischer/platy-browser-tables

README.md

@@ -122,11 +122,16 @@ In addition to the data, the scripts for generating registration and producing d
 ### Registration
 
 The folder `registration` contains:
-A folder called transfer_ProSPr_data. This folder contains the scripts needed to copy and process the ProSPr output to 
+- `transfer_ProSPr_data`. This folder contains the scripts needed to copy and process the ProSPr output to 
 '/g/arendt/EM_6dpf_segmentation/platy-browser-data/data/rawdata/prospr'.
 It reads the .tif files that will be registered to the EM (e.g. MEDs, tissue manual segmentations, reference),
 mirrors them in x axis, adds size information (0.55um/px), and deals with gene names.
-run it in the cluster: sbatch ./ProSPr_copy_and_mirror.sh
+run it in the cluster:
+```
+sbatch ./ProSPr_copy_and_mirror.sh
+```
+
+- `ProSPr_files_for_registration`. The three files to guide the transformation of prospr space into the EM.
 
 ### Segmentation